| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G17410 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | paternally biased | not imprinted | 2.09 x 10-7 | 9.106 | 0 | 39 | 27 | 78 | 0.00% | 74.29% | 39 | 105 | 18.999 | 5.05 x 10-17 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |
| AT4G17410 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 14 | 0 | 172 | 0 | 100.00% | 0.00% | 14 | 172 | 163.179 | 5.89 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | ||
| AT4G17390 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.958 | 12 | 6 | 10 | 15 | 66.67% | 60.00% | 18 | 25 | 0.933 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.23 | |||
| AT4G17390 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.661 | 29 | 14 | 113 | 277 | 67.44% | 71.03% | 43 | 390 | 0.739 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.23' | |||
| AT4G17390 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 1.03 x 10-5 | 3.131 | 35 | 24 | 27 | 6 | 59.32% | 18.18% | 59 | 33 | 1.665 | 2.88 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.23' | |
| AT4G17390 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.829 | 3 | 3 | 3 | 3 | 50.00% | 50.00% | 6 | 6 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.23' | |||
| AT4G17390 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.23' | |||||
| AT4G17390 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.23' | |||||
| AT4G17390 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.0805 | 227 | 142 | 192 | 355 | 61.52% | 64.90% | 369 | 547 | 0.5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.23' | |||
| AT4G17390 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.23' | |||||
| AT4G17390 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.23' | |||||
| AT4G17380 | MSH4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 1 | 4 | 80.00% | 0 | 5 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 0 | |||
| AT4G17380 | MSH4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 3 | 9 | 75.00% | 0 | 12 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '0' | |||
| AT4G17380 | MSH4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '0' | ||||
| AT4G17380 | MSH4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.393 | 5 | 0 | 0 | 1 | 100.00% | 100.00% | 5 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '0' | ||
| AT4G17380 | MSH4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '0' | ||||
| AT4G17380 | MSH4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 8 | 0 | 0 | 0.00% | 8 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '0' | |||
| AT4G17380 | MSH4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 1 | 0 | 3 | 7 | 100.00% | 70.00% | 1 | 10 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '0' | ||
| AT4G17380 | MSH4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 14 | 0 | 0.00% | 0 | 14 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '0' | |||
| AT4G17380 | MSH4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '0' | ||||
| AT4G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0218 | 0.0 | 66 | 14 | 52 | 101 | 82.50% | 66.01% | 80 | 153 | 0.0 | 0.0262 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.06 | |
| AT4G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.993 | 53 | 24 | 67 | 130 | 68.83% | 65.99% | 77 | 197 | 0.806 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |||
| AT4G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.51 x 10-26 | 14.17 | 87 | 0 | 29 | 109 | 100.00% | 78.99% | 87 | 138 | 4.012 | 4.89 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |
| AT4G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.894 | 64 | 22 | 9 | 16 | 74.42% | 64.00% | 86 | 25 | 0.56 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |||
| AT4G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 4 | 0 | 21 | 0 | 100.00% | 0.00% | 4 | 21 | 5.692 | 1.48 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | ||
| AT4G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | ||||
| AT4G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.294 | 64 | 27 | 29 | 75 | 70.33% | 72.12% | 91 | 104 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |||
| AT4G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.03 x 10-6 | 1.711 | 142 | 9 | 58 | 69 | 94.04% | 54.33% | 151 | 127 | 4.835 | 1.63 x 10-14 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |
| AT4G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.115 | 194 | 23 | 55 | 44 | 89.40% | 44.44% | 217 | 99 | 4.631 | 1.63 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | ||
| AT4G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 1 | 0 | 1 | 3 | 100.00% | 75.00% | 1 | 4 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .05 | |||
| AT4G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 0.0953 | 3 | 0 | 1 | 8 | 100.00% | 88.89% | 3 | 9 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |||
| AT4G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |||||
| AT4G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.739 | 4 | 2 | 2 | 0 | 66.67% | 0.00% | 6 | 2 | 0.672 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |||
| AT4G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |||||
| AT4G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |||||
| AT4G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.369 | 2 | 2 | 4 | 1 | 50.00% | 20.00% | 4 | 5 | 0.702 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |||
| AT4G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 17 | 0 | 0 | 0.00% | 17 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | ||||
| AT4G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |||||
| AT4G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.105 | 10 | 3 | 0 | 5 | 76.92% | 100.00% | 13 | 5 | 0.714 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.64 | |||
| AT4G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 0.0779 | 6 | 0 | 0 | 2 | 100.00% | 100.00% | 6 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.64' | |||
| AT4G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.64' | |||||
| AT4G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.393 | 5 | 0 | 0 | 1 | 100.00% | 100.00% | 5 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.64' | |||
| AT4G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 12 | 0 | 0 | 0 | 100.00% | 12 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.64' | ||||
| AT4G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.64' | |||||
| AT4G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.64' | ||||
| AT4G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.64' | |||||
| AT4G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.64' | |||||
| AT4G17340 | TIP2;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 104.004 | 246 | 4 | 3 | 156 | 98.40% | 98.11% | 250 | 159 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 4.86 | |
| AT4G17340 | TIP2;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 268.011 | 376 | 0 | 2 | 81 | 100.00% | 97.59% | 376 | 83 | 0.0691 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.86' | |
| AT4G17340 | TIP2;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 177.785 | 555 | 0 | 2 | 37 | 100.00% | 94.87% | 555 | 39 | 2.078 | 6.27 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.86' |
| AT4G17340 | TIP2;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 3.84 x 10-3 | 4.085 | 146 | 0 | 1 | 3 | 100.00% | 75.00% | 146 | 4 | 0.0842 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.86' | |
| AT4G17340 | TIP2;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 31 | 0 | 0 | 0 | 100.00% | 31 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.86' | |||
| AT4G17340 | TIP2;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 49 | 0 | 0 | 0 | 100.00% | 49 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.86' | |||
| AT4G17340 | TIP2;2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 2.16 x 10-25 | 31.092 | 31 | 0 | 1 | 88 | 100.00% | 98.88% | 31 | 89 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.86' | |
| AT4G17340 | TIP2;2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 28 | 100.00% | 0 | 28 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.86' | |||
| AT4G17340 | TIP2;2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 68 | 0 | 0.00% | 0 | 68 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.86' | |||
| AT4G17330 | G2484-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.801 | 298 | 128 | 293 | 469 | 69.95% | 61.55% | 426 | 762 | 1.022 | 0.0116 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.64 | |
| AT4G17330 | G2484-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.445 | 729 | 329 | 884 | 1722 | 68.90% | 66.08% | 1058 | 2606 | 0.183 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | ||
| AT4G17330 | G2484-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 0.0 | 2.218 | 983 | 246 | 580 | 1628 | 79.98% | 73.73% | 1229 | 2208 | 1.126 | 6.8 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' |
| AT4G17330 | G2484-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.317 | 1078 | 515 | 303 | 658 | 67.67% | 68.47% | 1593 | 961 | 0.921 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | ||
| AT4G17330 | G2484-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.124 | 845 | 258 | 401 | 415 | 76.61% | 50.86% | 1103 | 816 | 2.4 | 1.0 x 10-30 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | |
| AT4G17330 | G2484-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 4.42 x 10-5 | 1.147 | 565 | 371 | 393 | 698 | 60.36% | 63.98% | 936 | 1091 | 0.136 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | |
| AT4G17330 | G2484-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.15 x 10-3 | 1.031 | 1306 | 549 | 1252 | 2566 | 70.40% | 67.21% | 1855 | 3818 | 0.0 | 0.0416 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' |
| AT4G17330 | G2484-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.573 | 781 | 446 | 510 | 1104 | 63.65% | 68.40% | 1227 | 1614 | 0.0 | 0.0127 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | |
| AT4G17330 | G2484-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 7.98 x 10-28 | 1.951 | 1523 | 394 | 1134 | 484 | 79.45% | 29.91% | 1917 | 1618 | 7.289 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' |
| AT4G17310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.711 | 2 | 1 | 3 | 1 | 66.67% | 25.00% | 3 | 4 | 0.678 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1 | |||
| AT4G17310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 8 | 4 | 33.33% | 0 | 12 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1' | ||||
| AT4G17310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 0 | 6 | 0 | 100.00% | 0.00% | 1 | 6 | 0.178 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1' | |||
| AT4G17310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.443 | 1 | 0 | 0 | 4 | 100.00% | 100.00% | 1 | 4 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1' | |||
| AT4G17310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1' | |||||
| AT4G17310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 7.8 x 10-4 | 0.0 | 8 | 0 | 0 | 6 | 100.00% | 100.00% | 8 | 6 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1' | ||
| AT4G17310 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.476 | 16 | 3 | 5 | 10 | 84.21% | 66.67% | 19 | 15 | 0.595 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1' | |||
| AT4G17310 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1' | |||||
| AT4G17310 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1' | |||||
| AT4G17300 | NS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.44 | 28 | 4 | 27 | 28 | 87.50% | 50.91% | 32 | 55 | 1.465 | 2.02 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.25 | |
| AT4G17300 | NS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.532 | 47 | 10 | 47 | 55 | 82.46% | 53.92% | 57 | 102 | 1.396 | 1.04 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT4G17300 | NS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 17 | 41 | 70.69% | 0 | 58 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |||
| AT4G17300 | NS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 77 | 35 | 31 | 59 | 68.75% | 65.56% | 112 | 90 | 0.886 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | ||
| AT4G17300 | NS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0826 | 41 | 64 | 16 | 52 | 39.05% | 76.47% | 105 | 68 | 1.976 | 2.72 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT4G17300 | NS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.42 x 10-4 | 1.307 | 58 | 7 | 35 | 71 | 89.23% | 66.98% | 65 | 106 | 1.271 | 1.75 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT4G17300 | NS1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.132 | 129 | 43 | 104 | 202 | 75.00% | 66.01% | 172 | 306 | 0.108 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | ||
| AT4G17300 | NS1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 7.42 x 10-8 | 2.558 | 45 | 0 | 33 | 45 | 100.00% | 57.69% | 45 | 78 | 5.502 | 5.15 x 10-8 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT4G17300 | NS1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.846 | 12 | 1 | 72 | 45 | 92.31% | 38.46% | 13 | 117 | 2.212 | 2.76 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT4G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0665 | 31 | 17 | 4 | 28 | 64.58% | 87.50% | 48 | 32 | 0.0873 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .26 | |||
| AT4G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 3.05 x 10-14 | 9.469 | 28 | 0 | 2 | 39 | 100.00% | 95.12% | 28 | 41 | 0.654 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.26' | ||
| AT4G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0207 | 0.0 | 31 | 0 | 6 | 5 | 100.00% | 45.45% | 31 | 11 | 3.14 | 1.56 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.26' | |
| AT4G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 0.0337 | 0.0 | 18 | 1 | 0 | 3 | 94.74% | 100.00% | 19 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.26' | ||
| AT4G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.26' | |||||
| AT4G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.26' | |||||
| AT4G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | MEG | no data | 4.27 x 10-10 | 3.547 | 43 | 4 | 4 | 38 | 91.49% | 90.48% | 47 | 42 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.26' | ||
| AT4G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 39 | 0 | 0 | 0 | 100.00% | 39 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.26' | ||||
| AT4G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 0 | 21 | 0 | 100.00% | 0.00% | 1 | 21 | 0.0538 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.26' | |||
| AT4G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.943 | 93 | 32 | 133 | 171 | 74.40% | 56.25% | 125 | 304 | 1.21 | 1.78 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .08 | ||
| AT4G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.88 x 10-8 | 1.684 | 106 | 73 | 512 | 552 | 59.22% | 51.88% | 179 | 1064 | 0.141 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | ||
| AT4G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.184 | 1249 | 247 | 764 | 534 | 83.49% | 41.14% | 1496 | 1298 | 5.652 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | ||
| AT4G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |||||
| AT4G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |||||
| AT4G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |||||
| AT4G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.56 x 10-9 | 1.404 | 575 | 210 | 742 | 592 | 73.25% | 44.38% | 785 | 1334 | 2.631 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |
| AT4G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.24 x 10-7 | 1.246 | 1630 | 412 | 742 | 482 | 79.82% | 39.38% | 2042 | 1224 | 4.875 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' |