Displaying data sets 100801 - 100900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G44540 GH9B9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44540 GH9B9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 190 85 69.09% 275 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44540 GH9B9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.113506'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G44540 GH9B9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.182134'
Avg. embryo expression (LCM): '0'
AT2G44540 GH9B9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 286 93 75.46% 379 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44540 GH9B9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G44530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '48.9495'
Avg. expression score in LCM sample: '18.8133'
Tissue used: 'pure endosperm, no chalazal'
AT2G44530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '102.749'
Avg. expression score in LCM sample: '18.8133'
Tissue used: 'full endosperm'
AT2G44530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '115.914'
Avg. embryo expression (LCM): '126.226'
AT2G44525 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 0 3 33.33% 100.00% 3 3 TAIR8 Avg. embryo expression (dissected): '26.1379'
Avg. embryo expression (LCM): '16.502'
AT2G44525 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.90605 x 10-1 13 5 4 12 72.22% 75.00% 18 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '54.6443'
Avg. expression score in LCM sample: '19.3131'
Tissue used: 'full endosperm'
AT2G44525 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.90244 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44525 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8097 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.85714 x 10-1 1 2 1 0 33.33% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.7634'
Avg. expression score in LCM sample: '19.3131'
Tissue used: 'pure endosperm, no chalazal'
AT2G44520 COX10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 4 11 17 73.33% 60.71% 15 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.883095'
Avg. expression score for this sample: '34.8752'
Avg. expression score in LCM sample: '36.833'
Tissue used: 'pure endosperm, no chalazal'
AT2G44520 COX10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.3069 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44520 COX10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.33 x 10-3 97 16 85.84% 113 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44520 COX10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.00223 x 10-1 23 12 6 22 65.71% 78.57% 35 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.883095'
Avg. expression score for this sample: '34.7363'
Avg. expression score in LCM sample: '36.833'
Tissue used: 'full endosperm'
AT2G44520 COX10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.15524 x 10-1 21 11 6 10 65.62% 62.50% 32 16 TAIR8 Avg. embryo expression (dissected): '51.7459'
Avg. embryo expression (LCM): '65.3172'
AT2G44520 COX10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.44748 x 10-1 71 23 75.53% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.072'
Avg. expression score in LCM sample: '8.98043'
Tissue used: 'full endosperm'
AT2G44510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '20.4218'
Avg. embryo expression (LCM): '96.902'
AT2G44510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.50485'
Avg. expression score in LCM sample: '8.98043'
Tissue used: 'pure endosperm, no chalazal'
AT2G44510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.09907 x 10-1 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000369'
Avg. expression score for this sample: '17.2895'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G44500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '16.9178'
Avg. embryo expression (LCM): '2.87591'
AT2G44500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.65692 x 10-1 25 6 80.65% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6 x 10-4 35 3 8 56 92.11% 87.50% 38 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000369'
Avg. expression score for this sample: '171.42'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G44490 PEN2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.40808'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G44490 PEN2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.68034'
Avg. embryo expression (LCM): '0'
AT2G44490 PEN2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44490 PEN2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.68474'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G44490 PEN2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44490 PEN2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44480 BGLU17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44480 BGLU17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G44480 BGLU17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44480 BGLU17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44480 BGLU17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.415837'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G44480 BGLU17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G44470 BGLU29 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 79 90 38 48 46.75% 55.81% 169 86 TAIR8 Avg. embryo expression (dissected): '760.513'
Avg. embryo expression (LCM): '292.477'
AT2G44470 BGLU29 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-22 201 10 95.26% 211 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44470 BGLU29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.05956 x 10-1 1297 737 742 1800 63.77% 70.81% 2034 2542 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.371212'
Avg. expression score for this sample: '2279.3'
Avg. expression score in LCM sample: '1096.11'
Tissue used: 'full endosperm'
AT2G44470 BGLU29 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.329 x 10-3 208 69 75.09% 277 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44470 BGLU29 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 958 48 95.23% 1006 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44470 BGLU29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 333 186 200 435 64.16% 68.50% 519 635 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.371212'
Avg. expression score for this sample: '2079.31'
Avg. expression score in LCM sample: '1096.11'
Tissue used: 'pure endosperm, no chalazal'
AT2G44460 BGLU28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.661884'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G44460 BGLU28 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44460 BGLU28 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 41 1 97.62% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44460 BGLU28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.905565'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G44460 BGLU28 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.149882'
Avg. embryo expression (LCM): '0'
AT2G44460 BGLU28 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44450 BGLU15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.9 x 10-19 1178 208 84.99% 1386 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44450 BGLU15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9 x 10-10 508 205 187 777 71.25% 80.60% 713 964 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.7e-06'
Avg. expression score for this sample: '788.314'
Avg. expression score in LCM sample: '213.517'
Tissue used: 'full endosperm'
AT2G44450 BGLU15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.99187 x 10-1 44 41 12 18 51.76% 60.00% 85 30 TAIR8 Avg. embryo expression (dissected): '117.631'
Avg. embryo expression (LCM): '63.5841'
AT2G44450 BGLU15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-23 1254 200 86.24% 1454 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44450 BGLU15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.94037 x 10-1 229 118 159 275 65.99% 63.36% 347 434 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.7e-06'
Avg. expression score for this sample: '484.452'
Avg. expression score in LCM sample: '213.517'
Tissue used: 'pure endosperm, no chalazal'
AT2G44450 BGLU15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.25678 x 10-1 102 29 77.86% 131 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44440 EML4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.70055 x 10-1 68 42 61.82% 110 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44440 EML4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6 x 10-17 430 66 86.69% 496 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44440 EML4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.56085 x 10-1 262 102 139 275 71.98% 66.43% 364 414 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.371541'
Avg. expression score for this sample: '180.813'
Avg. expression score in LCM sample: '82.4406'
Tissue used: 'pure endosperm, no chalazal'
AT2G44440 EML4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.71674 x 10-1 137 115 70 58 54.37% 45.31% 252 128 TAIR8 Avg. embryo expression (dissected): '163.238'
Avg. embryo expression (LCM): '125.937'
AT2G44440 EML4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.56 x 10-4 200 142 58.48% 342 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44440 EML4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.80901 x 10-1 236 123 115 257 65.74% 69.09% 359 372 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.371541'
Avg. expression score for this sample: '125.578'
Avg. expression score in LCM sample: '82.4406'
Tissue used: 'full endosperm'
AT2G44430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3 x 10-5 319 74 125 314 81.17% 71.53% 393 439 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003299'
Avg. expression score for this sample: '512.085'
Avg. expression score in LCM sample: '140.747'
Tissue used: 'full endosperm'
AT2G44430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.1162 x 10-1 53 19 35 22 73.61% 38.60% 72 57 TAIR8 Avg. embryo expression (dissected): '144.211'
Avg. embryo expression (LCM): '56.6894'
AT2G44430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.613 x 10-3 211 55 79.32% 266 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 279 79 193 267 77.93% 58.04% 358 460 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003299'
Avg. expression score for this sample: '642.208'
Avg. expression score in LCM sample: '140.747'
Tissue used: 'pure endosperm, no chalazal'
AT2G44430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.8959 x 10-2 91 21 81.25% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.1 x 10-27 375 22 94.46% 397 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.7512'
Avg. expression score in LCM sample: '8.73056'
Tissue used: 'pure endosperm, no chalazal'
AT2G44420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.4034'
Avg. expression score in LCM sample: '8.73056'
Tissue used: 'full endosperm'
AT2G44420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '14.0926'
Avg. embryo expression (LCM): '14.9196'
AT2G44410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.60821 x 10-1 106 75 34 25 58.56% 42.37% 181 59 TAIR8 Avg. embryo expression (dissected): '353.74'
Avg. embryo expression (LCM): '253.018'
AT2G44410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5646 x 10-2 302 148 67.11% 450 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.823 x 10-3 270 94 128 338 74.18% 72.53% 364 466 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003044'
Avg. expression score for this sample: '669.071'
Avg. expression score in LCM sample: '292.797'
Tissue used: 'full endosperm'
AT2G44410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.41646 x 10-1 68 36 65.38% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4 x 10-12 410 58 87.61% 468 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.29814 x 10-1 140 57 66 149 71.07% 69.30% 197 215 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003044'
Avg. expression score for this sample: '412.144'
Avg. expression score in LCM sample: '292.797'
Tissue used: 'pure endosperm, no chalazal'
AT2G44400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G44400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.759676'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G44400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 0 0 3 0 0.00% 0 3 TAIR8 Avg. embryo expression (dissected): '5.0757'
Avg. embryo expression (LCM): '0'
AT2G44400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.01671'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G44390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G44390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'