| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G40670 | RR16 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G40670 | RR16 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40670 | RR16 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '39.1161' Avg. expression score in LCM sample: '25.4715' Tissue used: 'full endosperm' |
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| AT2G40670 | RR16 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '5.88317' Avg. embryo expression (LCM): '0' |
|||||
| AT2G40660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.265 x 10-3 | 236 | 129 | 45 | 30 | 64.66% | 40.00% | 365 | 75 | TAIR8 |
Avg. embryo expression (dissected): '217.822' Avg. embryo expression (LCM): '252.063' |
||||
| AT2G40660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 39 | 15 | 72.22% | 54 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.328 x 10-3 | 254 | 136 | 65.13% | 390 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.719 x 10-3 | 228 | 68 | 99 | 235 | 77.03% | 70.36% | 296 | 334 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.006712' Avg. expression score for this sample: '181.279' Avg. expression score in LCM sample: '37.6561' Tissue used: 'full endosperm' |
|||||
| AT2G40660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.4 x 10-26 | 513 | 35 | 93.61% | 548 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.40008 x 10-1 | 133 | 38 | 53 | 84 | 77.78% | 61.31% | 171 | 137 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.006712' Avg. expression score for this sample: '134.051' Avg. expression score in LCM sample: '37.6561' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G40650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2682.22' Avg. expression score in LCM sample: '163.088' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G40650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G40650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1315.45' Avg. expression score in LCM sample: '163.088' Tissue used: 'full endosperm' |
|||||||
| AT2G40650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G40650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2244.6' Avg. embryo expression (LCM): '1005.87' |
||||||
| AT2G40650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G40640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.35 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G40640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.40405 x 10-1 | 5 | 0 | 2 | 5 | 100.00% | 71.43% | 5 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '38.3047' Avg. expression score in LCM sample: '31.9533' Tissue used: 'full endosperm' |
|||||
| AT2G40640 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 4 | 0 | 2 | 20.00% | 100.00% | 5 | 2 | TAIR8 |
Avg. embryo expression (dissected): '63.053' Avg. embryo expression (LCM): '29.1861' |
||||
| AT2G40640 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.92075 x 10-1 | 2 | 2 | 2 | 1 | 50.00% | 33.33% | 4 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '38.4356' Avg. expression score in LCM sample: '31.9533' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G40630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.23227 x 10-1 | 48 | 32 | 26 | 76 | 60.00% | 74.51% | 80 | 102 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.576989' Avg. expression score for this sample: '47.9661' Avg. expression score in LCM sample: '36.4361' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G40630 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.88702 x 10-1 | 48 | 23 | 67.61% | 71 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40630 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 48 | 53 | 9 | 14 | 47.52% | 60.87% | 101 | 23 | TAIR8 |
Avg. embryo expression (dissected): '46.5779' Avg. embryo expression (LCM): '57.468' |
||||
| AT2G40630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.7893 x 10-2 | 18 | 1 | 94.74% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.2798 x 10-2 | 39 | 9 | 81.25% | 48 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.70654 x 10-1 | 44 | 39 | 15 | 81 | 53.01% | 84.38% | 83 | 96 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.576989' Avg. expression score for this sample: '44.2629' Avg. expression score in LCM sample: '36.4361' Tissue used: 'full endosperm' |
|||||
| AT2G40620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.7874 x 10-2 | 17 | 0 | 22 | 0 | 100.00% | 0.00% | 17 | 22 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.008772' Avg. expression score for this sample: '122.025' Avg. expression score in LCM sample: '34.0257' Tissue used: 'full endosperm' |
|||||
| AT2G40620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.57057 x 10-1 | 13 | 0 | 4 | 0 | 100.00% | 0.00% | 13 | 4 | TAIR8 |
Avg. embryo expression (dissected): '158.25' Avg. embryo expression (LCM): '94.8926' |
||||
| AT2G40620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.6 x 10-12 | 0 | 89 | 0.00% | 89 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-18 | 94 | 0 | 100.00% | 94 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0314 x 10-1 | 7 | 0 | 12 | 0 | 100.00% | 0.00% | 7 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.008772' Avg. expression score for this sample: '141.927' Avg. expression score in LCM sample: '34.0257' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G40610 | EXPA8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G40610 | EXPA8 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40610 | EXPA8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40610 | EXPA8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40610 | EXPA8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.151659' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G40610 | EXPA8 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
|||||
| AT2G40600 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.14743 x 10-1 | 27 | 46 | 6 | 3 | 36.99% | 33.33% | 73 | 9 | TAIR8 |
Avg. embryo expression (dissected): '139.788' Avg. embryo expression (LCM): '94.227' |
||||
| AT2G40600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0033 x 10-2 | 41 | 3 | 93.18% | 44 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.8 x 10-6 | 50 | 0 | 100.00% | 50 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.124 x 10-3 | 56 | 22 | 17 | 109 | 71.79% | 86.51% | 78 | 126 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.012662' Avg. expression score for this sample: '137.15' Avg. expression score in LCM sample: '91.3769' Tissue used: 'full endosperm' |
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| AT2G40600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 33 | 19 | 16 | 38 | 63.46% | 70.37% | 52 | 54 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.012662' Avg. expression score for this sample: '153.033' Avg. expression score in LCM sample: '91.3769' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G40600 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.9 x 10-5 | 68 | 3 | 95.77% | 71 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40590 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.4127 x 10-2 | 15 | 2 | 88.24% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.36046 x 10-1 | 10 | 13 | 6 | 22 | 43.48% | 78.57% | 23 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.871578' Avg. expression score for this sample: '94.9842' Avg. expression score in LCM sample: '39.3463' Tissue used: 'full endosperm' |
|||||
| AT2G40590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.26296 x 10-1 | 10 | 2 | 83.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40590 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.61998 x 10-1 | 9 | 22 | 2 | 9 | 29.03% | 81.82% | 31 | 11 | TAIR8 |
Avg. embryo expression (dissected): '395.049' Avg. embryo expression (LCM): '304.571' |
||||
| AT2G40590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.41647 x 10-1 | 6 | 4 | 60.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 10 | 10 | 1 | 13 | 50.00% | 92.86% | 20 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.871578' Avg. expression score for this sample: '226.069' Avg. expression score in LCM sample: '39.3463' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G40580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 7 | 4 | 3 | 8 | 63.64% | 72.73% | 11 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.81113' Avg. expression score in LCM sample: '6.45238' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G40580 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.65 x 10-4 | 45 | 87 | 34.09% | 132 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.3847 x 10-1 | 804 | 351 | 69.61% | 1155 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.21212 x 10-1 | 0 | 2 | 0.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 8 | 7 | 0 | 6 | 53.33% | 100.00% | 15 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7.43086' Avg. expression score in LCM sample: '6.45238' Tissue used: 'full endosperm' |
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| AT2G40580 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.44098 x 10-1 | 15 | 22 | 12 | 5 | 40.54% | 29.41% | 37 | 17 | TAIR8 |
Avg. embryo expression (dissected): '26.8359' Avg. embryo expression (LCM): '4.40806' |
||||
| AT2G40570 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.1629 x 10-2 | 1 | 15 | 2 | 3 | 6.25% | 60.00% | 16 | 5 | TAIR8 |
Avg. embryo expression (dissected): '37.6206' Avg. embryo expression (LCM): '45.349' |
||||
| AT2G40570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.07598 x 10-1 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.32815 x 10-1 | 53 | 18 | 74.65% | 71 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.50555 x 10-1 | 13 | 20 | 6 | 56 | 39.39% | 90.32% | 33 | 62 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.557268' Avg. expression score for this sample: '76.3776' Avg. expression score in LCM sample: '19.901' Tissue used: 'full endosperm' |
|||||
| AT2G40570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 6 | 3 | 2 | 3 | 66.67% | 60.00% | 9 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.557268' Avg. expression score for this sample: '26.0769' Avg. expression score in LCM sample: '19.901' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G40570 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.43779 x 10-1 | 26 | 5 | 83.87% | 31 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40560 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G40560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.198603' Avg. expression score in LCM sample: '32.2619' Tissue used: 'full endosperm' |
|||||||
| AT2G40560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G40560 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.637366' Avg. embryo expression (LCM): '0' |
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| AT2G40560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G40560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.844394' Avg. expression score in LCM sample: '32.2619' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G40550 | ETG1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.49609 x 10-1 | 32 | 14 | 34 | 41 | 69.57% | 54.67% | 46 | 75 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.540316' Avg. expression score for this sample: '48.5929' Avg. expression score in LCM sample: '40.7867' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G40550 | ETG1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.5 x 10-11 | 171 | 21 | 89.06% | 192 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G40550 | ETG1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.25021 x 10-1 | 77 | 40 | 65.81% | 117 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G40550 | ETG1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.52061 x 10-1 | 17 | 15 | 53.12% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G40550 | ETG1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.2547 x 10-1 | 62 | 21 | 66 | 107 | 74.70% | 61.85% | 83 | 173 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.540316' Avg. expression score for this sample: '66.6403' Avg. expression score in LCM sample: '40.7867' Tissue used: 'full endosperm' |
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| AT2G40550 | ETG1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.29594 x 10-1 | 111 | 79 | 41 | 29 | 58.42% | 41.43% | 190 | 70 | TAIR8 |
Avg. embryo expression (dissected): '156.314' Avg. embryo expression (LCM): '240.836' |
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| AT2G40540 | KT2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.94199 x 10-1 | 41 | 41 | 14 | 17 | 50.00% | 54.84% | 82 | 31 | TAIR8 |
Avg. embryo expression (dissected): '149.718' Avg. embryo expression (LCM): '67.9042' |
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| AT2G40540 | KT2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.51732 x 10-1 | 55 | 26 | 67.90% | 81 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G40540 | KT2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.41528 x 10-1 | 56 | 28 | 66.67% | 84 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G40540 | KT2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.53086 x 10-1 | 247 | 124 | 198 | 325 | 66.58% | 62.14% | 371 | 523 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.134334' Avg. expression score for this sample: '297.996' Avg. expression score in LCM sample: '216.353' Tissue used: 'full endosperm' |
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| AT2G40540 | KT2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.65378 x 10-1 | 147 | 75 | 116 | 189 | 66.22% | 61.97% | 222 | 305 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.134334' Avg. expression score for this sample: '522.608' Avg. expression score in LCM sample: '216.353' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G40540 | KT2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.17201 x 10-1 | 29 | 11 | 72.50% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G40530 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G40530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.710178' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G40530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G40530 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G40530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G40530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.737973' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G40520 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.0495 x 10-2 | 0 | 2 | 7 | 2 | 0.00% | 22.22% | 2 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001397' Avg. expression score for this sample: '58.1574' Avg. expression score in LCM sample: '37.7442' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G40520 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4289 x 10-2 | 11 | 6 | 64.71% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40520 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.663 x 10-3 | 32 | 25 | 56.14% | 57 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40520 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G40520 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.7682 x 10-2 | 1 | 1 | 15 | 6 | 50.00% | 28.57% | 2 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001397' Avg. expression score for this sample: '43.5509' Avg. expression score in LCM sample: '37.7442' Tissue used: 'full endosperm' |
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| AT2G40520 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.80172 x 10-1 | 4 | 7 | 1 | 0 | 36.36% | 0.00% | 11 | 1 | TAIR8 |
Avg. embryo expression (dissected): '88.8511' Avg. embryo expression (LCM): '43.4401' |
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| AT2G40510 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.68097 x 10-1 | 26 | 30 | 5 | 0 | 46.43% | 0.00% | 56 | 5 | TAIR8 |
Avg. embryo expression (dissected): '381.974' Avg. embryo expression (LCM): '435.707' |
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| AT2G40510 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.3397 x 10-2 | 15 | 3 | 83.33% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40510 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 18 | 12 | 60.00% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G40510 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.48752 x 10-1 | 26 | 16 | 20 | 26 | 61.90% | 56.52% | 42 | 46 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.445746' Avg. expression score for this sample: '104.921' Avg. expression score in LCM sample: '61.9958' Tissue used: 'full endosperm' |
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| AT2G40510 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 12 | 8 | 8 | 18 | 60.00% | 69.23% | 20 | 26 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.445746' Avg. expression score for this sample: '199.763' Avg. expression score in LCM sample: '61.9958' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G40510 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.802 x 10-3 | 40 | 8 | 83.33% | 48 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |