| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM5G863550 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.1343 x 10-3 | 181 | 57 | 93 | 91 | 76.05% | 49.46% | 238 | 184 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0021343' χ2 p-value for Mo17 x B73: '7.34e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G863550 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.6703 x 10-3 | 146 | 97 | 117 | 61 | 60.08% | 34.27% | 243 | 178 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0016703' χ2 p-value for Mo17 x B73: '.000027' Biased in favor of strain: 'B73' |
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| GRMZM5G863152 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.385918 x 10-1 | 22 | 8 | 23 | 35 | 73.33% | 60.34% | 30 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4385918' χ2 p-value for Mo17 x B73: '.3071006' Biased in favor of strain: '' |
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| GRMZM5G863152 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 34 | 34 | 47 | 27 | 50.00% | 36.49% | 68 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0200745' Biased in favor of strain: '' |
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| GRMZM5G863105 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G863105 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 1 | 0 | 100.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G862959 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 6 | 0 | 66.67% | 0.00% | 3 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM5G862959 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.98602 x 10-2 | 18 | 7 | 18 | 8 | 72.00% | 30.77% | 25 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0278069' χ2 p-value for Mo17 x B73: '.0498602' Biased in favor of strain: 'B73' |
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| GRMZM5G862956 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 9 | 8 | 100.00% | 47.06% | 6 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.0863478' Biased in favor of strain: '' |
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| GRMZM5G862956 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.967056 x 10-1 | 10 | 5 | 9 | 2 | 66.67% | 18.18% | 15 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1967056' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: '' |
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| GRMZM5G862936 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.797125 x 10-1 | 15 | 6 | 13 | 7 | 71.43% | 35.00% | 21 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0495346' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: '' |
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| GRMZM5G862936 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 2 | 2 | 3 | 71.43% | 60.00% | 7 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: '' |
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| GRMZM5G862931 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.3183 x 10-3 | 407 | 120 | 179 | 270 | 77.23% | 60.13% | 527 | 449 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.69e-07' χ2 p-value for Mo17 x B73: '.0033183' Biased in favor of strain: 'B73' |
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| GRMZM5G862931 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.983462 x 10-1 | 256 | 175 | 194 | 189 | 59.40% | 49.35% | 431 | 383 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000955' χ2 p-value for Mo17 x B73: '.7983462' Biased in favor of strain: '' |
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| GRMZM5G862882 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.62485 x 10-2 | 96 | 29 | 55 | 59 | 76.80% | 51.75% | 125 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0162485' χ2 p-value for Mo17 x B73: '.0007313' Biased in favor of strain: '' |
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| GRMZM5G862882 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.478 x 10-4 | 63 | 27 | 109 | 20 | 70.00% | 15.50% | 90 | 129 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001478' χ2 p-value for Mo17 x B73: '4.65e-15' Biased in favor of strain: 'B73' |
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| GRMZM5G862817 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.077504 x 10-1 | 501 | 420 | 436 | 425 | 54.40% | 49.36% | 921 | 861 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0076068' χ2 p-value for Mo17 x B73: '.7077504' Biased in favor of strain: '' |
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| GRMZM5G862817 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.1058 x 10-2 | 200 | 76 | 162 | 179 | 72.46% | 52.49% | 276 | 341 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.041058' χ2 p-value for Mo17 x B73: '2.82e-08' Biased in favor of strain: '' |
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| GRMZM5G862799 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.023433 x 10-1 | 42 | 52 | 40 | 25 | 44.68% | 38.46% | 94 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3023433' χ2 p-value for Mo17 x B73: '.0628119' Biased in favor of strain: '' |
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| GRMZM5G862799 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.86 x 10-6 | 8 | 33 | 10 | 82 | 19.51% | 89.13% | 41 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.50e-10' χ2 p-value for Mo17 x B73: '4.86e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM5G862540 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.598578 x 10-1 | 156 | 70 | 132 | 269 | 69.03% | 67.08% | 226 | 401 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4517456' χ2 p-value for Mo17 x B73: '.8598578' Biased in favor of strain: '' |
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| GRMZM5G862540 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.08 x 10-11 | 849 | 437 | 633 | 416 | 66.02% | 39.66% | 1286 | 1049 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.50e-30' χ2 p-value for Mo17 x B73: '2.08e-11' Biased in favor of strain: 'B73' |
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| GRMZM5G862488 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.31 x 10-6 | 205 | 44 | 129 | 147 | 82.33% | 53.26% | 249 | 276 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.58e-07' χ2 p-value for Mo17 x B73: '2.31e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G862488 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.2984 x 10-3 | 221 | 123 | 204 | 144 | 64.24% | 41.38% | 344 | 348 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.27e-07' χ2 p-value for Mo17 x B73: '.0012984' Biased in favor of strain: 'B73' |
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| GRMZM5G862467 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.95551 x 10-2 | 49 | 6 | 5 | 12 | 89.09% | 70.59% | 55 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.71e-09' χ2 p-value for Mo17 x B73: '.0895551' Biased in favor of strain: '' |
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| GRMZM5G862467 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.594582 x 10-1 | 129 | 65 | 186 | 142 | 66.49% | 43.29% | 194 | 328 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9594582' χ2 p-value for Mo17 x B73: '2.71e-19' Biased in favor of strain: '' |
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| GRMZM5G862355 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 3 | 11 | 10 | 62.50% | 47.62% | 8 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.8272594' Biased in favor of strain: '' |
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| GRMZM5G862355 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.904392 x 10-1 | 32 | 10 | 71 | 79 | 76.19% | 52.67% | 42 | 150 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1904392' χ2 p-value for Mo17 x B73: '.0002755' Biased in favor of strain: '' |
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| GRMZM5G862317 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.083652 x 10-1 | 8 | 9 | 4 | 11 | 47.06% | 73.33% | 17 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8083652' χ2 p-value for Mo17 x B73: '.0707011' Biased in favor of strain: '' |
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| GRMZM5G862317 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.831084 x 10-1 | 19 | 8 | 11 | 27 | 70.37% | 71.05% | 27 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6831084' χ2 p-value for Mo17 x B73: '.5662798' Biased in favor of strain: '' |
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| GRMZM5G862219 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.2093 x 10-3 | 395 | 323 | 408 | 493 | 55.01% | 54.72% | 718 | 901 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0072093' χ2 p-value for Mo17 x B73: '.0046293' Biased in favor of strain: '' |
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| GRMZM5G862219 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.213215 x 10-1 | 72 | 48 | 53 | 27 | 60.00% | 33.75% | 120 | 80 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1213215' χ2 p-value for Mo17 x B73: '4.22e-10' Biased in favor of strain: '' |
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| GRMZM5G862131 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.78 x 10-14 | 865 | 416 | 601 | 363 | 67.53% | 37.66% | 1281 | 964 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.23e-36' χ2 p-value for Mo17 x B73: '1.78e-14' Biased in favor of strain: 'B73' |
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| GRMZM5G862131 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.97 x 10-14 | 991 | 306 | 585 | 588 | 76.41% | 50.13% | 1297 | 1173 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.97e-14' χ2 p-value for Mo17 x B73: '2.93e-33' Biased in favor of strain: 'B73' |
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| GRMZM5G862109 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G862109 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 2 | 50.00% | 100.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G862107 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.867711 x 10-1 | 294 | 143 | 198 | 321 | 67.28% | 61.85% | 437 | 519 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7867711' χ2 p-value for Mo17 x B73: '.0199178' Biased in favor of strain: '' |
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| GRMZM5G862107 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.38578 x 10-1 | 138 | 75 | 72 | 63 | 64.79% | 46.67% | 213 | 135 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000158' χ2 p-value for Mo17 x B73: '.438578' Biased in favor of strain: '' |
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| GRMZM5G862101 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.53 x 10-17 | 99 | 10 | 111 | 3 | 90.83% | 2.63% | 109 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.53e-17' χ2 p-value for Mo17 x B73: '4.73e-24' Biased in favor of strain: 'B73' |
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| GRMZM5G862101 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.04 x 10-5 | 80 | 6 | 21 | 9 | 93.02% | 30.00% | 86 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.16e-07' χ2 p-value for Mo17 x B73: '.0000204' Biased in favor of strain: 'B73' |
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| GRMZM5G862071 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.069054 x 10-1 | 122 | 90 | 71 | 65 | 57.55% | 47.79% | 212 | 136 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0279656' χ2 p-value for Mo17 x B73: '.6069054' Biased in favor of strain: '' |
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| GRMZM5G862071 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.17 x 10-4 | 266 | 71 | 139 | 184 | 78.93% | 56.97% | 337 | 323 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.79e-06' χ2 p-value for Mo17 x B73: '.000217' Biased in favor of strain: 'B73' |
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| GRMZM5G861997 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 11 | 3 | 6 | 47.62% | 66.67% | 21 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8272594' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G861997 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 11 | 14 | 33.33% | 56.00% | 3 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.2578989' Biased in favor of strain: '' |
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| GRMZM5G861800 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999712 x 10-1 | 26 | 13 | 26 | 14 | 66.67% | 35.00% | 39 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999712' χ2 p-value for Mo17 x B73: '.0000215' Biased in favor of strain: '' |
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| GRMZM5G861800 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 16 | 0 | 1 | 5 | 100.00% | 83.33% | 16 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM5G861756 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.164124 x 10-1 | 35 | 8 | 5 | 14 | 81.40% | 73.68% | 43 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0404818' χ2 p-value for Mo17 x B73: '.5164124' Biased in favor of strain: '' |
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| GRMZM5G861756 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.710934 x 10-1 | 12 | 8 | 5 | 9 | 60.00% | 64.29% | 20 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3710934' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: '' |
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| GRMZM5G861603 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 0 | 1 | 25.00% | 100.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G861603 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G861451 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 12076 | 6003 | 10310 | 5855 | 66.80% | 36.22% | 18079 | 16165 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G861451 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 11050 | 3101 | 5253 | 6007 | 78.09% | 53.35% | 14151 | 11260 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G861357 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 3 | 60.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM5G861357 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 7 | 7 | 100.00% | 50.00% | 5 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.1858767' Biased in favor of strain: '' |
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| GRMZM5G861300 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 0 | 7 | 25.00% | 100.00% | 4 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM5G861300 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G861269 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 788 | 254 | 758 | 228 | 75.62% | 23.12% | 1042 | 986 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G861269 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 894 | 175 | 409 | 213 | 83.63% | 34.24% | 1069 | 622 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.91e-32' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G861093 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 3 | 4 | 40.00% | 57.14% | 5 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM5G861093 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G861064 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.384307 x 10-1 | 245 | 118 | 151 | 256 | 67.49% | 62.90% | 363 | 407 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7384307' χ2 p-value for Mo17 x B73: '.1068966' Biased in favor of strain: '' |
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| GRMZM5G861064 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.7412 x 10-1 | 248 | 225 | 238 | 219 | 52.43% | 47.92% | 473 | 457 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2902647' χ2 p-value for Mo17 x B73: '.37412' Biased in favor of strain: '' |
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| GRMZM5G860976 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G860976 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 1 | 8 | 1 | 90.00% | 11.11% | 10 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.011412' χ2 p-value for Mo17 x B73: '.0196307' Biased in favor of strain: '' |
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| GRMZM5G860938 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.48 x 10-10 | 597 | 330 | 451 | 278 | 64.40% | 38.13% | 927 | 729 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.80e-18' χ2 p-value for Mo17 x B73: '1.48e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G860938 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.17 x 10-5 | 420 | 139 | 222 | 213 | 75.13% | 48.97% | 559 | 435 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000217' χ2 p-value for Mo17 x B73: '4.82e-15' Biased in favor of strain: 'B73' |
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| GRMZM5G860810 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 x 10-18 | 1135 | 694 | 1276 | 867 | 62.06% | 40.46% | 1829 | 2143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.24e-25' χ2 p-value for Mo17 x B73: '1.00e-18' Biased in favor of strain: 'B73' |
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| GRMZM5G860810 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.63809 x 10-2 | 82 | 65 | 38 | 105 | 55.78% | 73.43% | 147 | 143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0051184' χ2 p-value for Mo17 x B73: '.0863809' Biased in favor of strain: '' |
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| GRMZM5G860761 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.76 x 10-5 | 8 | 39 | 51 | 195 | 17.02% | 79.27% | 47 | 246 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.20e-13' χ2 p-value for Mo17 x B73: '.0000276' Biased in favor of strain: 'Mo17' |
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| GRMZM5G860761 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.774686 x 10-1 | 17 | 7 | 13 | 16 | 70.83% | 55.17% | 24 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0412268' χ2 p-value for Mo17 x B73: '.5774686' Biased in favor of strain: '' |
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| GRMZM5G860590 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 1 | 100.00% | 100.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM5G860590 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G860498 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.067604 x 10-1 | 602 | 312 | 409 | 771 | 65.86% | 65.34% | 914 | 1180 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6067604' χ2 p-value for Mo17 x B73: '.3333034' Biased in favor of strain: '' |
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| GRMZM5G860498 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.523457 x 10-1 | 625 | 569 | 559 | 561 | 52.35% | 50.09% | 1194 | 1120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1050954' χ2 p-value for Mo17 x B73: '.9523457' Biased in favor of strain: '' |
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| GRMZM5G860469 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.70999 x 10-2 | 159 | 94 | 54 | 74 | 62.85% | 57.81% | 253 | 128 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000438' χ2 p-value for Mo17 x B73: '.0770999' Biased in favor of strain: '' |
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| GRMZM5G860469 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.79 x 10-15 | 141 | 3 | 47 | 3 | 97.92% | 6.00% | 144 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.79e-15' χ2 p-value for Mo17 x B73: '9.03e-20' Biased in favor of strain: 'B73' |
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| GRMZM5G860302 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 9 | 10 | 0.00% | 52.63% | 2 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.1943658' Biased in favor of strain: '' |
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| GRMZM5G860302 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.1 x 10-6 | 0 | 30 | 5 | 35 | 0.00% | 87.50% | 30 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.32e-08' χ2 p-value for Mo17 x B73: '2.10e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM5G860226 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.87065 x 10-2 | 41 | 12 | 16 | 61 | 77.36% | 79.22% | 53 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0987065' χ2 p-value for Mo17 x B73: '.0194451' Biased in favor of strain: '' |
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| GRMZM5G860226 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 116 | 78 | 101 | 101 | 59.79% | 50.00% | 194 | 202 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0063673' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM5G860214 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G860214 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM5G860137 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 989 | 479 | 1165 | 616 | 67.37% | 34.59% | 1468 | 1781 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.09e-38' Biased in favor of strain: 'B73' |
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| GRMZM5G860137 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.17615 x 10-2 | 497 | 462 | 452 | 779 | 51.82% | 63.28% | 959 | 1231 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.84e-22' χ2 p-value for Mo17 x B73: '.0117615' Biased in favor of strain: '' |
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| GRMZM5G860072 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.6419 x 10-3 | 34 | 15 | 47 | 24 | 69.39% | 33.80% | 49 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0066419' χ2 p-value for Mo17 x B73: '.0063412' Biased in favor of strain: 'B73' |
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| GRMZM5G860072 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 4 | 100.00% | 66.67% | 1 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM5G859526 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.54 x 10-8 | 70 | 4 | 60 | 12 | 94.59% | 16.67% | 74 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.69e-14' χ2 p-value for Mo17 x B73: '1.54e-08' Biased in favor of strain: 'B73' |
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| GRMZM5G859526 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 5 | 100.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G859316 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.54 x 10-20 | 402 | 61 | 179 | 99 | 86.83% | 35.61% | 463 | 278 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.54e-20' χ2 p-value for Mo17 x B73: '4.56e-28' Biased in favor of strain: 'B73' |
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| GRMZM5G859316 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.1 x 10-14 | 617 | 380 | 767 | 474 | 61.89% | 38.20% | 997 | 1241 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.10e-14' χ2 p-value for Mo17 x B73: '9.00e-17' Biased in favor of strain: 'B73' |
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| GRMZM5G859195 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.158656 x 10-1 | 67 | 29 | 45 | 34 | 69.79% | 43.04% | 96 | 79 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001052' χ2 p-value for Mo17 x B73: '.2158656' Biased in favor of strain: '' |
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| GRMZM5G859195 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.7825 x 10-2 | 62 | 14 | 14 | 15 | 81.58% | 51.72% | 76 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0058204' χ2 p-value for Mo17 x B73: '.087825' Biased in favor of strain: '' |
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| GRMZM5G859107 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.07875 x 10-2 | 0 | 11 | 0 | 13 | 0.00% | 100.00% | 11 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.73e-06' χ2 p-value for Mo17 x B73: '.0107875' Biased in favor of strain: '' |
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| GRMZM5G859107 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.8 x 10-8 | 1 | 32 | 0 | 51 | 3.03% | 100.00% | 33 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.80e-08' χ2 p-value for Mo17 x B73: '9.24e-13' Biased in favor of strain: 'Mo17' |
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| GRMZM5G858887 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.711473 x 10-1 | 13 | 6 | 9 | 22 | 68.42% | 70.97% | 19 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8711473' χ2 p-value for Mo17 x B73: '.6114532' Biased in favor of strain: '' |
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| GRMZM5G858887 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.98 x 10-8 | 968 | 739 | 1392 | 971 | 56.71% | 41.09% | 1707 | 2363 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.98e-08' χ2 p-value for Mo17 x B73: '4.69e-18' Biased in favor of strain: 'B73' |
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| GRMZM5G858880 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.727865 x 10-1 | 196 | 85 | 100 | 168 | 69.75% | 62.69% | 281 | 268 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2727865' χ2 p-value for Mo17 x B73: '.1669133' Biased in favor of strain: '' |
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| GRMZM5G858880 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.1094 x 10-3 | 205 | 154 | 238 | 139 | 57.10% | 36.87% | 359 | 377 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0071094' χ2 p-value for Mo17 x B73: '3.42e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G858653 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 9 | 100.00% | 100.00% | 1 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM5G858653 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 0 | 21 | 100.00% | 100.00% | 6 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.0011937' Biased in favor of strain: '' |