GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G177894	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.22058 x 10^-2	22	4	30	25	84.62%	45.45%	26	55	RefGen V2	χ2 p-value for B73 x Mo17: '.0522058' χ2 p-value for Mo17 x B73: '.0008465' Biased in favor of strain: ''
GRMZM2G177894	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.397453 x 10^-1	85	73	92	52	53.80%	36.11%	158	144	RefGen V2	χ2 p-value for B73 x Mo17: '.3397453' χ2 p-value for Mo17 x B73: '.0008581' Biased in favor of strain: ''
GRMZM2G177885	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.110798 x 10^-1	30	42	21	16	41.67%	43.24%	72	37	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.4110798' Biased in favor of strain: ''
GRMZM2G177885	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.51452 x 10^-1	27	8	19	27	77.14%	58.70%	35	46	RefGen V2	χ2 p-value for B73 x Mo17: '.1886014' χ2 p-value for Mo17 x B73: '.251452' Biased in favor of strain: ''
GRMZM2G177883	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	2	17	0.00%	89.47%	3	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.0349551' Biased in favor of strain: ''
GRMZM2G177883	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.37094 x 10^-1	37	13	23	19	74.00%	45.24%	50	42	RefGen V2	χ2 p-value for B73 x Mo17: '.0006885' χ2 p-value for Mo17 x B73: '.537094' Biased in favor of strain: ''
GRMZM2G177878	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.630246 x 10^-1	20	14	21	23	58.82%	52.27%	34	44	RefGen V2	χ2 p-value for B73 x Mo17: '.3034837' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: ''
GRMZM2G177878	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.795104 x 10^-1	12	4	57	42	75.00%	42.42%	16	99	RefGen V2	χ2 p-value for B73 x Mo17: '.4795104' χ2 p-value for Mo17 x B73: '3.11e-07' Biased in favor of strain: ''
GRMZM2G177867	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.321 x 10^-4	80	16	97	60	83.33%	38.22%	96	157	RefGen V2	χ2 p-value for B73 x Mo17: '.0005321' χ2 p-value for Mo17 x B73: '3.97e-14' Biased in favor of strain: 'B73'
GRMZM2G177867	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1441	735	1145	612	66.22%	34.83%	2176	1757	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '4.84e-37' Biased in favor of strain: 'B73'
GRMZM2G177863	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.93464 x 10^-2	44	28	30	14	61.11%	31.82%	72	44	RefGen V2	χ2 p-value for B73 x Mo17: '.0593464' χ2 p-value for Mo17 x B73: '.0158613' Biased in favor of strain: ''
GRMZM2G177863	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5336 x 10^-3	38	5	14	2	88.37%	12.50%	43	16	RefGen V2	χ2 p-value for B73 x Mo17: '.0025336' χ2 p-value for Mo17 x B73: '4.30e-06' Biased in favor of strain: 'B73'
GRMZM2G177845	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.142005 x 10^-1	16	11	10	28	59.26%	73.68%	27	38	RefGen V2	χ2 p-value for B73 x Mo17: '.4142005' χ2 p-value for Mo17 x B73: '.3587955' Biased in favor of strain: ''
GRMZM2G177845	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.53523 x 10^-2	98	76	76	103	56.32%	57.54%	174	179	RefGen V2	χ2 p-value for B73 x Mo17: '.0953523' χ2 p-value for Mo17 x B73: '.0435835' Biased in favor of strain: ''
GRMZM2G177842	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	0	2	50.00%	100.00%	6	2	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G177842	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	4	3	100.00%	42.86%	4	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: ''
GRMZM2G177792	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	0	3	3	100.00%	50.00%	11	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: ''
GRMZM2G177792	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G177771	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.7 x 10^-6	692	462	578	431	59.97%	42.72%	1154	1009	RefGen V2	χ2 p-value for B73 x Mo17: '1.28e-11' χ2 p-value for Mo17 x B73: '3.70e-06' Biased in favor of strain: 'B73'
GRMZM2G177771	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.138621 x 10^-1	492	277	430	728	63.98%	62.87%	769	1158	RefGen V2	χ2 p-value for B73 x Mo17: '.1138621' χ2 p-value for Mo17 x B73: '.0060905' Biased in favor of strain: ''
GRMZM2G177715	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.94873 x 10^-1	8	5	13	37	61.54%	74.00%	13	50	RefGen V2	χ2 p-value for B73 x Mo17: '.694873' χ2 p-value for Mo17 x B73: '.2713323' Biased in favor of strain: ''
GRMZM2G177715	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.58128 x 10^-2	15	26	11	23	36.59%	67.65%	41	34	RefGen V2	χ2 p-value for B73 x Mo17: '.0858128' χ2 p-value for Mo17 x B73: '.0395918' Biased in favor of strain: ''
GRMZM2G177693	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.068637 x 10^-1	39	26	65	39	60.00%	37.50%	65	104	RefGen V2	χ2 p-value for B73 x Mo17: '.1068637' χ2 p-value for Mo17 x B73: '.0107874' Biased in favor of strain: ''
GRMZM2G177693	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G177654	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.630244 x 10^-1	20	4	8	14	83.33%	63.64%	24	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0832676' χ2 p-value for Mo17 x B73: '.7630244' Biased in favor of strain: ''
GRMZM2G177654	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.735682 x 10^-1	32	22	21	5	59.26%	19.23%	54	26	RefGen V2	χ2 p-value for B73 x Mo17: '.1735682' χ2 p-value for Mo17 x B73: '.0017019' Biased in favor of strain: ''
GRMZM2G177631	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15 x 10^-18	1438	803	965	617	64.17%	39.00%	2241	1582	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.15e-18' Biased in favor of strain: 'B73'
GRMZM2G177631	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.6 x 10^-17	974	277	1018	1063	77.86%	51.08%	1251	2081	RefGen V2	χ2 p-value for B73 x Mo17: '4.60e-17' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G177620	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		50	1	0	1	98.04%	100.00%	51	1	RefGen V2	χ2 p-value for B73 x Mo17: '2.01e-06' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G177620	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	2	0	100.00%	0.00%	9	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G177570	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.68533 x 10^-2	212	173	179	140	55.06%	43.89%	385	319	RefGen V2	χ2 p-value for B73 x Mo17: '.0468533' χ2 p-value for Mo17 x B73: '.0289931' Biased in favor of strain: 'B73'
GRMZM2G177570	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.012605 x 10^-1	97	38	45	30	71.85%	40.00%	135	75	RefGen V2	χ2 p-value for B73 x Mo17: '.2012605' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: ''
GRMZM2G177561	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.336183 x 10^-1	15	3	24	1	83.33%	4.00%	18	25	RefGen V2	χ2 p-value for B73 x Mo17: '.1336183' χ2 p-value for Mo17 x B73: '3.00e-11' Biased in favor of strain: ''
GRMZM2G177561	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.607 x 10^-4	37	2	25	5	94.87%	16.67%	39	30	RefGen V2	χ2 p-value for B73 x Mo17: '2.09e-08' χ2 p-value for Mo17 x B73: '.0002607' Biased in favor of strain: 'B73'
GRMZM2G177532	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.09 x 10^-20	433	185	384	169	70.06%	30.56%	618	553	RefGen V2	χ2 p-value for B73 x Mo17: '1.94e-23' χ2 p-value for Mo17 x B73: '6.09e-20' Biased in favor of strain: 'B73'
GRMZM2G177532	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.2 x 10^-13	638	174	366	336	78.57%	47.86%	812	702	RefGen V2	χ2 p-value for B73 x Mo17: '6.20e-13' χ2 p-value for Mo17 x B73: '4.17e-26' Biased in favor of strain: 'B73'
GRMZM2G177518	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.166644 x 10^-1	10	0	7	6	100.00%	46.15%	10	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.1166644' Biased in favor of strain: ''
GRMZM2G177518	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.67 x 10^-7	216	100	267	159	68.35%	37.32%	316	426	RefGen V2	χ2 p-value for B73 x Mo17: '6.78e-11' χ2 p-value for Mo17 x B73: '1.67e-07' Biased in favor of strain: 'B73'
GRMZM2G177458	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.962534 x 10^-1	7	5	8	7	58.33%	46.67%	12	15	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.7962534' Biased in favor of strain: ''
GRMZM2G177458	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.003433 x 10^-1	7	8	1	15	46.67%	93.75%	15	16	RefGen V2	χ2 p-value for B73 x Mo17: '.1003433' χ2 p-value for Mo17 x B73: '.0215563' Biased in favor of strain: ''
GRMZM2G177447	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.83 x 10^-6	228	58	140	159	79.72%	53.18%	286	299	RefGen V2	χ2 p-value for B73 x Mo17: '2.83e-06' χ2 p-value for Mo17 x B73: '7.50e-07' Biased in favor of strain: 'B73'
GRMZM2G177447	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.82559 x 10^-2	183	130	156	117	58.47%	42.86%	313	273	RefGen V2	χ2 p-value for B73 x Mo17: '.0027378' χ2 p-value for Mo17 x B73: '.0182559' Biased in favor of strain: 'B73'
GRMZM2G177445	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.37 x 10^-5	81	32	78	36	71.68%	31.58%	113	114	RefGen V2	χ2 p-value for B73 x Mo17: '4.04e-06' χ2 p-value for Mo17 x B73: '.0000837' Biased in favor of strain: 'B73'
GRMZM2G177445	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.110912 x 10^-1	24	11	17	17	68.57%	50.00%	35	34	RefGen V2	χ2 p-value for B73 x Mo17: '.8110912' χ2 p-value for Mo17 x B73: '.0392503' Biased in favor of strain: ''
GRMZM2G177432	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.0853 x 10^-3	1097	636	548	1261	63.30%	69.71%	1733	1809	RefGen V2	χ2 p-value for B73 x Mo17: '.0029517' χ2 p-value for Mo17 x B73: '.0060853' Biased in favor of strain: 'Mo17'
GRMZM2G177432	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.79 x 10^-8	1750	1363	1330	1067	56.22%	44.51%	3113	2397	RefGen V2	χ2 p-value for B73 x Mo17: '4.03e-12' χ2 p-value for Mo17 x B73: '7.79e-08' Biased in favor of strain: 'B73'
GRMZM2G177412	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	24	4	15	15	85.71%	50.00%	28	30	RefGen V2	χ2 p-value for B73 x Mo17: '.0001571' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G177412	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	4	6	100.00%	60.00%	3	10	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.6547207' Biased in favor of strain: ''
GRMZM2G177400	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	0	1	100.00%	100.00%	7	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G177400	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	3	1	100.00%	25.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G177386	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.587953 x 10^-1	42	34	52	28	55.26%	35.00%	76	80	RefGen V2	χ2 p-value for B73 x Mo17: '.3587953' χ2 p-value for Mo17 x B73: '.0072904' Biased in favor of strain: ''
GRMZM2G177386	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.301102 x 10^-1	40	24	22	43	62.50%	66.15%	64	65	RefGen V2	χ2 p-value for B73 x Mo17: '.4794751' χ2 p-value for Mo17 x B73: '.9301102' Biased in favor of strain: ''
GRMZM2G177384	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	5	4	4	16.67%	50.00%	6	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0093742' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: ''
GRMZM2G177384	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1692	39	2347	36	97.75%	1.51%	1731	2383	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G177356	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G177356	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	3	0	100.00%	0.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G177349	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.25 x 10^-6	0	44	0	47	0.00%	100.00%	44	47	RefGen V2	χ2 p-value for B73 x Mo17: '6.54e-21' χ2 p-value for Mo17 x B73: '1.25e-06' Biased in favor of strain: 'Mo17'
GRMZM2G177349	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.09213 x 10^-2	2	10	0	29	16.67%	100.00%	12	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0209213' χ2 p-value for Mo17 x B73: '7.24e-08' Biased in favor of strain: 'Mo17'
GRMZM2G177340	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.115 x 10^-4	13	0	14	0	100.00%	0.00%	13	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0003115' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: 'B73'
