| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G59040 | COPT3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | ||||
| AT5G59040 | COPT3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | ||||
| AT5G59040 | COPT3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | ||||
| AT5G59030 | COPT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.524 | 96 | 28 | 143 | 133 | 77.42% | 48.19% | 124 | 276 | 1.918 | 2.33 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.99 | |
| AT5G59030 | COPT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0246 | 0.0 | 118 | 44 | 147 | 126 | 72.84% | 46.15% | 162 | 273 | 1.748 | 3.5 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.99' |
| AT5G59030 | COPT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 36 | 11 | 23.40% | 0 | 47 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.99' | |||
| AT5G59030 | COPT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.972 | 304 | 90 | 52 | 66 | 77.16% | 55.93% | 394 | 118 | 1.466 | 8.35 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.99' | |
| AT5G59030 | COPT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.247 | 131 | 30 | 59 | 35 | 81.37% | 37.23% | 161 | 94 | 3.277 | 7.97 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.99' | |
| AT5G59030 | COPT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 28 | 0 | 57 | 0 | 100.00% | 0.00% | 28 | 57 | 108.153 | 3.45 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.99' | |
| AT5G59030 | COPT1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.99' | ||||
| AT5G59030 | COPT1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.99' | ||||
| AT5G59030 | COPT1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.99' | ||||
| AT5G59020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 2 | 0 | 9 | 7 | 100.00% | 43.75% | 2 | 16 | 0.663 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.1 | |||
| AT5G59020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 0.749 | 14 | 11 | 13 | 29 | 56.00% | 69.05% | 25 | 42 | 0.437 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||
| AT5G59020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 7 | 0 | 0.00% | 0 | 7 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | ||||
| AT5G59020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.481 | 23 | 8 | 4 | 12 | 74.19% | 75.00% | 31 | 16 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||
| AT5G59020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 5.94 x 10-3 | 0.0 | 16 | 16 | 0 | 20 | 50.00% | 100.00% | 32 | 20 | 2.638 | 1.8 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |
| AT5G59020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.849 | 15 | 3 | 12 | 15 | 83.33% | 55.56% | 18 | 27 | 0.0905 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||
| AT5G59020 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.199 | 60 | 22 | 25 | 65 | 73.17% | 72.22% | 82 | 90 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||
| AT5G59020 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.35 x 10-3 | 0.0 | 26 | 0 | 8 | 8 | 100.00% | 50.00% | 26 | 16 | 2.632 | 2.08 x 10-4 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |
| AT5G59020 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.189 | 38 | 15 | 17 | 47 | 71.70% | 73.44% | 53 | 64 | 0.891 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||
| AT5G59010 | BSK5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.945 | 40 | 16 | 43 | 81 | 71.43% | 65.32% | 56 | 124 | 0.685 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.83 | ||
| AT5G59010 | BSK5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.431 | 94 | 43 | 82 | 187 | 68.61% | 69.52% | 137 | 269 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT5G59010 | BSK5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 7.57 x 10-5 | 5.801 | 0 | 19 | 29 | 64 | 0.00% | 68.82% | 19 | 93 | 7.063 | 2.08 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' |
| AT5G59010 | BSK5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.486 | 272 | 158 | 85 | 161 | 63.26% | 65.45% | 430 | 246 | 0.855 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT5G59010 | BSK5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | PEG | not imprinted | 4.83 x 10-21 | 45.175 | 75 | 77 | 58 | 0 | 49.34% | 0.00% | 152 | 58 | 10.715 | 1.34 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' |
| AT5G59010 | BSK5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0154 | 0.0 | 72 | 30 | 24 | 83 | 70.59% | 77.57% | 102 | 107 | 0.344 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT5G59010 | BSK5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.152 | 95 | 53 | 152 | 236 | 64.19% | 60.82% | 148 | 388 | 0.668 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT5G59010 | BSK5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 8.09 x 10-7 | 2.604 | 14 | 1 | 0 | 17 | 93.33% | 100.00% | 15 | 17 | 0.555 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT5G59010 | BSK5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | PEG | not imprinted | 4.81 x 10-10 | 25.021 | 0 | 18 | 38 | 16 | 0.00% | 29.63% | 18 | 54 | 1.109 | 9.34 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' |
| AT5G59000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.186 | 13 | 2 | 11 | 27 | 86.67% | 71.05% | 15 | 38 | 0.487 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .24 | |||
| AT5G59000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0998 | 51 | 10 | 12 | 24 | 83.61% | 66.67% | 61 | 36 | 0.146 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |||
| AT5G59000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 12 | 12 | 50.00% | 0 | 24 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||||
| AT5G59000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 64 | 51 | 11 | 36 | 55.65% | 76.60% | 115 | 47 | 0.0 | 0.0473 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT5G59000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 2.49 x 10-19 | 11.115 | 50 | 13 | 0 | 81 | 79.37% | 100.00% | 63 | 81 | 3.005 | 2.02 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |
| AT5G59000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 74 | 74 | 12 | 50 | 50.00% | 80.65% | 148 | 62 | 1.626 | 6.66 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT5G59000 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.11 | 26 | 4 | 27 | 46 | 86.67% | 63.01% | 30 | 73 | 0.0 | 0.0472 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT5G59000 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0235 | 0.0 | 128 | 21 | 75 | 93 | 85.91% | 55.36% | 149 | 168 | 2.298 | 7.08 x 10-9 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |
| AT5G59000 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 59 | 17 | 52 | 63 | 77.63% | 54.78% | 76 | 115 | 1.167 | 1.67 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT5G58990 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 1 | 4 | 80.00% | 0 | 5 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.12 | ||||
| AT5G58990 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 16 | 25 | 60.98% | 0 | 41 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G58990 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G58990 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.311 | 507 | 242 | 152 | 236 | 67.69% | 60.82% | 749 | 388 | 0.0709 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||
| AT5G58990 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.63 | 402 | 145 | 413 | 558 | 73.49% | 57.47% | 547 | 971 | 1.495 | 9.99 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||
| AT5G58990 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.492 | 536 | 264 | 252 | 540 | 67.00% | 68.18% | 800 | 792 | 0.735 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||
| AT5G58990 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0625 | 339 | 190 | 226 | 658 | 64.08% | 74.43% | 529 | 884 | 1.175 | 1.64 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||
| AT5G58990 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.163 | 495 | 298 | 199 | 563 | 62.42% | 73.88% | 793 | 762 | 1.255 | 2.94 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||
| AT5G58990 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.71 x 10-10 | 1.419 | 576 | 284 | 172 | 656 | 66.98% | 79.23% | 860 | 828 | 1.38 | 2.4 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT5G58980 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.1 | |||||
| AT5G58980 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT5G58980 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT5G58980 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.856 | 800 | 342 | 371 | 605 | 70.05% | 61.99% | 1142 | 976 | 1.111 | 6.16 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | ||
| AT5G58980 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 9.3 x 10-13 | 1.501 | 851 | 181 | 326 | 560 | 82.46% | 63.21% | 1032 | 886 | 2.034 | 9.37 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |
| AT5G58980 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 5.79 x 10-13 | 1.715 | 354 | 240 | 320 | 370 | 59.60% | 53.62% | 594 | 690 | 0.0 | 0.0485 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |
| AT5G58980 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.33 x 10-10 | 1.293 | 819 | 909 | 344 | 2429 | 47.40% | 87.59% | 1728 | 2773 | 6.37 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |
| AT5G58980 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.93 x 10-6 | 1.16 | 829 | 891 | 146 | 952 | 48.20% | 86.70% | 1720 | 1098 | 5.358 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |
| AT5G58980 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.72 x 10-8 | 1.212 | 886 | 884 | 264 | 1597 | 50.06% | 85.81% | 1770 | 1861 | 4.828 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |
| AT5G58970 | UCP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 3.03 | ||||
| AT5G58970 | UCP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.03' | ||||
| AT5G58970 | UCP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.03' | ||||
| AT5G58970 | UCP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 8.99 x 10-9 | 1.962 | 299 | 44 | 36 | 84 | 87.17% | 70.00% | 343 | 120 | 1.442 | 3.9 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.03' |
| AT5G58970 | UCP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.13 x 10-17 | 2.967 | 173 | 34 | 35 | 169 | 83.57% | 82.84% | 207 | 204 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.03' | |
| AT5G58970 | UCP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.11 x 10-28 | 5.692 | 162 | 25 | 20 | 169 | 86.63% | 89.42% | 187 | 189 | 0.524 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.03' | |
| AT5G58970 | UCP2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 3.257 | 311 | 79 | 83 | 444 | 79.74% | 84.25% | 390 | 527 | 0.163 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.03' | |
| AT5G58970 | UCP2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.67 x 10-28 | 16.01 | 71 | 0 | 28 | 145 | 100.00% | 83.82% | 71 | 173 | 2.388 | 7.88 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.03' |
| AT5G58970 | UCP2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.4 x 10-17 | 3.624 | 97 | 67 | 11 | 272 | 59.15% | 96.11% | 164 | 283 | 6.916 | 1.31 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.03' |
| AT5G58960 | GIL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | not imprinted | 0.0492 | 0.0 | 4 | 0 | 2 | 14 | 100.00% | 87.50% | 4 | 16 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .41 | |
| AT5G58960 | GIL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 5.97 x 10-3 | 1.045 | 6 | 0 | 28 | 113 | 100.00% | 80.14% | 6 | 141 | 0.733 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.41' | |
| AT5G58960 | GIL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 6.18 x 10-6 | 7.04 | 0 | 33 | 11 | 27 | 0.00% | 71.05% | 33 | 38 | 10.603 | 1.4 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.41' |
| AT5G58960 | GIL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.721 | 74 | 36 | 20 | 50 | 67.27% | 71.43% | 110 | 70 | 0.858 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.41' | ||
| AT5G58960 | GIL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0615 | 70 | 34 | 28 | 93 | 67.31% | 76.86% | 104 | 121 | 0.174 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.41' | ||
| AT5G58960 | GIL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.797 | 33 | 31 | 11 | 36 | 51.56% | 76.60% | 64 | 47 | 0.0 | 0.016 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.41' | |
| AT5G58960 | GIL1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.377 | 111 | 91 | 57 | 236 | 54.95% | 80.55% | 202 | 293 | 1.93 | 8.64 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.41' | |
| AT5G58960 | GIL1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.94 | 91 | 22 | 30 | 26 | 80.53% | 46.43% | 113 | 56 | 1.79 | 3.0 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.41' | |
| AT5G58960 | GIL1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0443 | 0.0 | 32 | 0 | 28 | 11 | 100.00% | 28.21% | 32 | 39 | 10.699 | 9.05 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.41' |
| AT5G58950 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 17 | 12 | 13 | 42 | 58.62% | 76.36% | 29 | 55 | 0.253 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.47 | |||
| AT5G58950 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.793 | 36 | 20 | 98 | 246 | 64.29% | 71.51% | 56 | 344 | 0.402 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.47' | |||
| AT5G58950 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 8.97 x 10-7 | 1.375 | 216 | 215 | 40 | 366 | 50.12% | 90.15% | 431 | 406 | 5.45 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.47' | |
| AT5G58950 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.475 | 290 | 123 | 49 | 107 | 70.22% | 68.59% | 413 | 156 | 0.974 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.47' | |||
| AT5G58950 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.89 x 10-3 | 1.033 | 214 | 115 | 55 | 206 | 65.05% | 78.93% | 329 | 261 | 1.194 | 4.32 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.47' | |
| AT5G58950 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 78 | 52 | 65 | 169 | 60.00% | 72.22% | 130 | 234 | 0.0 | 0.0301 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.47' | ||
| AT5G58950 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.45 x 10-5 | 1.23 | 298 | 116 | 235 | 647 | 71.98% | 73.36% | 414 | 882 | 0.812 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.47' | ||
| AT5G58950 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 9.0 x 10-30 | 3.101 | 330 | 187 | 47 | 532 | 63.83% | 91.88% | 517 | 579 | 3.984 | 1.0 x 10-29 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.47' | |
| AT5G58950 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0195 | 0.0 | 358 | 125 | 166 | 323 | 74.12% | 66.05% | 483 | 489 | 0.0 | 7.91 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.47' | |
| AT5G58940 | CRCK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.896 | 8 | 2 | 6 | 9 | 80.00% | 60.00% | 10 | 15 | 0.591 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .07 | ||
| AT5G58940 | CRCK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.886 | 18 | 7 | 9 | 12 | 72.00% | 57.14% | 25 | 21 | 0.497 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT5G58940 | CRCK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT5G58940 | CRCK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.854 | 25 | 9 | 8 | 16 | 73.53% | 66.67% | 34 | 24 | 0.984 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT5G58940 | CRCK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.311 | 3 | 0 | 19 | 32 | 100.00% | 62.75% | 3 | 51 | 0.639 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT5G58940 | CRCK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 15 | 100.00% | 0 | 15 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||
| AT5G58940 | CRCK1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.0431 | 0.0 | 13 | 1 | 0 | 3 | 92.86% | 100.00% | 14 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |
| AT5G58940 | CRCK1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT5G58940 | CRCK1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | no data | 0.196 | 32 | 8 | 12 | 1 | 80.00% | 7.69% | 40 | 13 | 3.757 | 7.26 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |
| AT5G58930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 20.196 | 194 | 10 | 19 | 235 | 95.10% | 92.52% | 204 | 254 | 0.516 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 4.08 | ||
| AT5G58930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 12.394 | 727 | 49 | 72 | 412 | 93.69% | 85.12% | 776 | 484 | 1.514 | 5.56 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.08' | |
| AT5G58930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 29.559 | 2244 | 127 | 59 | 616 | 94.64% | 91.26% | 2371 | 675 | 1.085 | 2.88 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.08' | |
| AT5G58930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 9.761 | 718 | 28 | 38 | 121 | 96.25% | 76.10% | 746 | 159 | 3.851 | 2.92 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.08' | |
| AT5G58930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0 | 20.607 | 501 | 36 | 39 | 448 | 93.30% | 91.99% | 537 | 487 | 0.561 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.08' | ||
| AT5G58930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0 | 12.85 | 1024 | 96 | 63 | 486 | 91.43% | 88.52% | 1120 | 549 | 0.0895 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.08' | ||
| AT5G58930 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 3.09 x 10-26 | 5.391 | 140 | 26 | 17 | 169 | 84.34% | 90.86% | 166 | 186 | 0.151 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.08' |