Displaying data sets 104301 - 104400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G39420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.33174'
Avg. embryo expression (LCM): '0'
AT2G39420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.7826 x 10-2 4 0 0 9 100.00% 100.00% 4 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.021073'
Avg. expression score for this sample: '21.2347'
Avg. expression score in LCM sample: '1.20523'
Tissue used: 'full endosperm'
AT2G39420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.021073'
Avg. expression score for this sample: '8.30822'
Avg. expression score in LCM sample: '1.20523'
Tissue used: 'pure endosperm, no chalazal'
AT2G39420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 120 1 99.17% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39415 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39415 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G39415 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.86216'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G39415 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39415 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G39415 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.31606'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G39410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G39410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.47083'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G39410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8809 x 10-2 1912 21 98.91% 1933 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.1 x 10-25 134 3 2 137 97.81% 98.56% 137 139 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '155.05'
Avg. expression score in LCM sample: '6.18782'
Tissue used: 'pure endosperm, no chalazal'
AT2G39400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3869 x 10-2 2254 2 99.91% 2256 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 696 3 99.57% 699 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.797 x 10-3 8 0 0 6 100.00% 100.00% 8 6 TAIR8 Avg. embryo expression (dissected): '17.6918'
Avg. embryo expression (LCM): '0'
AT2G39400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 593 6 0 1586 99.00% 100.00% 599 1586 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '650.498'
Avg. expression score in LCM sample: '6.18782'
Tissue used: 'full endosperm'
AT2G39390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.66677 x 10-1 126 16 88 92 88.73% 51.11% 142 180 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.300851'
Avg. expression score for this sample: '243.032'
Avg. expression score in LCM sample: '98.4613'
Tissue used: 'full endosperm'
AT2G39390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-13 98 140 41.18% 238 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.5 x 10-5 239 117 24 11 67.13% 31.43% 356 35 TAIR8 Avg. embryo expression (dissected): '423.297'
Avg. embryo expression (LCM): '1183.75'
AT2G39390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2 x 10-5 28 39 41.79% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.47572 x 10-1 75 17 25 46 81.52% 64.79% 92 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.300851'
Avg. expression score for this sample: '130.441'
Avg. expression score in LCM sample: '98.4613'
Tissue used: 'pure endosperm, no chalazal'
AT2G39390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-12 265 27 90.75% 292 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39380 EXO70H2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.07412 x 10-1 35 9 79.55% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39380 EXO70H2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.98387 x 10-1 5 9 4 15 35.71% 78.95% 14 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.518701'
Avg. expression score for this sample: '4.48965'
Avg. expression score in LCM sample: '.7055'
Tissue used: 'pure endosperm, no chalazal'
AT2G39380 EXO70H2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39380 EXO70H2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.07708 x 10-1 22 9 3 24 70.97% 88.89% 31 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.518701'
Avg. expression score for this sample: '7.26633'
Avg. expression score in LCM sample: '.7055'
Tissue used: 'full endosperm'
AT2G39380 EXO70H2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.135 x 10-2 20 5 3 5 80.00% 62.50% 25 8 TAIR8 Avg. embryo expression (dissected): '8.83489'
Avg. embryo expression (LCM): '2.42381'
AT2G39380 EXO70H2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.1562 x 10-1 16 8 66.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39370 MAKR4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39370 MAKR4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39370 MAKR4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.255565'
Avg. embryo expression (LCM): '0'
AT2G39370 MAKR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.10777 x 10-1 7 1 0 3 87.50% 100.00% 8 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.321739'
Avg. expression score for this sample: '11.4335'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G39370 MAKR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.321739'
Avg. expression score for this sample: '1.58722'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G39370 MAKR4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.18365 x 10-1 449 9 98.03% 458 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.84 x 10-4 15 0 0 14 100.00% 100.00% 15 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.1e-30'
Avg. expression score for this sample: '38.7278'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G39360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7 x 10-27 56 1 1 201 98.25% 99.50% 57 202 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.1e-30'
Avg. expression score for this sample: '84.9403'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G39360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-6 350 32 91.62% 382 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 3 2 1 62.50% 33.33% 8 3 TAIR8 Avg. embryo expression (dissected): '18.6384'
Avg. embryo expression (LCM): '3.27779'
AT2G39360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39350 ABCG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.2871 x 10-2 29 0 100.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39350 ABCG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.1 x 10-7 28 5 9 105 84.85% 92.11% 33 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-08'
Avg. expression score for this sample: '44.1968'
Avg. expression score in LCM sample: '9.50955'
Tissue used: 'full endosperm'
AT2G39350 ABCG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.36531 x 10-1 9 12 3 11 42.86% 78.57% 21 14 TAIR8 Avg. embryo expression (dissected): '36.5377'
Avg. embryo expression (LCM): '5.08622'
AT2G39350 ABCG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.56804 x 10-1 603 61 90.81% 664 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39350 ABCG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.8686 x 10-2 13 7 4 47 65.00% 92.16% 20 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-08'
Avg. expression score for this sample: '36.5141'
Avg. expression score in LCM sample: '9.50955'
Tissue used: 'pure endosperm, no chalazal'
AT2G39350 ABCG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0 x 10-9 706 12 98.33% 718 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39340 SAC3A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.469 x 10-3 227 48 82.55% 275 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39340 SAC3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 32 18 17 41 64.00% 70.69% 50 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.077131'
Avg. expression score for this sample: '96.7318'
Avg. expression score in LCM sample: '43.7557'
Tissue used: 'pure endosperm, no chalazal'
AT2G39340 SAC3A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.82295 x 10-1 120 38 75.95% 158 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39340 SAC3A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 23 8 74.19% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39340 SAC3A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.71217 x 10-1 24 21 5 12 53.33% 70.59% 45 17 TAIR8 Avg. embryo expression (dissected): '136.713'
Avg. embryo expression (LCM): '80.6512'
AT2G39340 SAC3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8249 x 10-2 81 24 31 92 77.14% 74.80% 105 123 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.077131'
Avg. expression score for this sample: '122.449'
Avg. expression score in LCM sample: '43.7557'
Tissue used: 'full endosperm'
AT2G39330 JAL23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.10389'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G39330 JAL23 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39330 JAL23 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.922476'
Avg. embryo expression (LCM): '0'
AT2G39330 JAL23 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39330 JAL23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.320272'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G39330 JAL23 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.77127'
Avg. expression score in LCM sample: '2.16059'
Tissue used: 'pure endosperm, no chalazal'
AT2G39320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.35059'
Avg. expression score in LCM sample: '2.16059'
Tissue used: 'full endosperm'
AT2G39320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G39320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39310 JAL22 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39310 JAL22 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39310 JAL22 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.542658'
Avg. embryo expression (LCM): '.778632'
AT2G39310 JAL22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.67468'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G39310 JAL22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.958561'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G39310 JAL22 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.84945 x 10-1 13 14 48.15% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 3 5 7 76.92% 58.33% 13 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.772077'
Avg. expression score for this sample: '76.3821'
Avg. expression score in LCM sample: '51.6779'
Tissue used: 'pure endosperm, no chalazal'
AT2G39300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.25331 x 10-1 27 18 12 23 60.00% 65.71% 45 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.772077'
Avg. expression score for this sample: '98.0473'
Avg. expression score in LCM sample: '51.6779'
Tissue used: 'full endosperm'
AT2G39300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.02708 x 10-1 27 13 67.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.36461 x 10-1 3 8 3 0 27.27% 0.00% 11 3 TAIR8 Avg. embryo expression (dissected): '72.1775'
Avg. embryo expression (LCM): '68.6829'
AT2G39300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.2584 x 10-2 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39290 PGP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39290 PGP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '88.0603'
Avg. expression score in LCM sample: '86.7471'
Tissue used: 'full endosperm'
AT2G39290 PGP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '267.541'
Avg. embryo expression (LCM): '163.902'
AT2G39290 PGP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39290 PGP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '152.703'
Avg. expression score in LCM sample: '86.7471'
Tissue used: 'pure endosperm, no chalazal'
AT2G39290 PGP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.5 x 10-29 375 14 96.40% 389 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.85117 x 10-1 110 32 56 37 77.46% 39.78% 142 93 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012711'
Avg. expression score for this sample: '260.344'
Avg. expression score in LCM sample: '94.2871'
Tissue used: 'pure endosperm, no chalazal'
AT2G39280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-17 210 9 95.89% 219 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0951 x 10-2 48 33 59.26% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.579 x 10-2 82 33 28 21 71.30% 42.86% 115 49 TAIR8 Avg. embryo expression (dissected): '267.597'
Avg. embryo expression (LCM): '140.995'
AT2G39280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.61 x 10-4 319 67 110 217 82.64% 66.36% 386 327 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012711'
Avg. expression score for this sample: '270.626'
Avg. expression score in LCM sample: '94.2871'
Tissue used: 'full endosperm'
AT2G39270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '91.8927'
Avg. expression score in LCM sample: '67.2724'
Tissue used: 'full endosperm'
AT2G39270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '97.7976'
Avg. embryo expression (LCM): '101.938'
AT2G39270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '94.8384'
Avg. expression score in LCM sample: '67.2724'
Tissue used: 'pure endosperm, no chalazal'
AT2G39270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'