Displaying data sets 901 - 1000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G66340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G66340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G66340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G66340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 67 1 98.53% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.10526 x 10-1 4 0 0 6 100.00% 100.00% 4 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001823'
Avg. expression score for this sample: '26.7564'
Avg. expression score in LCM sample: '1.89603'
Tissue used: 'pure endosperm, no chalazal'
AT5G66330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9062 x 10-2 6 0 0 12 100.00% 100.00% 6 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001823'
Avg. expression score for this sample: '36.4178'
Avg. expression score in LCM sample: '1.89603'
Tissue used: 'full endosperm'
AT5G66330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.49917 x 10-1 4 2 1 3 66.67% 75.00% 6 4 TAIR8 Avg. embryo expression (dissected): '48.951'
Avg. embryo expression (LCM): '15.3591'
AT5G66330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 29 0 100.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66320 GATA5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.266 x 10-3 66 10 86.84% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66320 GATA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 37 14 20 35 72.55% 63.64% 51 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.05845'
Avg. expression score for this sample: '34.3528'
Avg. expression score in LCM sample: '45.3431'
Tissue used: 'pure endosperm, no chalazal'
AT5G66320 GATA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3733 x 10-2 90 30 48 141 75.00% 74.60% 120 189 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.05845'
Avg. expression score for this sample: '52.1534'
Avg. expression score in LCM sample: '45.3431'
Tissue used: 'full endosperm'
AT5G66320 GATA5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 12 6 11 5 66.67% 31.25% 18 16 TAIR8 Avg. embryo expression (dissected): '21.6588'
Avg. embryo expression (LCM): '20.2193'
AT5G66320 GATA5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.08619 x 10-1 18 3 85.71% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66320 GATA5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1848 x 10-2 58 9 86.57% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.5 x 10-8 177 9 95.16% 186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.126 x 10-3 39 5 4 29 88.64% 87.88% 44 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015284'
Avg. expression score for this sample: '44.0993'
Avg. expression score in LCM sample: '5.52642'
Tissue used: 'pure endosperm, no chalazal'
AT5G66310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.44042 x 10-1 78 24 23 40 76.47% 63.49% 102 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015284'
Avg. expression score for this sample: '94.7194'
Avg. expression score in LCM sample: '5.52642'
Tissue used: 'full endosperm'
AT5G66310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 85 62 42 18 57.82% 30.00% 147 60 TAIR8 Avg. embryo expression (dissected): '172.924'
Avg. embryo expression (LCM): '118.679'
AT5G66310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 34 10 77.27% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.6 x 10-11 116 0 100.00% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66300 NAC105 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66300 NAC105 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.30935'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G66300 NAC105 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.296218'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G66300 NAC105 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.6805'
Avg. embryo expression (LCM): '13.8898'
AT5G66300 NAC105 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66300 NAC105 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.1337'
Avg. expression score in LCM sample: '10.2591'
Tissue used: 'pure endosperm, no chalazal'
AT5G66290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '29.3199'
Avg. expression score in LCM sample: '10.2591'
Tissue used: 'full endosperm'
AT5G66290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '26.7092'
Avg. embryo expression (LCM): '45.3239'
AT5G66290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66280 GMD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.422 x 10-3 32 1 96.97% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66280 GMD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.53677 x 10-1 12 8 9 14 60.00% 60.87% 20 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.651691'
Avg. expression score for this sample: '50.6061'
Avg. expression score in LCM sample: '21.2826'
Tissue used: 'pure endosperm, no chalazal'
AT5G66280 GMD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.60405 x 10-1 35 7 6 12 83.33% 66.67% 42 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.651691'
Avg. expression score for this sample: '27.8078'
Avg. expression score in LCM sample: '21.2826'
Tissue used: 'full endosperm'
AT5G66280 GMD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 17 17 2 2 50.00% 50.00% 34 4 TAIR8 Avg. embryo expression (dissected): '48.1624'
Avg. embryo expression (LCM): '14.2414'
AT5G66280 GMD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9 x 10-5 0 9 0.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66280 GMD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.3741 x 10-2 29 23 55.77% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.73 x 10-4 13 28 31.71% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.20524 x 10-1 55 42 15 29 56.70% 65.91% 97 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060594'
Avg. expression score for this sample: '55.4894'
Avg. expression score in LCM sample: '6.39359'
Tissue used: 'pure endosperm, no chalazal'
AT5G66270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5734 x 10-1 52 48 37 74 52.00% 66.67% 100 111 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060594'
Avg. expression score for this sample: '55.7802'
Avg. expression score in LCM sample: '6.39359'
Tissue used: 'full endosperm'
AT5G66270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.65124 x 10-1 39 53 14 13 42.39% 48.15% 92 27 TAIR8 Avg. embryo expression (dissected): '70.1712'
Avg. embryo expression (LCM): '55.3708'
AT5G66270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.19781 x 10-1 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6229 x 10-2 24 5 82.76% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G66260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.1 0 0 0 8 100.00% 0 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.1'
Avg. expression score for this sample: '7.85167'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G66260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.974231'
Avg. embryo expression (LCM): '0'
AT5G66260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8188 x 10-2 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.32547 x 10-1 11 0 5 10 100.00% 66.67% 11 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087824'
Avg. expression score for this sample: '13.2076'
Avg. expression score in LCM sample: '13.8454'
Tissue used: 'pure endosperm, no chalazal'
AT5G66250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5827 x 10-1 27 7 6 22 79.41% 78.57% 34 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087824'
Avg. expression score for this sample: '26.3909'
Avg. expression score in LCM sample: '13.8454'
Tissue used: 'full endosperm'
AT5G66250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 9 1 3 35.71% 75.00% 14 4 TAIR8 Avg. embryo expression (dissected): '13.9185'
Avg. embryo expression (LCM): '16.7531'
AT5G66250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.45009 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.93258 x 10-1 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1075 x 10-2 25 2 92.59% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.77617 x 10-1 5 1 2 6 83.33% 75.00% 6 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.63191'
Avg. expression score for this sample: '437.306'
Avg. expression score in LCM sample: '196.423'
Tissue used: 'pure endosperm, no chalazal'
AT5G66240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 11 4 4 8 73.33% 66.67% 15 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.63191'
Avg. expression score for this sample: '498.912'
Avg. expression score in LCM sample: '196.423'
Tissue used: 'full endosperm'
AT5G66240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 3 0 0 40.00% 5 0 TAIR8 Avg. embryo expression (dissected): '505.796'
Avg. embryo expression (LCM): '497.659'
AT5G66240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3357 x 10-2 1 5 16.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 4 76.47% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.51186 x 10-1 39 17 69.64% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.71226 x 10-1 95 60 23 58 61.29% 71.60% 155 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.710919'
Avg. expression score for this sample: '217.836'
Avg. expression score in LCM sample: '320.032'
Tissue used: 'pure endosperm, no chalazal'
AT5G66230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.0844 x 10-1 23 21 37 88 52.27% 70.40% 44 125 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.710919'
Avg. expression score for this sample: '125.166'
Avg. expression score in LCM sample: '320.032'
Tissue used: 'full endosperm'
AT5G66230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.56245 x 10-1 166 210 35 50 44.15% 58.82% 376 85 TAIR8 Avg. embryo expression (dissected): '813.962'
Avg. embryo expression (LCM): '621.486'
AT5G66230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.56171 x 10-1 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.552 x 10-3 43 8 84.31% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.376453'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G66220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G66220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G66220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.2 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66211 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G66211 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G66211 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G66211 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66211 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66211 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66210 CPK28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.26 x 10-4 186 11 43 29 94.42% 40.28% 197 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-23'
Avg. expression score for this sample: '126.269'
Avg. expression score in LCM sample: '26.7943'
Tissue used: 'pure endosperm, no chalazal'
AT5G66210 CPK28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4 x 10-20 817 61 201 362 93.05% 64.30% 878 563 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-23'
Avg. expression score for this sample: '346.95'
Avg. expression score in LCM sample: '26.7943'
Tissue used: 'full endosperm'
AT5G66210 CPK28 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.0 x 10-7 195 51 29 7 79.27% 19.44% 246 36 TAIR8 Avg. embryo expression (dissected): '159.116'
Avg. embryo expression (LCM): '59.3016'
AT5G66210 CPK28 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.8 x 10-5 27 21 56.25% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66210 CPK28 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.25929 x 10-1 123 26 82.55% 149 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66210 CPK28 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-26 586 17 97.18% 603 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66200 ARO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.40405 x 10-1 8 0 2 2 100.00% 50.00% 8 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.355036'
Avg. expression score for this sample: '102.407'
Avg. expression score in LCM sample: '57.8657'
Tissue used: 'pure endosperm, no chalazal'
AT5G66200 ARO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.85082 x 10-1 7 1 2 6 87.50% 75.00% 8 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.355036'
Avg. expression score for this sample: '86.6496'
Avg. expression score in LCM sample: '57.8657'
Tissue used: 'full endosperm'
AT5G66200 ARO2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 5 1 0 44.44% 0.00% 9 1 TAIR8 Avg. embryo expression (dissected): '110.261'
Avg. embryo expression (LCM): '77.0971'
AT5G66200 ARO2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.8832 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66200 ARO2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.56433 x 10-1 11 5 68.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66200 ARO2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.59577 x 10-1 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66190 FNR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.79251 x 10-1 84 75 39 127 52.83% 76.51% 159 166 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.402801'
Avg. expression score for this sample: '2362.58'
Avg. expression score in LCM sample: '533.049'
Tissue used: 'pure endosperm, no chalazal'
AT5G66190 FNR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.99767 x 10-1 174 108 65 139 61.70% 68.14% 282 204 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.402801'
Avg. expression score for this sample: '1964.2'
Avg. expression score in LCM sample: '533.049'
Tissue used: 'full endosperm'
AT5G66190 FNR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.06288 x 10-1 97 128 26 39 43.11% 60.00% 225 65 TAIR8 Avg. embryo expression (dissected): '3235.9'
Avg. embryo expression (LCM): '1435.03'
AT5G66190 FNR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.288 x 10-2 41 12 77.36% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'