GRMZM2G177340	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	0	100.00%	0.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G177324	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2606	267	1315	595	90.71%	31.15%	2873	1910	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G177324	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1742	508	1150	364	77.42%	24.04%	2250	1514	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G177314	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.06 x 10^-5	137	75	149	71	64.62%	32.27%	212	220	RefGen V2	χ2 p-value for B73 x Mo17: '.0000206' χ2 p-value for Mo17 x B73: '1.45e-07' Biased in favor of strain: 'B73'
GRMZM2G177314	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	5	0	100.00%	0.00%	4	5	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: ''
GRMZM2G177300	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.555449 x 10^-1	23	22	17	27	51.11%	61.36%	45	44	RefGen V2	χ2 p-value for B73 x Mo17: '.026854' χ2 p-value for Mo17 x B73: '.4555449' Biased in favor of strain: ''
GRMZM2G177300	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.961175 x 10^-1	71	41	31	28	63.39%	47.46%	112	59	RefGen V2	χ2 p-value for B73 x Mo17: '.0045864' χ2 p-value for Mo17 x B73: '.6961175' Biased in favor of strain: ''
GRMZM2G177298	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	3	8	66.67%	72.73%	6	11	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.131668' Biased in favor of strain: ''
GRMZM2G177298	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	0	6	0	100.00%	0.00%	10	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: ''
GRMZM2G177284	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.880742 x 10^-1	14	10	7	19	58.33%	73.08%	24	26	RefGen V2	χ2 p-value for B73 x Mo17: '.3864619' χ2 p-value for Mo17 x B73: '.4880742' Biased in favor of strain: ''
GRMZM2G177284	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.657724 x 10^-1	5	25	18	17	16.67%	48.57%	30	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0002607' χ2 p-value for Mo17 x B73: '.8657724' Biased in favor of strain: ''
GRMZM2G177276	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.82208 x 10^-2	336	212	304	255	61.31%	45.62%	548	559	RefGen V2	χ2 p-value for B73 x Mo17: '1.18e-07' χ2 p-value for Mo17 x B73: '.0382208' Biased in favor of strain: 'B73'
GRMZM2G177276	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.271245 x 10^-1	438	237	219	360	64.89%	62.18%	675	579	RefGen V2	χ2 p-value for B73 x Mo17: '.3271245' χ2 p-value for Mo17 x B73: '.0218977' Biased in favor of strain: ''
GRMZM2G177263	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.752759 x 10^-1	334	146	262	389	69.58%	59.75%	480	651	RefGen V2	χ2 p-value for B73 x Mo17: '.1752759' χ2 p-value for Mo17 x B73: '.000183' Biased in favor of strain: ''
GRMZM2G177263	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.642 x 10^-3	509	279	394	314	64.59%	44.35%	788	708	RefGen V2	χ2 p-value for B73 x Mo17: '2.54e-16' χ2 p-value for Mo17 x B73: '.002642' Biased in favor of strain: 'B73'
GRMZM2G177244	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.4841 x 10^-3	186	245	236	313	43.16%	57.01%	431	549	RefGen V2	χ2 p-value for B73 x Mo17: '.0044841' χ2 p-value for Mo17 x B73: '.0010152' Biased in favor of strain: 'Mo17'
GRMZM2G177244	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	2	57	0.00%	96.61%	2	59	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '1.07e-06' Biased in favor of strain: ''
GRMZM2G177242	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	5	2	6	58.33%	75.00%	12	8	RefGen V2	χ2 p-value for B73 x Mo17: '.5402792' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: ''
GRMZM2G177242	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	1	1	100.00%	50.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G177231	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.21 x 10^-7	636	428	658	483	59.77%	42.33%	1064	1141	RefGen V2	χ2 p-value for B73 x Mo17: '1.81e-10' χ2 p-value for Mo17 x B73: '2.21e-07' Biased in favor of strain: 'B73'
GRMZM2G177231	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.757352 x 10^-1	400	177	386	482	69.32%	55.53%	577	868	RefGen V2	χ2 p-value for B73 x Mo17: '.1757352' χ2 p-value for Mo17 x B73: '3.40e-12' Biased in favor of strain: ''
