| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G45930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.36985' Avg. expression score for this sample: '3.14571' Avg. expression score in LCM sample: '14.5656' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G45930 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.08 x 10-4 | 26 | 0 | 100.00% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.1927 x 10-1 | 0 | 0 | 5 | 3 | 37.50% | 0 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.36985' Avg. expression score for this sample: '4.74362' Avg. expression score in LCM sample: '14.5656' Tissue used: 'full endosperm' |
||||||
| AT2G45930 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '1.13481' Avg. embryo expression (LCM): '0' |
|||||
| AT2G45930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.96503 x 10-1 | 0 | 3 | 0.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-11 | 243 | 3 | 98.78% | 246 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.3 x 10-27 | 411 | 62 | 27 | 295 | 86.89% | 91.61% | 473 | 322 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '4.1e-25' Avg. expression score for this sample: '289.138' Avg. expression score in LCM sample: '20.0921' Tissue used: 'full endosperm' |
|||||
| AT2G45920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.25624 x 10-1 | 76 | 10 | 88.37% | 86 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45920 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.23074 x 10-1 | 92 | 87 | 58 | 74 | 51.40% | 56.06% | 179 | 132 | TAIR8 |
Avg. embryo expression (dissected): '237.739' Avg. embryo expression (LCM): '61.2231' |
||||
| AT2G45920 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.3 x 10-21 | 561 | 8 | 98.59% | 569 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.3119 x 10-2 | 121 | 32 | 37 | 102 | 79.08% | 73.38% | 153 | 139 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '4.1e-25' Avg. expression score for this sample: '165.658' Avg. expression score in LCM sample: '20.0921' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G45910 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 7 | 5 | 4 | 10 | 58.33% | 71.43% | 12 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.160132' Avg. expression score for this sample: '58.1297' Avg. expression score in LCM sample: '37.9353' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G45910 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.7341 x 10-2 | 18 | 0 | 100.00% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45910 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 0 | 3 | 0 | 1 | 0.00% | 100.00% | 3 | 1 | TAIR8 |
Avg. embryo expression (dissected): '39.8474' Avg. embryo expression (LCM): '34.4231' |
||||
| AT2G45910 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.0411 x 10-2 | 13 | 5 | 4 | 33 | 72.22% | 89.19% | 18 | 37 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.160132' Avg. expression score for this sample: '87.8201' Avg. expression score in LCM sample: '37.9353' Tissue used: 'full endosperm' |
|||||
| AT2G45910 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.01221 x 10-1 | 10 | 0 | 100.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45910 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45900 | TRM13 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45900 | TRM13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.46935 x 10-1 | 0 | 3 | 3 | 3 | 0.00% | 50.00% | 3 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.240482' Avg. expression score for this sample: '20.6813' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||
| AT2G45900 | TRM13 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 6 | 3 | 2 | 1 | 66.67% | 33.33% | 9 | 3 | TAIR8 |
Avg. embryo expression (dissected): '78.0077' Avg. embryo expression (LCM): '12.2321' |
|||
| AT2G45900 | TRM13 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.16667 x 10-1 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45900 | TRM13 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45900 | TRM13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.240482' Avg. expression score for this sample: '5.85335' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G45890 | ROPGEF4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.26542' Avg. expression score in LCM sample: '17.6963' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G45890 | ROPGEF4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45890 | ROPGEF4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45890 | ROPGEF4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.56147' Avg. expression score in LCM sample: '17.6963' Tissue used: 'full endosperm' |
||||
| AT2G45890 | ROPGEF4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45890 | ROPGEF4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.47176' Avg. embryo expression (LCM): '0' |
|||||
| AT2G45880 | BAM7 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 20 | 24 | 4 | 8 | 45.45% | 66.67% | 44 | 12 | TAIR8 |
Avg. embryo expression (dissected): '151.153' Avg. embryo expression (LCM): '45.0602' |
|||
| AT2G45880 | BAM7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.30386 x 10-1 | 15 | 15 | 20 | 36 | 50.00% | 64.29% | 30 | 56 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.470473' Avg. expression score for this sample: '75.246' Avg. expression score in LCM sample: '97.1973' Tissue used: 'full endosperm' |
||||
| AT2G45880 | BAM7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.3609 x 10-2 | 45 | 14 | 76.27% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45880 | BAM7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.59699 x 10-1 | 7 | 1 | 87.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45880 | BAM7 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.5 x 10-10 | 65 | 1 | 98.48% | 66 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45880 | BAM7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 24 | 14 | 8 | 19 | 63.16% | 70.37% | 38 | 27 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.470473' Avg. expression score for this sample: '159.624' Avg. expression score in LCM sample: '97.1973' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G45870 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.60574 x 10-1 | 55 | 30 | 36 | 62 | 64.71% | 63.27% | 85 | 98 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.287995' Avg. expression score for this sample: '114.79' Avg. expression score in LCM sample: '24.8689' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G45870 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.37 x 10-4 | 54 | 9 | 85.71% | 63 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45870 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 3 | 62.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45870 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.27388 x 10-1 | 60 | 33 | 24 | 27 | 64.52% | 52.94% | 93 | 51 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.287995' Avg. expression score for this sample: '65.2167' Avg. expression score in LCM sample: '24.8689' Tissue used: 'full endosperm' |
|||||
| AT2G45870 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.7076 x 10-2 | 86 | 49 | 23 | 23 | 63.70% | 50.00% | 135 | 46 | TAIR8 |
Avg. embryo expression (dissected): '174.081' Avg. embryo expression (LCM): '106.271' |
||||
| AT2G45870 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.92929 x 10-1 | 49 | 27 | 64.47% | 76 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45860 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.506 x 10-3 | 45 | 43 | 51.14% | 88 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45860 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.30316 x 10-1 | 21 | 5 | 18 | 34 | 80.77% | 65.38% | 26 | 52 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.622315' Avg. expression score for this sample: '101.971' Avg. expression score in LCM sample: '7.20198' Tissue used: 'full endosperm' |
|||||
| AT2G45860 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.07186 x 10-1 | 6 | 5 | 54.55% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45860 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 4 | 0 | 1 | 33.33% | 100.00% | 6 | 1 | TAIR8 |
Avg. embryo expression (dissected): '68.8589' Avg. embryo expression (LCM): '169.29' |
||||
| AT2G45860 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.57865 x 10-1 | 51 | 13 | 79.69% | 64 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45860 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 1 | 3 | 75.00% | 75.00% | 4 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.622315' Avg. expression score for this sample: '31.0956' Avg. expression score in LCM sample: '7.20198' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G45850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 1 | 2 | 3 | 50.00% | 60.00% | 2 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '16.2007' Avg. expression score in LCM sample: '3.13066' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G45850 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 2 | 71.43% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45850 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 22 | 18 | 12 | 8 | 55.00% | 40.00% | 40 | 20 | TAIR8 |
Avg. embryo expression (dissected): '100.073' Avg. embryo expression (LCM): '63.4585' |
||||
| AT2G45850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 12 | 0 | 8 | 4 | 100.00% | 33.33% | 12 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '45.3813' Avg. expression score in LCM sample: '3.13066' Tissue used: 'full endosperm' |
|||||
| AT2G45850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.90392 x 10-1 | 7 | 2 | 77.78% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45840 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45840 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.05 x 10-4 | 29 | 2 | 0 | 24 | 93.55% | 100.00% | 31 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000105' Avg. expression score for this sample: '145.273' Avg. expression score in LCM sample: '3.5275' Tissue used: 'full endosperm' |
|||||
| AT2G45840 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.697469' Avg. embryo expression (LCM): '0' |
||||||
| AT2G45840 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45840 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 25 | 0 | 100.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45840 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000105' Avg. expression score for this sample: '30.2877' Avg. expression score in LCM sample: '3.5275' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G45830 | DTA2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.5372 x 10-1 | 28 | 22 | 15 | 66 | 56.00% | 81.48% | 50 | 81 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.829161' Avg. expression score for this sample: '525.049' Avg. expression score in LCM sample: '1450.93' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G45830 | DTA2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.19797 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45830 | DTA2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45830 | DTA2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.15251 x 10-1 | 4 | 13 | 12 | 36 | 23.53% | 75.00% | 17 | 48 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.829161' Avg. expression score for this sample: '230.543' Avg. expression score in LCM sample: '1450.93' Tissue used: 'full endosperm' |
||||
| AT2G45830 | DTA2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.54349 x 10-1 | 3 | 2 | 60.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45830 | DTA2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.95098 x 10-1 | 6 | 4 | 1 | 2 | 60.00% | 66.67% | 10 | 3 | TAIR8 |
Avg. embryo expression (dissected): '39.1493' Avg. embryo expression (LCM): '22.304' |
|||
| AT2G45820 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '289.766' Avg. embryo expression (LCM): '115.865' |
||||||
| AT2G45820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '673.109' Avg. expression score in LCM sample: '41.845' Tissue used: 'full endosperm' |
|||||||
| AT2G45820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45820 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '757.813' Avg. expression score in LCM sample: '41.845' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G45810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 39 | 16 | 19 | 33 | 70.91% | 63.46% | 55 | 52 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.018628' Avg. expression score for this sample: '313.594' Avg. expression score in LCM sample: '183.797' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G45810 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.6 x 10-17 | 364 | 27 | 93.09% | 391 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.1909 x 10-2 | 36 | 6 | 85.71% | 42 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0084 x 10-2 | 137 | 51 | 101 | 289 | 72.87% | 74.10% | 188 | 390 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.018628' Avg. expression score for this sample: '338.637' Avg. expression score in LCM sample: '183.797' Tissue used: 'full endosperm' |
|||||
| AT2G45810 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.98962 x 10-1 | 52 | 42 | 18 | 11 | 55.32% | 37.93% | 94 | 29 | TAIR8 |
Avg. embryo expression (dissected): '552.79' Avg. embryo expression (LCM): '395.871' |
||||
| AT2G45810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.54597 x 10-1 | 271 | 81 | 76.99% | 352 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45800 | PLIM2a | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45800 | PLIM2a | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.65447' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G45800 | PLIM2a | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45800 | PLIM2a | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.61873' Avg. embryo expression (LCM): '0' |
|||||
| AT2G45800 | PLIM2a | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45800 | PLIM2a | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '6.16989' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G45790 | PMM | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '15.9802' Avg. expression score in LCM sample: '18.7545' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G45790 | PMM | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45790 | PMM | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '18.3154' Avg. embryo expression (LCM): '35.4905' |
|||||
| AT2G45790 | PMM | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '21.8434' Avg. expression score in LCM sample: '18.7545' Tissue used: 'full endosperm' |
||||||
| AT2G45790 | PMM | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45790 | PMM | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 0 | 1 | 0 | 100.00% | 0.00% | 4 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.768813' Avg. expression score for this sample: '22.9945' Avg. expression score in LCM sample: '238.341' Tissue used: 'full endosperm' |
|||||
| AT2G45780 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '7.96502' Avg. embryo expression (LCM): '3.99363' |
|||||
| AT2G45780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.163 x 10-3 | 1 | 11 | 8.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45780 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.422 x 10-2 | 11 | 1 | 91.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G45780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.47527 x 10-1 | 8 | 0 | 9 | 3 | 100.00% | 25.00% | 8 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.768813' Avg. expression score for this sample: '87.3506' Avg. expression score in LCM sample: '238.341' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G45770 | CPFTSY | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 2 | 0 | 5 | 60.00% | 100.00% | 5 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.15827' Avg. expression score for this sample: '36.3265' Avg. expression score in LCM sample: '22.6642' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G45770 | CPFTSY | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.23052 x 10-1 | 14 | 2 | 87.50% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45770 | CPFTSY | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.80436 x 10-1 | 16 | 1 | 94.12% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45770 | CPFTSY | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.6889 x 10-1 | 9 | 7 | 4 | 32 | 56.25% | 88.89% | 16 | 36 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.15827' Avg. expression score for this sample: '54.4441' Avg. expression score in LCM sample: '22.6642' Tissue used: 'full endosperm' |