Displaying data sets 100601 - 100700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G44850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.46305 x 10-1 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 0 1 0 100.00% 0.00% 6 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.438433'
Avg. expression score for this sample: '8.40201'
Avg. expression score in LCM sample: '12.2728'
Tissue used: 'pure endosperm, no chalazal'
AT2G44840 ERF13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.41987'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G44840 ERF13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '140.368'
Avg. embryo expression (LCM): '2.70009'
AT2G44840 ERF13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44840 ERF13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44840 ERF13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '28.085'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G44840 ERF13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.21655 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 49 17 23 29 74.24% 55.77% 66 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.829602'
Avg. expression score for this sample: '132.766'
Avg. expression score in LCM sample: '160.825'
Tissue used: 'full endosperm'
AT2G44830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.62557 x 10-1 29 11 72.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.88408 x 10-1 38 53 7 14 41.76% 66.67% 91 21 TAIR8 Avg. embryo expression (dissected): '398.806'
Avg. embryo expression (LCM): '327.364'
AT2G44830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.63401 x 10-1 24 12 15 23 66.67% 60.53% 36 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.829602'
Avg. expression score for this sample: '200.286'
Avg. expression score in LCM sample: '160.825'
Tissue used: 'pure endosperm, no chalazal'
AT2G44830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.4897 x 10-1 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.15524 x 10-1 26 13 4 4 66.67% 50.00% 39 8 TAIR8 Avg. embryo expression (dissected): '259.934'
Avg. embryo expression (LCM): '378.553'
AT2G44820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 112 33 77.24% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.35699 x 10-1 37 9 7 11 80.43% 61.11% 46 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.016393'
Avg. expression score for this sample: '196.696'
Avg. expression score in LCM sample: '67.9044'
Tissue used: 'pure endosperm, no chalazal'
AT2G44820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.4609 x 10-2 54 9 22 57 85.71% 72.15% 63 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.016393'
Avg. expression score for this sample: '319.953'
Avg. expression score in LCM sample: '67.9044'
Tissue used: 'full endosperm'
AT2G44820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.9071 x 10-2 150 66 69.44% 216 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44810 DAD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44810 DAD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44444 x 10-1 1 0 0 4 100.00% 100.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '3.50485'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G44810 DAD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '5.23742'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G44810 DAD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.60292'
Avg. embryo expression (LCM): '0'
AT2G44810 DAD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44810 DAD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '29.0495'
Avg. embryo expression (LCM): '8.76589'
AT2G44800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.9447'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G44800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.8081'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G44800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44798 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44798 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.9794'
Avg. expression score in LCM sample: '6.3495'
Tissue used: 'full endosperm'
AT2G44798 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44798 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '32.4622'
Avg. embryo expression (LCM): '21.7012'
AT2G44798 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44798 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.3006'
Avg. expression score in LCM sample: '6.3495'
Tissue used: 'pure endosperm, no chalazal'
AT2G44790 UCC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '80.2289'
Avg. expression score in LCM sample: '3.05717'
Tissue used: 'pure endosperm, no chalazal'
AT2G44790 UCC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.68271'
Avg. embryo expression (LCM): '0'
AT2G44790 UCC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44790 UCC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44790 UCC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '449.795'
Avg. expression score in LCM sample: '3.05717'
Tissue used: 'full endosperm'
AT2G44790 UCC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.0 x 10-12 28 70 28.57% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.74199 x 10-1 136 3 82 22 97.84% 21.15% 139 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '68.2607'
Avg. expression score in LCM sample: '32.2178'
Tissue used: 'full endosperm'
AT2G44770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8 x 10-18 140 2 98.59% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.05 x 10-4 62 7 12 1 89.86% 7.69% 69 13 TAIR8 Avg. embryo expression (dissected): '55.9973'
Avg. embryo expression (LCM): '59.7663'
AT2G44770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.08419 x 10-1 91 3 39 8 96.81% 17.02% 94 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.6781'
Avg. expression score in LCM sample: '32.2178'
Tissue used: 'pure endosperm, no chalazal'
AT2G44770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.9 x 10-5 6 20 23.08% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.5094 x 10-2 7 14 33.33% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.0688 x 10-2 57 28 16 17 67.06% 51.52% 85 33 TAIR8 Avg. embryo expression (dissected): '983.568'
Avg. embryo expression (LCM): '641.203'
AT2G44760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.5 x 10-13 82 5 94.25% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.3345 x 10-2 45 26 43 43 63.38% 50.00% 71 86 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004286'
Avg. expression score for this sample: '666.584'
Avg. expression score in LCM sample: '164.528'
Tissue used: 'pure endosperm, no chalazal'
AT2G44760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9828 x 10-2 68 12 83 54 85.00% 39.42% 80 137 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004286'
Avg. expression score for this sample: '465.89'
Avg. expression score in LCM sample: '164.528'
Tissue used: 'full endosperm'
AT2G44760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.03074 x 10-1 30 30 50.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44750 TPK2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44750 TPK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '50.4663'
Avg. expression score in LCM sample: '8.84814'
Tissue used: 'full endosperm'
AT2G44750 TPK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.5967'
Avg. expression score in LCM sample: '8.84814'
Tissue used: 'pure endosperm, no chalazal'
AT2G44750 TPK2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '34.4436'
Avg. embryo expression (LCM): '57.9453'
AT2G44750 TPK2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44750 TPK2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44745 WRKY12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44745 WRKY12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G44745 WRKY12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G44745 WRKY12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44745 WRKY12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G44745 WRKY12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44740 CYCP4;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-26 194 0 100.00% 194 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44740 CYCP4;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7805 x 10-2 34 10 20 81 77.27% 80.20% 44 101 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.668494'
Avg. expression score for this sample: '123.145'
Avg. expression score in LCM sample: '220.469'
Tissue used: 'full endosperm'
AT2G44740 CYCP4;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 19 8 70.37% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44740 CYCP4;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.50034 x 10-1 8 7 5 11 53.33% 68.75% 15 16 TAIR8 Avg. embryo expression (dissected): '52.2813'
Avg. embryo expression (LCM): '1.25586'
AT2G44740 CYCP4;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 379 2 99.48% 381 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44740 CYCP4;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.94457 x 10-1 91 69 43 99 56.88% 69.72% 160 142 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.668494'
Avg. expression score for this sample: '279.629'
Avg. expression score in LCM sample: '220.469'
Tissue used: 'pure endosperm, no chalazal'
AT2G44735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.89435'
Avg. expression score in LCM sample: '1.98422'
Tissue used: 'pure endosperm, no chalazal'
AT2G44735 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.34446'
Avg. embryo expression (LCM): '0'
AT2G44735 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44735 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.39796'
Avg. expression score in LCM sample: '1.98422'
Tissue used: 'full endosperm'
AT2G44735 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1931 276 87.49% 2207 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 3801 1161 1195 3578 76.60% 74.96% 4962 4773 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.3e-32'
Avg. expression score for this sample: '1870.89'
Avg. expression score in LCM sample: '448.566'
Tissue used: 'full endosperm'
AT2G44730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3924 290 93.12% 4214 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.66612 x 10-1 1756 1576 710 524 52.70% 42.46% 3332 1234 TAIR8 Avg. embryo expression (dissected): '1937.88'
Avg. embryo expression (LCM): '685.008'
AT2G44730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.001 x 10-3 4665 1756 1959 3479 72.65% 63.98% 6421 5438 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.3e-32'
Avg. expression score for this sample: '3116.95'
Avg. expression score in LCM sample: '448.566'
Tissue used: 'pure endosperm, no chalazal'
AT2G44730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.52774 x 10-1 683 255 72.81% 938 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.84561 x 10-1 271 108 71.50% 379 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.79411 x 10-1 449 505 243 268 47.06% 52.45% 954 511 TAIR8 Avg. embryo expression (dissected): '649.985'
Avg. embryo expression (LCM): '346.353'
AT2G44710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-8 1736 533 76.51% 2269 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.2181 x 10-2 886 498 448 1213 64.02% 73.03% 1384 1661 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000016'
Avg. expression score for this sample: '780.523'
Avg. expression score in LCM sample: '255.729'
Tissue used: 'pure endosperm, no chalazal'
AT2G44710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-5 862 442 371 1210 66.10% 76.53% 1304 1581 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000016'
Avg. expression score for this sample: '576.535'
Avg. expression score in LCM sample: '255.729'
Tissue used: 'full endosperm'
AT2G44710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.61 x 10-4 1691 578 74.53% 2269 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '46.7002'
Avg. expression score in LCM sample: '17.2701'
Tissue used: 'full endosperm'
AT2G44700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.8969'
Avg. expression score in LCM sample: '17.2701'
Tissue used: 'pure endosperm, no chalazal'
AT2G44700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.1731'
Avg. embryo expression (LCM): '15.8992'
AT2G44700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44690 ARAC9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G44690 ARAC9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '29.1093'
Avg. embryo expression (LCM): '29.7136'