| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G38670 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 51 | 29 | 10 | 24 | 63.75% | 70.59% | 80 | 34 | 0.768 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.44' | |||
| AT4G38670 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.19 x 10-5 | 1.639 | 35 | 31 | 0 | 36 | 53.03% | 100.00% | 66 | 36 | 5.142 | 1.34 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.44' | |
| AT4G38670 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 1.48 x 10-19 | 9.872 | 52 | 4 | 2 | 60 | 92.86% | 96.77% | 56 | 62 | 0.513 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.44' | ||
| AT4G38670 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.44' | |||||
| AT4G38670 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.44' | |||||
| AT4G38670 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.44' | |||||
| AT4G38660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0391 | 0.0 | 500 | 478 | 161 | 467 | 51.12% | 74.36% | 978 | 628 | 2.046 | 8.73 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.39 | |
| AT4G38660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.406 | 349 | 285 | 198 | 570 | 55.05% | 74.22% | 634 | 768 | 1.711 | 7.06 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' | ||
| AT4G38660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 7.48 x 10-7 | 1.349 | 226 | 402 | 130 | 480 | 35.99% | 78.69% | 628 | 610 | 4.599 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' | |
| AT4G38660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.94 | 362 | 296 | 107 | 332 | 55.02% | 75.63% | 658 | 439 | 1.751 | 3.45 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' | ||
| AT4G38660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 3.08 x 10-9 | 1.49 | 252 | 431 | 178 | 592 | 36.90% | 76.88% | 683 | 770 | 4.12 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' | |
| AT4G38660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.259 | 242 | 262 | 132 | 676 | 48.02% | 83.66% | 504 | 808 | 3.865 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' | ||
| AT4G38660 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.072 | 221 | 91 | 115 | 268 | 70.83% | 69.97% | 312 | 383 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' | |||
| AT4G38660 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 2.7 x 10-9 | 3.652 | 28 | 0 | 12 | 45 | 100.00% | 78.95% | 28 | 57 | 1.039 | 0.011 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' | |
| AT4G38660 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.276 | 102 | 28 | 36 | 57 | 78.46% | 61.29% | 130 | 93 | 1.004 | 8.44 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' | ||
| AT4G38650 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0411 | 0.0 | 47 | 18 | 101 | 70 | 72.31% | 40.94% | 65 | 171 | 1.626 | 9.49 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.35 | |
| AT4G38650 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 3.69 x 10-7 | 2.416 | 49 | 0 | 83 | 85 | 100.00% | 50.60% | 49 | 168 | 9.215 | 8.82 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.35' | |
| AT4G38650 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 8.58 x 10-4 | 0.0 | 36 | 0 | 62 | 37 | 100.00% | 37.37% | 36 | 99 | 10.48 | 3.88 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.35' | |
| AT4G38650 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.457 | 19 | 6 | 1 | 6 | 76.00% | 85.71% | 25 | 7 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.35' | |||
| AT4G38650 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 5.89 x 10-15 | 12.35 | 27 | 0 | 0 | 27 | 100.00% | 100.00% | 27 | 27 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.35' | ||
| AT4G38650 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 0 | 0 | 15 | 0 | 0.00% | 0 | 15 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.35' | ||||
| AT4G38650 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.712 | 49 | 20 | 111 | 224 | 71.01% | 66.87% | 69 | 335 | 0.75 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.35' | |||
| AT4G38650 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 11 | 39 | 78.00% | 0 | 50 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.35' | ||||
| AT4G38650 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | not imprinted | 1.08 x 10-9 | 5.218 | 14 | 0 | 0 | 22 | 100.00% | 100.00% | 14 | 22 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.35' | ||
| AT4G38640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 124 | 37 | 174 | 217 | 77.02% | 55.50% | 161 | 391 | 1.528 | 1.11 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.21 | ||
| AT4G38640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.88 x 10-4 | 1.141 | 196 | 62 | 254 | 565 | 75.97% | 68.99% | 258 | 819 | 0.0724 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | ||
| AT4G38640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.984 | 216 | 70 | 111 | 140 | 75.52% | 55.78% | 286 | 251 | 1.459 | 3.67 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | ||
| AT4G38640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.586 | 277 | 96 | 66 | 111 | 74.26% | 62.71% | 373 | 177 | 1.005 | 0.0265 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | ||
| AT4G38640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.179 | 239 | 137 | 104 | 187 | 63.56% | 64.26% | 376 | 291 | 0.981 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | |||
| AT4G38640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.83 x 10-7 | 1.491 | 198 | 33 | 140 | 247 | 85.71% | 63.82% | 231 | 387 | 1.917 | 7.3 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | |
| AT4G38640 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.271 | 322 | 139 | 240 | 497 | 69.85% | 67.44% | 461 | 737 | 0.584 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | |||
| AT4G38640 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.263 | 15 | 18 | 7 | 63 | 45.45% | 90.00% | 33 | 70 | 2.572 | 5.43 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | ||
| AT4G38640 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.125 | 27 | 8 | 96 | 57 | 77.14% | 37.25% | 35 | 153 | 1.9 | 3.15 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | ||
| AT4G38630 | RPN10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.693 | 632 | 302 | 595 | 1207 | 67.67% | 66.98% | 934 | 1802 | 0.911 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.51 | ||
| AT4G38630 | RPN10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.15 x 10-5 | 1.151 | 711 | 250 | 722 | 1475 | 73.99% | 67.14% | 961 | 2197 | 1.103 | 4.45 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.51' |
| AT4G38630 | RPN10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0373 | 0.0 | 335 | 122 | 115 | 232 | 73.30% | 66.86% | 457 | 347 | 0.0678 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.51' | |
| AT4G38630 | RPN10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 589 | 255 | 166 | 295 | 69.79% | 63.99% | 844 | 461 | 0.106 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.51' | ||
| AT4G38630 | RPN10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 3.02 x 10-9 | 2.001 | 132 | 14 | 65 | 128 | 90.41% | 66.32% | 146 | 193 | 2.064 | 3.02 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.51' |
| AT4G38630 | RPN10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.24 x 10-3 | 0.0 | 4 | 0 | 0 | 12 | 100.00% | 100.00% | 4 | 12 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.51' | |
| AT4G38630 | RPN10 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 7.9 x 10-5 | 1.097 | 958 | 403 | 927 | 2076 | 70.39% | 69.13% | 1361 | 3003 | 0.592 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.51' | |
| AT4G38630 | RPN10 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.926 | 208 | 64 | 13 | 17 | 76.47% | 56.67% | 272 | 30 | 0.0 | 0.0378 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.51' | |
| AT4G38630 | RPN10 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 20 | 4 | 142 | 115 | 83.33% | 44.75% | 24 | 257 | 1.729 | 5.22 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.51' | |
| AT4G38620 | MYB4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 24.382 | 131 | 33 | 2 | 263 | 79.88% | 99.25% | 164 | 265 | 6.189 | 5.18 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.89 |
| AT4G38620 | MYB4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 1025.386 | 364 | 1 | 1 | 363 | 99.73% | 99.73% | 365 | 364 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.89' | |
| AT4G38620 | MYB4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 1627.52 | 658 | 0 | 0 | 146 | 100.00% | 100.00% | 658 | 146 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.89' | |
| AT4G38620 | MYB4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 1105.617 | 557 | 1 | 0 | 173 | 99.82% | 100.00% | 558 | 173 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.89' | |
| AT4G38620 | MYB4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0 | 1225.265 | 441 | 0 | 0 | 164 | 100.00% | 100.00% | 441 | 164 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.89' | |
| AT4G38620 | MYB4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0 | 95.363 | 177 | 4 | 0 | 86 | 97.79% | 100.00% | 181 | 86 | 0.388 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.89' | |
| AT4G38620 | MYB4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 342.994 | 106 | 0 | 0 | 191 | 100.00% | 100.00% | 106 | 191 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.89' | |
| AT4G38620 | MYB4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 51.078 | 45 | 0 | 0 | 67 | 100.00% | 100.00% | 45 | 67 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.89' | |
| AT4G38620 | MYB4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.52 x 10-22 | 10.174 | 110 | 0 | 55 | 108 | 100.00% | 66.26% | 110 | 163 | 10.555 | 1.3 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.89' |
| AT4G38600 | KAK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.03 x 10-4 | 1.134 | 409 | 104 | 422 | 681 | 79.73% | 61.74% | 513 | 1103 | 1.741 | 2.31 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.41 |
| AT4G38600 | KAK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.49 x 10-4 | 1.064 | 1008 | 310 | 969 | 1560 | 76.48% | 61.68% | 1318 | 2529 | 1.642 | 1.04 x 10-19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' |
| AT4G38600 | KAK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.6 x 10-10 | 1.262 | 1166 | 370 | 595 | 1182 | 75.91% | 66.52% | 1536 | 1777 | 1.279 | 7.15 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' |
| AT4G38600 | KAK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.03 x 10-3 | 1.033 | 1698 | 644 | 413 | 798 | 72.50% | 65.90% | 2342 | 1211 | 1.107 | 3.43 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' |
| AT4G38600 | KAK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 6.0 x 10-30 | 1.892 | 1296 | 662 | 758 | 672 | 66.19% | 46.99% | 1958 | 1430 | 1.813 | 4.49 x 10-28 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' |
| AT4G38600 | KAK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.509 | 500 | 241 | 248 | 522 | 67.48% | 67.79% | 741 | 770 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' | ||
| AT4G38600 | KAK | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.48 x 10-4 | 1.059 | 1559 | 617 | 1428 | 2802 | 71.65% | 66.24% | 2176 | 4230 | 1.101 | 4.86 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' |
| AT4G38600 | KAK | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0767 | 867 | 380 | 403 | 599 | 69.53% | 59.78% | 1247 | 1002 | 1.199 | 3.46 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' | |
| AT4G38600 | KAK | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.12 x 10-3 | 1.018 | 1760 | 486 | 1085 | 977 | 78.36% | 47.38% | 2246 | 2062 | 3.336 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' |
| AT4G38590 | BGAL14 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.14 | |||
| AT4G38590 | BGAL14 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 4 | 0 | 7 | 0.00% | 100.00% | 4 | 7 | 1.897 | 8.73 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | |
| AT4G38590 | BGAL14 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | ||||
| AT4G38590 | BGAL14 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.604 | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | ||
| AT4G38590 | BGAL14 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | ||||
| AT4G38590 | BGAL14 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | ||||
| AT4G38590 | BGAL14 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 2 | 0 | 1 | 2 | 100.00% | 66.67% | 2 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | ||
| AT4G38590 | BGAL14 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | ||||
| AT4G38590 | BGAL14 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.14' | ||||
| AT4G38580 | FP6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | not imprinted | 1.0 | 8 | 3 | 2 | 3 | 72.73% | 60.00% | 11 | 5 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.63 | ||
| AT4G38580 | FP6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.484 | 1 | 3 | 25 | 42 | 25.00% | 62.69% | 4 | 67 | 0.424 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.63' | ||
| AT4G38580 | FP6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.91 x 10-3 | 1.383 | 81 | 56 | 26 | 21 | 59.12% | 44.68% | 137 | 47 | 0.118 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.63' | |
| AT4G38580 | FP6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.927 | 43 | 20 | 16 | 24 | 68.25% | 60.00% | 63 | 40 | 0.647 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.63' | ||
| AT4G38580 | FP6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 8.53 x 10-3 | 1.024 | 100 | 29 | 81 | 42 | 77.52% | 34.15% | 129 | 123 | 3.045 | 1.08 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.63' |
| AT4G38580 | FP6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.524 | 146 | 28 | 57 | 54 | 83.91% | 48.65% | 174 | 111 | 2.544 | 1.54 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.63' | |
| AT4G38580 | FP6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.63' | ||||
| AT4G38580 | FP6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.63' | ||||
| AT4G38580 | FP6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.63' | ||||
| AT4G38570 | PIS2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0945 | 64 | 15 | 74 | 126 | 81.01% | 63.00% | 79 | 200 | 1.081 | 0.0131 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.28 | |
| AT4G38570 | PIS2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.813 | 16 | 12 | 61 | 151 | 57.14% | 71.23% | 28 | 212 | 0.225 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.28' | ||
| AT4G38570 | PIS2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.15 x 10-19 | 8.014 | 81 | 0 | 60 | 124 | 100.00% | 67.39% | 81 | 184 | 7.506 | 3.8 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.28' |
| AT4G38570 | PIS2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.951 | 191 | 53 | 56 | 55 | 78.28% | 49.55% | 244 | 111 | 1.872 | 1.07 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.28' | |
| AT4G38570 | PIS2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 3.64 x 10-4 | 1.174 | 135 | 58 | 26 | 109 | 69.95% | 80.74% | 193 | 135 | 0.0 | 0.0417 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.28' |
| AT4G38570 | PIS2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 3.37 x 10-11 | 3.416 | 68 | 6 | 12 | 60 | 91.89% | 83.33% | 74 | 72 | 0.183 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.28' | |
| AT4G38570 | PIS2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.49 x 10-4 | 1.139 | 284 | 121 | 154 | 444 | 70.12% | 74.25% | 405 | 598 | 0.302 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.28' | |
| AT4G38570 | PIS2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.17 x 10-3 | 1.073 | 235 | 243 | 61 | 146 | 49.16% | 70.53% | 478 | 207 | 1.536 | 4.77 x 10-7 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.28' |
| AT4G38570 | PIS2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.24 x 10-6 | 1.25 | 242 | 102 | 140 | 449 | 70.35% | 76.23% | 344 | 589 | 0.0624 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.28' | |
| AT4G38560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .01 | |||||
| AT4G38560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 2 | 1 | 33.33% | 0 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | ||||
| AT4G38560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT4G38560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | 0.567 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||
| AT4G38560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT4G38560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT4G38560 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT4G38560 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT4G38560 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT4G38552 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0235 | 0.0 | 19 | 3 | 17 | 49 | 86.36% | 74.24% | 22 | 66 | 0.567 | TAIR10 | |||
| AT4G38552 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0858 | 44 | 9 | 40 | 67 | 83.02% | 62.62% | 53 | 107 | 0.0 | 0.0259 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G38552 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.234 | 161 | 71 | 51 | 121 | 69.40% | 70.35% | 232 | 172 | 0.993 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G38552 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.136 | 60 | 7 | 16 | 22 | 89.55% | 57.89% | 67 | 38 | 1.541 | 1.99 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |