| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G176455 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.93 x 10-14 | 468 | 258 | 526 | 309 | 64.46% | 37.01% | 726 | 835 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.50e-15' χ2 p-value for Mo17 x B73: '5.93e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G176455 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.81 x 10-17 | 729 | 165 | 340 | 363 | 81.54% | 51.64% | 894 | 703 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.88e-21' χ2 p-value for Mo17 x B73: '2.81e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G176443 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.27 x 10-7 | 1171 | 443 | 812 | 775 | 72.55% | 48.83% | 1614 | 1587 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.27e-07' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G176443 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.54452 x 10-2 | 584 | 417 | 437 | 386 | 58.34% | 46.90% | 1001 | 823 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.30e-07' χ2 p-value for Mo17 x B73: '.0754452' Biased in favor of strain: '' |
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| GRMZM2G176437 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 5 | 2 | 33.33% | 28.57% | 6 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: '' |
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| GRMZM2G176437 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 6 | 0 | 50.00% | 0.00% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G176430 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 12 | 0.00% | 100.00% | 2 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G176430 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G176397 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1190 | 345 | 993 | 337 | 77.52% | 25.34% | 1535 | 1330 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G176397 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.16 x 10-26 | 419 | 48 | 360 | 52 | 89.72% | 12.62% | 467 | 412 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.16e-26' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G176396 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.68 x 10-8 | 378 | 287 | 182 | 668 | 56.84% | 78.59% | 665 | 850 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.68e-08' χ2 p-value for Mo17 x B73: '1.67e-13' Biased in favor of strain: 'Mo17' |
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| GRMZM2G176396 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1 x 10-9 | 492 | 219 | 360 | 214 | 69.20% | 37.28% | 711 | 574 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.34e-24' χ2 p-value for Mo17 x B73: '1.10e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G176394 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.637029 x 10-1 | 15 | 1 | 5 | 7 | 93.75% | 58.33% | 16 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004653' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G176394 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.36382 x 10-2 | 11 | 0 | 6 | 4 | 100.00% | 40.00% | 11 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.0736382' Biased in favor of strain: '' |
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| GRMZM2G176390 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G176390 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 419 | 40 | 363 | 35 | 91.29% | 8.79% | 459 | 398 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G176382 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.693273 x 10-1 | 146 | 99 | 85 | 68 | 59.59% | 44.44% | 245 | 153 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026758' χ2 p-value for Mo17 x B73: '.1693273' Biased in favor of strain: '' |
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| GRMZM2G176382 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.893193 x 10-1 | 292 | 127 | 180 | 196 | 69.69% | 52.13% | 419 | 376 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1893193' χ2 p-value for Mo17 x B73: '2.23e-09' Biased in favor of strain: '' |
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| GRMZM2G176375 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.05 x 10-18 | 73 | 195 | 26 | 265 | 27.24% | 91.07% | 268 | 291 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.05e-18' Biased in favor of strain: 'Mo17' |
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| GRMZM2G176375 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.40775 x 10-2 | 15 | 27 | 5 | 30 | 35.71% | 85.71% | 42 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0640775' χ2 p-value for Mo17 x B73: '.0000238' Biased in favor of strain: '' |
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| GRMZM2G176358 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 587 | 200 | 577 | 177 | 74.59% | 23.47% | 787 | 754 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G176358 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.866 x 10-4 | 57 | 5 | 24 | 15 | 91.94% | 38.46% | 62 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000244' χ2 p-value for Mo17 x B73: '.0001866' Biased in favor of strain: 'B73' |
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| GRMZM2G176340 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.074827 x 10-1 | 479 | 216 | 374 | 453 | 68.92% | 54.78% | 695 | 827 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2074827' χ2 p-value for Mo17 x B73: '4.06e-13' Biased in favor of strain: '' |
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| GRMZM2G176340 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1025 | 537 | 970 | 522 | 65.62% | 34.99% | 1562 | 1492 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.02e-35' χ2 p-value for Mo17 x B73: '4.20e-31' Biased in favor of strain: 'B73' |
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| GRMZM2G176307 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.48 x 10-18 | 7958 | 6250 | 7012 | 8085 | 56.01% | 53.55% | 14208 | 15097 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.48e-18' Biased in favor of strain: '' |
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| GRMZM2G176307 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.13 x 10-13 | 17477 | 7902 | 20071 | 37024 | 68.86% | 64.85% | 25379 | 57095 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.13e-13' χ2 p-value for Mo17 x B73: '2.78e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G176304 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 0 | 10 | 50.00% | 100.00% | 8 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G176304 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.962534 x 10-1 | 8 | 7 | 7 | 9 | 53.33% | 56.25% | 15 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7962534' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: '' |
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| GRMZM2G176289 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 3 | 3 | 1 | 75.00% | 25.00% | 12 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G176289 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G176282 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.321561 x 10-1 | 120 | 58 | 74 | 126 | 67.42% | 63.00% | 178 | 200 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8321561' χ2 p-value for Mo17 x B73: '.2713318' Biased in favor of strain: '' |
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| GRMZM2G176282 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.965214 x 10-1 | 205 | 157 | 164 | 149 | 56.63% | 47.60% | 362 | 313 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0116417' χ2 p-value for Mo17 x B73: '.3965214' Biased in favor of strain: '' |
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| GRMZM2G176270 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.665018 x 10-1 | 283 | 284 | 232 | 203 | 49.91% | 46.67% | 567 | 435 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9665018' χ2 p-value for Mo17 x B73: '.1643942' Biased in favor of strain: '' |
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| GRMZM2G176270 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.913014 x 10-1 | 17 | 5 | 19 | 11 | 77.27% | 36.67% | 22 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2913014' χ2 p-value for Mo17 x B73: '.0004909' Biased in favor of strain: '' |
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| GRMZM2G176253 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.09 x 10-8 | 144 | 5 | 23 | 4 | 96.64% | 14.81% | 149 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.34e-15' χ2 p-value for Mo17 x B73: '1.09e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G176253 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.936464 x 10-1 | 24 | 5 | 18 | 11 | 82.76% | 37.93% | 29 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004184' χ2 p-value for Mo17 x B73: '.1936464' Biased in favor of strain: '' |
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| GRMZM2G176235 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.55 x 10-15 | 266 | 110 | 306 | 138 | 70.74% | 31.08% | 376 | 444 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.62e-16' χ2 p-value for Mo17 x B73: '1.55e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G176235 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.76 x 10-7 | 73 | 83 | 55 | 236 | 46.79% | 81.10% | 156 | 291 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.40e-07' χ2 p-value for Mo17 x B73: '1.76e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G176217 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 3 | 100.00% | 100.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G176217 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1476 x 10-3 | 81 | 17 | 68 | 35 | 82.65% | 33.98% | 98 | 103 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.01e-10' χ2 p-value for Mo17 x B73: '.0011476' Biased in favor of strain: 'B73' |
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| GRMZM2G176209 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2252 | 64 | 3140 | 134 | 97.24% | 4.09% | 2316 | 3274 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G176209 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.60197 x 10-2 | 70 | 6 | 5 | 24 | 92.11% | 82.76% | 76 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.55e-06' χ2 p-value for Mo17 x B73: '.0660197' Biased in favor of strain: '' |
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| GRMZM2G176175 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.926783 x 10-1 | 98 | 55 | 165 | 34 | 64.05% | 17.09% | 153 | 199 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4926783' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G176175 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.17 x 10-8 | 248 | 125 | 217 | 115 | 66.49% | 34.64% | 373 | 332 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.91e-10' χ2 p-value for Mo17 x B73: '2.17e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G176133 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.106551 x 10-1 | 1851 | 1476 | 1586 | 1540 | 55.64% | 49.26% | 3327 | 3126 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.96e-11' χ2 p-value for Mo17 x B73: '.4106551' Biased in favor of strain: '' |
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| GRMZM2G176133 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.299603 x 10-1 | 1260 | 739 | 713 | 1412 | 63.03% | 66.45% | 1999 | 2125 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005648' χ2 p-value for Mo17 x B73: '.8299603' Biased in favor of strain: '' |
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| GRMZM2G176131 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 5 | 0.00% | 100.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: '' |
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| GRMZM2G176131 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5654 x 10-3 | 0 | 11 | 0 | 10 | 0.00% | 100.00% | 11 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: 'Mo17' |
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| GRMZM2G176117 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 2 | 0 | 2 | 77.78% | 100.00% | 9 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0955807' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G176117 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.501147 x 10-1 | 25 | 10 | 28 | 0 | 71.43% | 0.00% | 35 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5501147' χ2 p-value for Mo17 x B73: '7.25e-14' Biased in favor of strain: '' |
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| GRMZM2G176085 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G176085 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 8 | 0 | 100.00% | 0.00% | 2 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G176042 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.93 x 10-17 | 0 | 73 | 0 | 70 | 0.00% | 100.00% | 73 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.30e-17' χ2 p-value for Mo17 x B73: '5.93e-17' Biased in favor of strain: 'Mo17' |
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| GRMZM2G176042 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.7795 x 10-3 | 0 | 28 | 6 | 41 | 0.00% | 87.23% | 28 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.24e-14' χ2 p-value for Mo17 x B73: '.0027795' Biased in favor of strain: 'Mo17' |
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| GRMZM2G176029 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.054726 x 10-1 | 345 | 196 | 130 | 297 | 63.77% | 69.56% | 541 | 427 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1530166' χ2 p-value for Mo17 x B73: '.2054726' Biased in favor of strain: '' |
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| GRMZM2G176029 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.23 x 10-5 | 418 | 240 | 359 | 254 | 63.53% | 41.44% | 658 | 613 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.94e-12' χ2 p-value for Mo17 x B73: '.0000223' Biased in favor of strain: 'B73' |
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| GRMZM2G176028 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.3 x 10-9 | 702 | 386 | 572 | 393 | 64.52% | 40.73% | 1088 | 965 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.69e-22' χ2 p-value for Mo17 x B73: '8.30e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G176028 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.54 x 10-12 | 1277 | 436 | 675 | 607 | 74.55% | 47.35% | 1713 | 1282 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.54e-12' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G175995 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.54924 x 10-2 | 65 | 17 | 51 | 39 | 79.27% | 43.33% | 82 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0154924' χ2 p-value for Mo17 x B73: '2.66e-06' Biased in favor of strain: '' |
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| GRMZM2G175995 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.61569 x 10-2 | 101 | 10 | 37 | 19 | 90.99% | 33.93% | 111 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.75e-18' χ2 p-value for Mo17 x B73: '.0161569' Biased in favor of strain: 'B73' |
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| GRMZM2G175989 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 1 | 100.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G175989 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.285564 x 10-1 | 63 | 33 | 10 | 34 | 65.62% | 77.27% | 96 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8285564' χ2 p-value for Mo17 x B73: '.1355931' Biased in favor of strain: '' |
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| GRMZM2G175976 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.09 x 10-5 | 281 | 85 | 871 | 965 | 76.78% | 52.56% | 366 | 1836 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000409' χ2 p-value for Mo17 x B73: '1.23e-37' Biased in favor of strain: 'B73' |
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| GRMZM2G175976 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.955647 x 10-1 | 855 | 187 | 1243 | 1201 | 82.05% | 49.14% | 1042 | 2444 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.3955647' Biased in favor of strain: '' |
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| GRMZM2G175955 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G175955 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G175930 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 2 | 100.00% | 66.67% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G175930 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 2 | 0.00% | 100.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G175912 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 273 | 18 | 798 | 217 | 93.81% | 21.38% | 291 | 1015 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G175912 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.03 x 10-24 | 266 | 12 | 1172 | 365 | 95.68% | 23.75% | 278 | 1537 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.03e-24' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G175910 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 5 | 100.00% | 100.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: '' |
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| GRMZM2G175910 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 5 | 9 | 7 | 7 | 35.71% | 50.00% | 14 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G175875 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.2635 x 10-3 | 27 | 2 | 24 | 7 | 93.10% | 22.58% | 29 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.44e-06' χ2 p-value for Mo17 x B73: '.0022635' Biased in favor of strain: 'B73' |
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| GRMZM2G175875 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 4 | 5 | 55.56% | 0 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G175870 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.87 x 10-5 | 49 | 3 | 16 | 6 | 94.23% | 27.27% | 52 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000248' χ2 p-value for Mo17 x B73: '.0000887' Biased in favor of strain: 'B73' |
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| GRMZM2G175870 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.57 x 10-9 | 168 | 78 | 212 | 87 | 68.29% | 29.10% | 246 | 299 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.57e-09' χ2 p-value for Mo17 x B73: '4.87e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G175856 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 16 | 13 | 0 | 4 | 55.17% | 100.00% | 29 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5774686' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G175856 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 3 | 2 | 100.00% | 40.00% | 10 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM2G175818 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3623 x 10-3 | 23 | 34 | 4 | 37 | 40.35% | 90.24% | 57 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000025' χ2 p-value for Mo17 x B73: '.0013623' Biased in favor of strain: 'Mo17' |
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| GRMZM2G175818 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.2553 x 10-3 | 115 | 158 | 78 | 129 | 42.12% | 62.32% | 273 | 207 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0092553' χ2 p-value for Mo17 x B73: '.000393' Biased in favor of strain: 'Mo17' |
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| GRMZM2G175816 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 10 | 10 | 5 | 5 | 50.00% | 50.00% | 20 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G175816 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.864761 x 10-1 | 26 | 4 | 10 | 14 | 86.67% | 58.33% | 30 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0201377' χ2 p-value for Mo17 x B73: '.3864761' Biased in favor of strain: '' |
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| GRMZM2G175799 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.13 x 10-13 | 114 | 2 | 88 | 1 | 98.28% | 1.12% | 116 | 89 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.13e-13' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G175799 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.77 x 10-20 | 92 | 3 | 140 | 1 | 96.84% | 0.71% | 95 | 141 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.77e-20' χ2 p-value for Mo17 x B73: '1.19e-31' Biased in favor of strain: 'B73' |
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| GRMZM2G175779 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.8924 x 10-3 | 1 | 11 | 0 | 13 | 8.33% | 100.00% | 12 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0038924' χ2 p-value for Mo17 x B73: '.0003115' Biased in favor of strain: 'Mo17' |
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| GRMZM2G175779 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.90165 x 10-2 | 1 | 15 | 0 | 11 | 6.25% | 100.00% | 16 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.95e-07' χ2 p-value for Mo17 x B73: '.0190165' Biased in favor of strain: '' |
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| GRMZM2G175761 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G175761 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G175728 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.9192 x 10-3 | 149 | 79 | 93 | 61 | 65.35% | 39.61% | 228 | 154 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.55e-06' χ2 p-value for Mo17 x B73: '.0099192' Biased in favor of strain: 'B73' |
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| GRMZM2G175728 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.55 x 10-11 | 365 | 65 | 171 | 172 | 84.88% | 50.15% | 430 | 343 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.12e-15' χ2 p-value for Mo17 x B73: '8.55e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G175676 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999994 x 10-1 | 139 | 88 | 61 | 122 | 61.23% | 66.67% | 227 | 183 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0824625' χ2 p-value for Mo17 x B73: '.9999994' Biased in favor of strain: '' |
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| GRMZM2G175676 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.637029 x 10-1 | 92 | 63 | 57 | 51 | 59.35% | 47.22% | 155 | 108 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0198413' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G175642 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.0106 x 10-3 | 1236 | 864 | 812 | 705 | 58.86% | 46.47% | 2100 | 1517 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.75e-16' χ2 p-value for Mo17 x B73: '.0060106' Biased in favor of strain: 'B73' |
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| GRMZM2G175642 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.927835 x 10-1 | 661 | 301 | 540 | 1141 | 68.71% | 67.88% | 962 | 1681 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.178644' χ2 p-value for Mo17 x B73: '.2927835' Biased in favor of strain: '' |
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| GRMZM2G175593 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 8 | 1 | 11 | 0.00% | 91.67% | 8 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0661926' Biased in favor of strain: '' |
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| GRMZM2G175593 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 6 | 0.00% | 100.00% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G175576 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.43 x 10-8 | 4 | 39 | 2 | 128 | 9.30% | 98.46% | 43 | 130 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.43e-08' χ2 p-value for Mo17 x B73: '2.17e-28' Biased in favor of strain: 'Mo17' |
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| GRMZM2G175576 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 0 | 332 | 4 | 892 | 0.00% | 99.55% | 332 | 896 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G175574 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.3855 x 10-3 | 234 | 79 | 133 | 126 | 74.76% | 48.65% | 313 | 259 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0023855' χ2 p-value for Mo17 x B73: '7.69e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G175574 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.0 x 10-30 | 444 | 163 | 419 | 125 | 73.15% | 22.98% | 607 | 544 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.93e-30' χ2 p-value for Mo17 x B73: '1.98e-36' Biased in favor of strain: 'B73' |