| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G22300 | SOBER1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0975 | 101 | 25 | 66 | 112 | 80.16% | 62.92% | 126 | 178 | 1.139 | 0.005 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .88 | |
| AT4G22300 | SOBER1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0288 | 0.0 | 62 | 12 | 182 | 292 | 83.78% | 61.60% | 74 | 474 | 1.456 | 5.02 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.88' |
| AT4G22300 | SOBER1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.64 x 10-21 | 8.722 | 90 | 0 | 108 | 203 | 100.00% | 65.27% | 90 | 311 | 9.875 | 3.42 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.88' |
| AT4G22300 | SOBER1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.226 | 77 | 57 | 26 | 44 | 57.46% | 62.86% | 134 | 70 | 0.79 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.88' | ||
| AT4G22300 | SOBER1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.43 | 38 | 30 | 2 | 11 | 55.88% | 84.62% | 68 | 13 | 0.0898 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.88' | ||
| AT4G22300 | SOBER1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.28 x 10-3 | 1.054 | 131 | 33 | 113 | 220 | 79.88% | 66.07% | 164 | 333 | 1.113 | 2.95 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.88' |
| AT4G22300 | SOBER1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.773 | 259 | 82 | 144 | 164 | 75.95% | 53.25% | 341 | 308 | 1.731 | 8.58 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.88' | |
| AT4G22300 | SOBER1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 2.91 x 10-10 | 4.052 | 76 | 0 | 23 | 32 | 100.00% | 58.18% | 76 | 55 | 8.373 | 2.51 x 10-10 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.88' |
| AT4G22300 | SOBER1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 142 | 0 | 188 | 0 | 100.00% | 0.00% | 142 | 188 | 1809.064 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.88' | |
| AT4G22290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0472 | 0.0 | 359 | 98 | 278 | 414 | 78.56% | 59.83% | 457 | 692 | 1.691 | 1.79 x 10-10 | TAIR10 | ||
| AT4G22290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.47 x 10-9 | 1.305 | 714 | 160 | 613 | 942 | 81.69% | 60.58% | 874 | 1555 | 2.21 | 9.63 x 10-27 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G22290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.44 x 10-16 | 1.886 | 825 | 86 | 257 | 298 | 90.56% | 53.69% | 911 | 555 | 5.611 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G22290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.14 x 10-7 | 1.374 | 608 | 177 | 143 | 329 | 77.45% | 69.70% | 785 | 472 | 1.038 | 0.0114 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G22290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 0.0 | 43.224 | 339 | 69 | 0 | 175 | 83.09% | 100.00% | 408 | 175 | 7.163 | 2.0 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G22290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.103 | 263 | 50 | 179 | 94 | 84.03% | 34.43% | 313 | 273 | 5.777 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G22290 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | maternally biased | not imprinted | 5.75 x 10-27 | 2.159 | 980 | 170 | 245 | 503 | 85.22% | 67.25% | 1150 | 748 | 2.049 | 6.37 x 10-19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G22290 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.3 x 10-8 | 1.594 | 824 | 134 | 77 | 127 | 86.01% | 62.25% | 958 | 204 | 2.343 | 4.39 x 10-13 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G22290 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.81 x 10-3 | 1.036 | 868 | 54 | 730 | 284 | 94.14% | 28.01% | 922 | 1014 | 27.393 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G22285 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.021 | 0.0 | 80 | 13 | 44 | 69 | 86.02% | 61.06% | 93 | 113 | 1.512 | 3.36 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.83 | |
| AT4G22285 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.33 x 10-5 | 1.335 | 102 | 11 | 113 | 153 | 90.27% | 57.52% | 113 | 266 | 2.913 | 3.98 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT4G22285 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.049 | 0.0 | 72 | 55 | 50 | 88 | 56.69% | 63.77% | 127 | 138 | 0.312 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT4G22285 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 398 | 180 | 100 | 185 | 68.86% | 64.91% | 578 | 285 | 0.47 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |||
| AT4G22285 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.465 | 483 | 27 | 272 | 48 | 94.71% | 15.00% | 510 | 320 | 50.801 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT4G22285 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0226 | 0.0 | 267 | 0 | 129 | 8 | 100.00% | 5.84% | 267 | 137 | 556.694 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT4G22285 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.609 | 207 | 206 | 169 | 752 | 50.12% | 81.65% | 413 | 921 | 3.092 | 1.1 x 10-29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT4G22285 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.125 | 31 | 60 | 22 | 287 | 34.07% | 92.88% | 91 | 309 | 10.68 | 7.1 x 10-29 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT4G22285 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 3.04 x 10-13 | 4.264 | 49 | 84 | 5 | 488 | 36.84% | 98.99% | 133 | 493 | 50.129 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT4G22280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.582 | 7 | 9 | 10 | 29 | 43.75% | 74.36% | 16 | 39 | 0.131 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.61 | |||
| AT4G22280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 7.09 x 10-4 | 1.232 | 18 | 1 | 14 | 41 | 94.74% | 74.55% | 19 | 55 | 0.172 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | ||
| AT4G22280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 2.51 x 10-4 | 4.31 | 0 | 30 | 14 | 57 | 0.00% | 80.28% | 30 | 71 | 17.863 | 1.1 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | |
| AT4G22280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.765 | 59 | 34 | 14 | 42 | 63.44% | 75.00% | 93 | 56 | 0.332 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | |||
| AT4G22280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.223 | 8 | 0 | 26 | 19 | 100.00% | 42.22% | 8 | 45 | 1.59 | 6.69 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | ||
| AT4G22280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.434 | 40 | 24 | 10 | 14 | 62.50% | 58.33% | 64 | 24 | 0.918 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | |||
| AT4G22280 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.775 | 95 | 43 | 58 | 124 | 68.84% | 68.13% | 138 | 182 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | |||
| AT4G22280 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.507 | 104 | 50 | 36 | 56 | 67.53% | 60.87% | 154 | 92 | 0.407 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | |||
| AT4G22280 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.89 x 10-3 | 1.138 | 90 | 109 | 40 | 89 | 45.23% | 68.99% | 199 | 129 | 1.408 | 3.59 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | |
| AT4G22270 | MRB1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.147 | 42 | 11 | 28 | 61 | 79.25% | 68.54% | 53 | 89 | 0.324 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.2 | ||
| AT4G22270 | MRB1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.87 x 10-4 | 1.295 | 63 | 17 | 49 | 160 | 78.75% | 76.56% | 80 | 209 | 0.884 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.2' | |
| AT4G22270 | MRB1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 10 | 54 | 84.38% | 0 | 64 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.2' | |||
| AT4G22270 | MRB1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 47 | 33 | 16 | 44 | 58.75% | 73.33% | 80 | 60 | 0.197 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.2' | ||
| AT4G22270 | MRB1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 3.52 x 10-4 | 1.141 | 38 | 25 | 0 | 19 | 60.32% | 100.00% | 63 | 19 | 1.975 | 7.46 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.2' |
| AT4G22270 | MRB1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 3.18 x 10-3 | 0.0 | 13 | 0 | 11 | 20 | 100.00% | 64.52% | 13 | 31 | 0.0 | 0.0295 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.2' |
| AT4G22270 | MRB1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.442 | 98 | 48 | 81 | 201 | 67.12% | 71.28% | 146 | 282 | 0.551 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.2' | ||
| AT4G22270 | MRB1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.55 x 10-16 | 214.681 | 0 | 24 | 33 | 0 | 0.00% | 0.00% | 24 | 33 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.2' | |
| AT4G22270 | MRB1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 50 | 65 | 16 | 83 | 43.48% | 83.84% | 115 | 99 | 2.754 | 1.27 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.2' | |
| AT4G22265 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT4G22265 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22265 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22265 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22265 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22265 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22265 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22265 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22265 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22260 | IM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.941 | 87 | 44 | 72 | 156 | 66.41% | 68.42% | 131 | 228 | 0.907 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .29 | ||
| AT4G22260 | IM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 9.51 x 10-6 | 1.424 | 116 | 20 | 172 | 325 | 85.29% | 65.39% | 136 | 497 | 1.595 | 2.32 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.29' |
| AT4G22260 | IM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.14 x 10-9 | 3.005 | 91 | 1 | 39 | 45 | 98.91% | 53.57% | 92 | 84 | 9.027 | 7.23 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.29' |
| AT4G22260 | IM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.628 | 479 | 203 | 140 | 209 | 70.23% | 59.89% | 682 | 349 | 1.083 | 4.87 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.29' | |
| AT4G22260 | IM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.287 | 252 | 40 | 96 | 79 | 86.30% | 45.14% | 292 | 175 | 4.083 | 3.64 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.29' | |
| AT4G22260 | IM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.248 | 92 | 38 | 67 | 80 | 70.77% | 54.42% | 130 | 147 | 1.008 | 0.0105 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.29' | |
| AT4G22260 | IM | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 8.62 x 10-4 | 1.088 | 346 | 162 | 213 | 611 | 68.11% | 74.15% | 508 | 824 | 0.0502 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.29' | |
| AT4G22260 | IM | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.243 | 38 | 89 | 15 | 89 | 29.92% | 85.58% | 127 | 104 | 5.549 | 3.1 x 10-17 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.29' | |
| AT4G22260 | IM | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.229 | 175 | 108 | 31 | 53 | 61.84% | 63.10% | 283 | 84 | 0.951 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.29' | ||
| AT4G22250 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.32 x 10-7 | 1.412 | 306 | 55 | 227 | 362 | 84.76% | 61.46% | 361 | 589 | 2.221 | 5.54 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -2.94 | |
| AT4G22250 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.388 | 482 | 205 | 340 | 514 | 70.16% | 60.19% | 687 | 854 | 1.152 | 1.91 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.94' | ||
| AT4G22250 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.574 | 33 | 14 | 74 | 102 | 70.21% | 57.95% | 47 | 176 | 0.169 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.94' | |||
| AT4G22250 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 7.29 x 10-5 | 1.185 | 668 | 338 | 306 | 395 | 66.40% | 56.35% | 1006 | 701 | 1.157 | 1.97 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.94' | |
| AT4G22250 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.334 | 165 | 156 | 81 | 365 | 51.40% | 81.84% | 321 | 446 | 2.693 | 2.15 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.94' | ||
| AT4G22250 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 7.94 x 10-4 | 1.08 | 294 | 70 | 150 | 245 | 80.77% | 62.03% | 364 | 395 | 1.619 | 3.61 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.94' | |
| AT4G22250 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0197 | 0.0 | 325 | 185 | 181 | 290 | 63.73% | 61.57% | 510 | 471 | 0.688 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.94' | ||
| AT4G22250 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.207 | 160 | 126 | 15 | 71 | 55.94% | 82.56% | 286 | 86 | 1.704 | 9.68 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.94' | ||
| AT4G22250 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.109 | 232 | 68 | 110 | 176 | 77.33% | 61.54% | 300 | 286 | 1.284 | 4.84 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.94' | ||
| AT4G22240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.976 | 39 | 36 | 62 | 259 | 52.00% | 80.69% | 75 | 321 | 1.867 | 5.89 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .08 | ||
| AT4G22240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.7 x 10-6 | 1.576 | 72 | 149 | 137 | 449 | 32.58% | 76.62% | 221 | 586 | 4.233 | 3.7 x 10-29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |
| AT4G22240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 3.71 x 10-21 | 3.606 | 72 | 194 | 135 | 250 | 27.07% | 64.94% | 266 | 385 | 3.092 | 4.52 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |
| AT4G22240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 1.0 x 10-30 | 2.119 | 798 | 717 | 443 | 601 | 52.67% | 57.57% | 1515 | 1044 | 0.0533 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | ||
| AT4G22240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | paternally biased | not imprinted | 2.78 x 10-23 | 2.284 | 569 | 397 | 284 | 258 | 58.90% | 47.60% | 966 | 542 | 1.173 | 5.03 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |
| AT4G22240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | paternally biased | not imprinted | 0.0 | 3.211 | 703 | 864 | 484 | 595 | 44.86% | 55.14% | 1567 | 1079 | 1.213 | 6.04 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |
| AT4G22240 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.66 x 10-9 | 1.398 | 336 | 557 | 364 | 1343 | 37.63% | 78.68% | 893 | 1707 | 4.758 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |
| AT4G22240 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | paternally biased | not imprinted | 1.44 x 10-15 | 2.002 | 159 | 363 | 264 | 871 | 30.46% | 76.74% | 522 | 1135 | 5.449 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |
| AT4G22240 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 0.0 | 4.539 | 204 | 372 | 636 | 776 | 35.42% | 54.96% | 576 | 1412 | 1.689 | 4.17 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |
| AT4G22235 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.724 | 36 | 7 | 1 | 1 | 83.72% | 50.00% | 43 | 2 | 0.513 | TAIR10 | ||||
| AT4G22235 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G22235 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22235 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 4 | 1 | 5 | 20.00% | 83.33% | 5 | 6 | 0.203 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G22235 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22235 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 3 | 0 | 0 | 0.00% | 3 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G22235 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.0553 | 2 | 8 | 5 | 5 | 20.00% | 50.00% | 10 | 10 | 0.52 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G22235 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 15 | 100.00% | 0 | 15 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G22235 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 10 | 0 | 0 | 0.00% | 10 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G22233 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT4G22233 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22233 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22233 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22233 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22233 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22233 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G22233 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22233 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G22230 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.124 | 0 | 2 | 11 | 4 | 0.00% | 26.67% | 2 | 15 | 1.0 | TAIR10 |