GRMZM2G177229	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1681	300	627	422	84.86%	40.23%	1981	1049	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G177229	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.17 x 10^-14	758	230	235	96	76.72%	29.00%	988	331	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.17e-14' Biased in favor of strain: 'B73'
GRMZM2G177227	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.772972 x 10^-1	17	3	9	16	85.00%	64.00%	20	25	RefGen V2	χ2 p-value for B73 x Mo17: '.081993' χ2 p-value for Mo17 x B73: '.7772972' Biased in favor of strain: ''
GRMZM2G177227	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.323268 x 10^-1	364	293	296	281	55.40%	48.70%	657	577	RefGen V2	χ2 p-value for B73 x Mo17: '.0056061' χ2 p-value for Mo17 x B73: '.5323268' Biased in favor of strain: ''
GRMZM2G177224	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4994	1409	2474	2633	77.99%	51.56%	6403	5107	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G177224	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5370	2258	4430	2187	70.40%	33.05%	7628	6617	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G177213	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.691714 x 10^-1	56	43	57	67	56.57%	54.03%	99	124	RefGen V2	χ2 p-value for B73 x Mo17: '.1913659' χ2 p-value for Mo17 x B73: '.3691714' Biased in favor of strain: ''
GRMZM2G177213	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173104 x 10^-1	22	7	8	10	75.86%	55.56%	29	18	RefGen V2	χ2 p-value for B73 x Mo17: '.2935207' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: ''
GRMZM2G177203	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G177203	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	0	0	66.67%		6	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G177198	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.668543 x 10^-1	9	3	10	7	75.00%	41.18%	12	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.4668543' Biased in favor of strain: ''
GRMZM2G177198	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	3	100.00%	100.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G177169	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.649147 x 10^-1	135	27	34	50	83.33%	59.52%	162	84	RefGen V2	χ2 p-value for B73 x Mo17: '6.80e-06' χ2 p-value for Mo17 x B73: '.1649147' Biased in favor of strain: ''
GRMZM2G177169	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.29 x 10^-5	136	77	211	45	63.85%	17.58%	213	256	RefGen V2	χ2 p-value for B73 x Mo17: '.0000529' χ2 p-value for Mo17 x B73: '3.22e-25' Biased in favor of strain: 'B73'
GRMZM2G177165	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.1512 x 10^-3	14	0	19	1	100.00%	5.00%	14	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0081512' χ2 p-value for Mo17 x B73: '4.91e-09' Biased in favor of strain: 'B73'
GRMZM2G177165	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.89475 x 10^-2	23	7	14	5	76.67%	26.32%	30	19	RefGen V2	χ2 p-value for B73 x Mo17: '.003487' χ2 p-value for Mo17 x B73: '.0389475' Biased in favor of strain: 'B73'
GRMZM2G177151	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.530367 x 10^-1	575	307	293	687	65.19%	70.10%	882	980	RefGen V2	χ2 p-value for B73 x Mo17: '.3530367' χ2 p-value for Mo17 x B73: '.0225274' Biased in favor of strain: ''
GRMZM2G177151	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.125 x 10^-4	295	162	184	117	64.55%	38.87%	457	301	RefGen V2	χ2 p-value for B73 x Mo17: '4.92e-10' χ2 p-value for Mo17 x B73: '.0001125' Biased in favor of strain: 'B73'
GRMZM2G177110	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.075 x 10^-4	30	0	23	1	100.00%	4.17%	30	24	RefGen V2	χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '8.29e-11' Biased in favor of strain: 'B73'
GRMZM2G177110	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.075 x 10^-4	24	1	19	2	96.00%	9.52%	25	21	RefGen V2	χ2 p-value for B73 x Mo17: '4.22e-06' χ2 p-value for Mo17 x B73: '.0002075' Biased in favor of strain: 'B73'

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