| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G59840 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.158 | 87 | 28 | 42 | 82 | 75.65% | 66.13% | 115 | 124 | 0.157 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.5' | |||
| AT5G59840 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.703 | 133 | 20 | 35 | 25 | 86.93% | 41.67% | 153 | 60 | 3.517 | 1.32 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.5' | ||
| AT5G59830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0473 | 0.0 | 9 | 5 | 4 | 41 | 64.29% | 91.11% | 14 | 45 | 0.0684 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .19 | ||
| AT5G59830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 5.76 x 10-4 | 1.289 | 11 | 0 | 22 | 64 | 100.00% | 74.42% | 11 | 86 | 0.124 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | ||
| AT5G59830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 24 | 49 | 67.12% | 0 | 73 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | ||||
| AT5G59830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.761 | 51 | 14 | 11 | 18 | 78.46% | 62.07% | 65 | 29 | 0.293 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||
| AT5G59830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 8.33 x 10-4 | 1.593 | 14 | 16 | 44 | 41 | 46.67% | 48.24% | 30 | 85 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | ||
| AT5G59830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 1.95 x 10-5 | 2.106 | 11 | 6 | 0 | 46 | 64.71% | 100.00% | 17 | 46 | 2.507 | 3.73 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |
| AT5G59830 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 82 | 49 | 74 | 171 | 62.60% | 69.80% | 131 | 245 | 0.298 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||
| AT5G59830 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.12 x 10-9 | 4.663 | 52 | 0 | 6 | 20 | 100.00% | 76.92% | 52 | 26 | 1.679 | 1.55 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |
| AT5G59830 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.606 | 75 | 1 | 60 | 0 | 98.68% | 0.00% | 76 | 60 | 204.875 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | ||
| AT5G59820 | RHL41 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 3.442 | 326 | 61 | 129 | 529 | 84.24% | 80.40% | 387 | 658 | 0.258 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.74 | |
| AT5G59820 | RHL41 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.54 x 10-8 | 1.422 | 361 | 116 | 200 | 530 | 75.68% | 72.60% | 477 | 730 | 0.381 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.74' | |
| AT5G59820 | RHL41 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 4.343 | 939 | 114 | 88 | 286 | 89.17% | 76.47% | 1053 | 374 | 1.645 | 1.92 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.74' |
| AT5G59820 | RHL41 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0289 | 0.0 | 236 | 82 | 21 | 59 | 74.21% | 73.75% | 318 | 80 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.74' | |
| AT5G59820 | RHL41 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 16 | 0 | 0 | 0 | 100.00% | 16 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.74' | |||
| AT5G59820 | RHL41 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 4.74 x 10-20 | 22.295 | 28 | 0 | 0 | 47 | 100.00% | 100.00% | 28 | 47 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.74' | |
| AT5G59820 | RHL41 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 4.38 x 10-18 | 1.961 | 526 | 113 | 173 | 426 | 82.32% | 71.12% | 639 | 599 | 1.294 | 1.4 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.74' |
| AT5G59820 | RHL41 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.93 x 10-5 | 1.438 | 87 | 14 | 55 | 122 | 86.14% | 68.93% | 101 | 177 | 1.169 | 0.0024 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.74' |
| AT5G59820 | RHL41 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.96 x 10-7 | 1.935 | 223 | 2 | 484 | 148 | 99.11% | 23.42% | 225 | 632 | 82.781 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.74' |
| AT5G59810 | SBT5.4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 94.699 | 59 | 0 | 2 | 181 | 100.00% | 98.91% | 59 | 183 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.83 | |
| AT5G59810 | SBT5.4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 268.12 | 122 | 0 | 1 | 192 | 100.00% | 99.48% | 122 | 193 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.83' | |
| AT5G59810 | SBT5.4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 25.056 | 150 | 0 | 24 | 96 | 100.00% | 80.00% | 150 | 120 | 6.264 | 2.36 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.83' |
| AT5G59810 | SBT5.4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 7.05 x 10-28 | 42.37 | 61 | 0 | 0 | 41 | 100.00% | 100.00% | 61 | 41 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.83' | |
| AT5G59810 | SBT5.4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 x 10-30 | 52.196 | 39 | 0 | 0 | 79 | 100.00% | 100.00% | 39 | 79 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.83' | |
| AT5G59810 | SBT5.4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 6.56 x 10-18 | 19.652 | 58 | 0 | 0 | 20 | 100.00% | 100.00% | 58 | 20 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.83' | |
| AT5G59810 | SBT5.4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 819.808 | 217 | 0 | 0 | 223 | 100.00% | 100.00% | 217 | 223 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.83' | |
| AT5G59810 | SBT5.4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 188.438 | 227 | 0 | 0 | 49 | 100.00% | 100.00% | 227 | 49 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.83' | |
| AT5G59810 | SBT5.4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.45 x 10-15 | 5.289 | 89 | 1 | 51 | 97 | 98.89% | 65.54% | 90 | 148 | 5.849 | 4.08 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.83' |
| AT5G59800 | MBD7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0847 | 197 | 46 | 254 | 339 | 81.07% | 57.17% | 243 | 593 | 1.981 | 1.62 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.14 | |
| AT5G59800 | MBD7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.4 x 10-5 | 1.402 | 102 | 81 | 240 | 345 | 55.74% | 58.97% | 183 | 585 | 0.585 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | |
| AT5G59800 | MBD7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 9.87 x 10-5 | 1.136 | 301 | 121 | 155 | 420 | 71.33% | 73.04% | 422 | 575 | 0.644 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | |
| AT5G59800 | MBD7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.187 | 382 | 187 | 89 | 228 | 67.14% | 71.92% | 569 | 317 | 0.328 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | ||
| AT5G59800 | MBD7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 7.87 x 10-5 | 1.227 | 317 | 157 | 169 | 183 | 66.88% | 51.99% | 474 | 352 | 1.25 | 4.11 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' |
| AT5G59800 | MBD7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0799 | 276 | 137 | 133 | 345 | 66.83% | 72.18% | 413 | 478 | 0.129 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | ||
| AT5G59800 | MBD7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.868 | 493 | 139 | 258 | 307 | 78.01% | 54.34% | 632 | 565 | 2.094 | 3.77 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | |
| AT5G59800 | MBD7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 5.86 x 10-10 | 3.417 | 58 | 0 | 98 | 116 | 100.00% | 54.21% | 58 | 214 | 9.756 | 4.44 x 10-13 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' |
| AT5G59800 | MBD7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.19 x 10-4 | 1.629 | 28 | 20 | 190 | 153 | 58.33% | 44.61% | 48 | 343 | 0.103 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | |
| AT5G59790 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 6.56 x 10-3 | 1.039 | 136 | 69 | 79 | 285 | 66.34% | 78.30% | 205 | 364 | 1.07 | 6.95 x 10-3 | TAIR10 | ||
| AT5G59790 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.59 | 179 | 144 | 103 | 291 | 55.42% | 73.86% | 323 | 394 | 1.459 | 1.53 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G59790 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 5.63 x 10-23 | 11.044 | 119 | 0 | 40 | 83 | 100.00% | 67.48% | 119 | 123 | 10.26 | 1.84 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G59790 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 218 | 123 | 60 | 136 | 63.93% | 69.39% | 341 | 196 | 0.431 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G59790 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 4.94 x 10-4 | 1.162 | 120 | 8 | 72 | 63 | 93.75% | 46.67% | 128 | 135 | 6.073 | 2.34 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G59790 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.016 | 0.0 | 20 | 1 | 9 | 16 | 95.24% | 64.00% | 21 | 25 | 0.0 | 0.0211 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G59790 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0116 | 0.0 | 539 | 266 | 352 | 909 | 66.96% | 72.09% | 805 | 1261 | 0.0 | 0.0359 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G59790 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | paternally biased | not imprinted | 2.28 x 10-10 | 2.902 | 52 | 143 | 38 | 71 | 26.67% | 65.14% | 195 | 109 | 2.532 | 3.7 x 10-10 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G59790 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 6.36 x 10-21 | 5.314 | 185 | 71 | 216 | 33 | 72.27% | 13.25% | 256 | 249 | 9.019 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G59780 | MYB59 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.551 | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .91 | ||
| AT5G59780 | MYB59 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 13 | 0 | 0 | 0 | 100.00% | 13 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.91' | |||
| AT5G59780 | MYB59 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 89 | 0 | 0 | 0 | 100.00% | 89 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.91' | |||
| AT5G59780 | MYB59 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.91' | |||
| AT5G59780 | MYB59 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.91' | ||||
| AT5G59780 | MYB59 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.91' | ||||
| AT5G59780 | MYB59 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.0359 | 0.0 | 6 | 0 | 0 | 3 | 100.00% | 100.00% | 6 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.91' | |
| AT5G59780 | MYB59 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 17 | 0 | 0 | 0 | 100.00% | 17 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.91' | |||
| AT5G59780 | MYB59 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 29 | 0 | 0.00% | 0 | 29 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.91' | |||
| AT5G59770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.472 | 2 | 2 | 9 | 9 | 50.00% | 50.00% | 4 | 18 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.21 | |||
| AT5G59770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0508 | 5 | 6 | 39 | 42 | 45.45% | 51.85% | 11 | 81 | 0.884 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | |||
| AT5G59770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 14 | 0 | 0.00% | 0 | 14 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | ||||
| AT5G59770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 169 | 67 | 44 | 63 | 71.61% | 58.88% | 236 | 107 | 0.0794 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | |||
| AT5G59770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 30 | 0 | 24 | 0 | 100.00% | 0.00% | 30 | 24 | 48.791 | 3.14 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | ||
| AT5G59770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 31 | 51 | 0 | 0 | 37.80% | 82 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | ||||
| AT5G59770 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.967 | 92 | 26 | 52 | 66 | 77.97% | 55.93% | 118 | 118 | 1.261 | 1.72 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | ||
| AT5G59770 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.85 x 10-4 | 3.248 | 83 | 0 | 1 | 4 | 100.00% | 80.00% | 83 | 5 | 0.0785 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | ||
| AT5G59770 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | not imprinted | 1.73 x 10-9 | 4.981 | 14 | 0 | 0 | 21 | 100.00% | 100.00% | 14 | 21 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | ||
| AT5G59760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.13 | |||||
| AT5G59760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |||||
| AT5G59760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |||||
| AT5G59760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |||||
| AT5G59760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |||||
| AT5G59760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |||||
| AT5G59760 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |||||
| AT5G59760 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |||||
| AT5G59760 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |||||
| AT5G59750 | RIBA3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.333 | 12 | 7 | 25 | 23 | 63.16% | 47.92% | 19 | 48 | 0.469 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.14 | ||
| AT5G59750 | RIBA3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0104 | 0.0 | 19 | 3 | 18 | 53 | 86.36% | 74.65% | 22 | 71 | 0.523 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.14' | |
| AT5G59750 | RIBA3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 1 | 62 | 0 | 43 | 1.59% | 100.00% | 63 | 43 | 121.142 | 3.58 x 10-28 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.14' | |
| AT5G59750 | RIBA3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 43 | 16 | 11 | 13 | 72.88% | 54.17% | 59 | 24 | 0.284 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.14' | ||
| AT5G59750 | RIBA3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | paternally biased | not imprinted | 1.44 x 10-5 | 6.855 | 65 | 34 | 19 | 0 | 65.66% | 0.00% | 99 | 19 | 6.263 | 7.28 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.14' |
| AT5G59750 | RIBA3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.755 | 41 | 7 | 40 | 22 | 85.42% | 35.48% | 48 | 62 | 2.914 | 3.03 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.14' | |
| AT5G59750 | RIBA3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.502 | 8 | 2 | 15 | 29 | 80.00% | 65.91% | 10 | 44 | 0.656 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.14' | ||
| AT5G59750 | RIBA3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 39 | 100.00% | 0 | 39 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.14' | |||
| AT5G59750 | RIBA3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 0 | 41 | 0 | 26 | 0.00% | 100.00% | 41 | 26 | 72.238 | 8.51 x 10-19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.14' | |
| AT5G59740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.441 | 69 | 19 | 73 | 113 | 78.41% | 60.75% | 88 | 186 | 1.059 | 0.0126 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .07 | ||
| AT5G59740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.776 | 62 | 27 | 165 | 318 | 69.66% | 65.84% | 89 | 483 | 0.684 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||
| AT5G59740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 9.57 x 10-8 | 2.452 | 57 | 0 | 78 | 71 | 100.00% | 47.65% | 57 | 149 | 11.836 | 1.36 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |
| AT5G59740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.65 | 25 | 19 | 5 | 10 | 56.82% | 66.67% | 44 | 15 | 0.798 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||
| AT5G59740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 1.76 x 10-6 | 2.061 | 35 | 13 | 0 | 22 | 72.92% | 100.00% | 48 | 22 | 1.137 | 9.77 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |
| AT5G59740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 0.0958 | 1 | 0 | 0 | 15 | 100.00% | 100.00% | 1 | 15 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||
| AT5G59740 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.301 | 320 | 145 | 307 | 470 | 68.82% | 60.49% | 465 | 777 | 1.026 | 0.0102 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT5G59740 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.39 x 10-7 | 1.626 | 117 | 35 | 23 | 102 | 76.97% | 81.60% | 152 | 125 | 0.453 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT5G59740 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.44 x 10-4 | 1.677 | 104 | 15 | 120 | 14 | 87.39% | 10.45% | 119 | 134 | 20.149 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |
| AT5G59732 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT5G59732 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G59732 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 13 | 29 | 69.05% | 0 | 42 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G59732 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G59732 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G59732 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G59732 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G59732 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 0.343 | 100 | 27 | 26 | 42 | 78.74% | 61.76% | 127 | 68 | 0.0 | 0.0259 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |