Displaying data sets 101601 - 101700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G43340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '255.133'
Avg. expression score in LCM sample: '168.644'
Tissue used: 'full endosperm'
AT2G43340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '80.4797'
Avg. embryo expression (LCM): '76.2808'
AT2G43330 INT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 1 1 33.33% 50.00% 3 2 TAIR8 Avg. embryo expression (dissected): '103.122'
Avg. embryo expression (LCM): '46.9063'
AT2G43330 INT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7291 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43330 INT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 2 4 100.00% 66.67% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.288877'
Avg. expression score for this sample: '63.9392'
Avg. expression score in LCM sample: '36.833'
Tissue used: 'pure endosperm, no chalazal'
AT2G43330 INT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.21473 x 10-1 4 9 4 4 30.77% 50.00% 13 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.288877'
Avg. expression score for this sample: '71.6984'
Avg. expression score in LCM sample: '36.833'
Tissue used: 'full endosperm'
AT2G43330 INT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.1874 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43330 INT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.44245 x 10-1 24 4 85.71% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.157 x 10-2 32 3 91.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2463 x 10-2 48 23 6 62 67.61% 91.18% 71 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.051199'
Avg. expression score for this sample: '141.269'
Avg. expression score in LCM sample: '15.7856'
Tissue used: 'full endosperm'
AT2G43320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.23036 x 10-1 13 16 5 5 44.83% 50.00% 29 10 TAIR8 Avg. embryo expression (dissected): '48.9589'
Avg. embryo expression (LCM): '35.704'
AT2G43320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.52237 x 10-1 36 20 8 28 64.29% 77.78% 56 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.051199'
Avg. expression score for this sample: '61.8814'
Avg. expression score in LCM sample: '15.7856'
Tissue used: 'pure endosperm, no chalazal'
AT2G43320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0414 x 10-2 23 1 95.83% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.9575'
Avg. expression score in LCM sample: '1.86664'
Tissue used: 'pure endosperm, no chalazal'
AT2G43310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.2239'
Avg. expression score in LCM sample: '1.86664'
Tissue used: 'full endosperm'
AT2G43310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '13.2616'
Avg. embryo expression (LCM): '3.18988'
AT2G43300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G43300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G43300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G43290 MSS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.94157 x 10-1 9 6 1 23 60.00% 95.83% 15 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.190671'
Avg. expression score for this sample: '2126.1'
Avg. expression score in LCM sample: '140.336'
Tissue used: 'full endosperm'
AT2G43290 MSS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.30108 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43290 MSS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.30108 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43290 MSS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28308 x 10-1 3 8 1 1 27.27% 50.00% 11 2 TAIR8 Avg. embryo expression (dissected): '839.746'
Avg. embryo expression (LCM): '118.641'
AT2G43290 MSS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0732 x 10-2 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43290 MSS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 2 6 66.67% 75.00% 6 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.190671'
Avg. expression score for this sample: '835.239'
Avg. expression score in LCM sample: '140.336'
Tissue used: 'pure endosperm, no chalazal'
AT2G43280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '149.258'
Avg. expression score in LCM sample: '69.9033'
Tissue used: 'pure endosperm, no chalazal'
AT2G43280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '131.13'
Avg. expression score in LCM sample: '69.9033'
Tissue used: 'full endosperm'
AT2G43280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '148.33'
Avg. embryo expression (LCM): '173.057'
AT2G43270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.39139'
Avg. embryo expression (LCM): '0'
AT2G43270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.02673 x 10-1 26 9 74.29% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 1 1 60.00% 50.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.277157'
Avg. expression score for this sample: '5.77398'
Avg. expression score in LCM sample: '1.26402'
Tissue used: 'pure endosperm, no chalazal'
AT2G43270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0741 x 10-2 12 0 0 2 100.00% 100.00% 12 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.277157'
Avg. expression score for this sample: '3.83652'
Avg. expression score in LCM sample: '1.26402'
Tissue used: 'full endosperm'
AT2G43270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 18 4 81.82% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43261 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43261 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43261 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.652 x 10-3 13 0 1 18 100.00% 94.74% 13 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002652'
Avg. expression score for this sample: '27.3534'
Avg. expression score in LCM sample: '1.55798'
Tissue used: 'full endosperm'
AT2G43261 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G43261 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002652'
Avg. expression score for this sample: '1.63755'
Avg. expression score in LCM sample: '1.55798'
Tissue used: 'pure endosperm, no chalazal'
AT2G43261 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.64967 x 10-1 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 2 3 66.67% 60.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.569956'
Avg. expression score for this sample: '184.571'
Avg. expression score in LCM sample: '81.838'
Tissue used: 'pure endosperm, no chalazal'
AT2G43260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.14098 x 10-1 11 2 2 8 84.62% 80.00% 13 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.569956'
Avg. expression score for this sample: '156.107'
Avg. expression score in LCM sample: '81.838'
Tissue used: 'full endosperm'
AT2G43260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.42837 x 10-1 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.64439 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 3 3 1 70.00% 25.00% 10 4 TAIR8 Avg. embryo expression (dissected): '175.536'
Avg. embryo expression (LCM): '152.135'
AT2G43255 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G43255 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G43255 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43255 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43255 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43255 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.317696'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G43250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.51159 x 10-1 305 55 158 162 84.72% 50.62% 360 320 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.476739'
Avg. expression score for this sample: '98.5241'
Avg. expression score in LCM sample: '29.6457'
Tissue used: 'full endosperm'
AT2G43250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 809 79 91.10% 888 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.30351 x 10-1 24 7 77.42% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.12817 x 10-1 75 28 26 7 72.82% 21.21% 103 33 TAIR8 Avg. embryo expression (dissected): '45.4599'
Avg. embryo expression (LCM): '26.3856'
AT2G43250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.32731 x 10-1 525 248 67.92% 773 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.15972 x 10-1 84 16 50 53 84.00% 51.46% 100 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.476739'
Avg. expression score for this sample: '41.4718'
Avg. expression score in LCM sample: '29.6457'
Tissue used: 'pure endosperm, no chalazal'
AT2G43240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 24 6 13 15 80.00% 53.57% 30 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.245926'
Avg. expression score for this sample: '26.8142'
Avg. expression score in LCM sample: '44.9315'
Tissue used: 'pure endosperm, no chalazal'
AT2G43240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.8799 x 10-2 51 8 86.44% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-7 118 3 97.52% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.5231 x 10-2 22 1 9 22 95.65% 70.97% 23 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.245926'
Avg. expression score for this sample: '27.4059'
Avg. expression score in LCM sample: '44.9315'
Tissue used: 'full endosperm'
AT2G43240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.83887 x 10-1 21 11 3 7 65.62% 70.00% 32 10 TAIR8 Avg. embryo expression (dissected): '31.4267'
Avg. embryo expression (LCM): '19.1895'
AT2G43235 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.36461 x 10-1 2 9 2 1 18.18% 33.33% 11 3 TAIR8 Avg. embryo expression (dissected): '66.6531'
Avg. embryo expression (LCM): '81.9196'
AT2G43235 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.74904 x 10-1 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35117 x 10-1 2 1 1 7 66.67% 87.50% 3 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731094'
Avg. expression score for this sample: '27.6259'
Avg. expression score in LCM sample: '12.4638'
Tissue used: 'pure endosperm, no chalazal'
AT2G43235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 2 1 2 66.67% 66.67% 6 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731094'
Avg. expression score for this sample: '28.2703'
Avg. expression score in LCM sample: '12.4638'
Tissue used: 'full endosperm'
AT2G43235 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8083 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43235 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.9263'
Avg. expression score in LCM sample: '.881875'
Tissue used: 'full endosperm'
AT2G43230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.59456'
Avg. embryo expression (LCM): '.753515'
AT2G43230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.41067'
Avg. expression score in LCM sample: '.881875'
Tissue used: 'pure endosperm, no chalazal'
AT2G43230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G43220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G43220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.901345'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G43220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.394 x 10-3 0 11 0.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.3 x 10-7 32 0 100.00% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.72584 x 10-1 11 0 12 0 100.00% 0.00% 11 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.212743'
Avg. expression score for this sample: '159.606'
Avg. expression score in LCM sample: '26.3093'
Tissue used: 'full endosperm'
AT2G43210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '54.8628'
Avg. embryo expression (LCM): '34.737'
AT2G43210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.375 x 10-3 0 12 0.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G43210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.09859 x 10-1 5 0 5 0 100.00% 0.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.212743'
Avg. expression score for this sample: '77.3586'
Avg. expression score in LCM sample: '26.3093'
Tissue used: 'pure endosperm, no chalazal'