| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G04560 | DME | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 4.0 x 10-5 | 1.811 | 68 | 57 | 39 | 32 | 54.40% | 45.07% | 125 | 71 | 0.304 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.21' | |
| AT5G04560 | DME | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0213 | 0.0 | 755 | 333 | 399 | 881 | 69.39% | 68.83% | 1088 | 1280 | 0.948 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.21' | |
| AT5G04560 | DME | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.147 | 75 | 50 | 38 | 64 | 60.00% | 62.75% | 125 | 102 | 0.781 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.21' | ||
| AT5G04560 | DME | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.63 x 10-3 | 0.0 | 155 | 7 | 234 | 110 | 95.68% | 31.98% | 162 | 344 | 17.92 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.21' |
| AT5G04550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 2 | 1 | 3 | 6 | 66.67% | 66.67% | 3 | 9 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.41 | |||
| AT5G04550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 2 | 0 | 31 | 31 | 100.00% | 50.00% | 2 | 62 | 0.637 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' | |||
| AT5G04550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | no data | 1.83 x 10-20 | 23.294 | 55 | 0 | 0 | 25 | 100.00% | 100.00% | 55 | 25 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' | ||
| AT5G04550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.169 | 310 | 136 | 67 | 160 | 69.51% | 70.48% | 446 | 227 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' | |||
| AT5G04550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.551 | 85 | 82 | 62 | 203 | 50.90% | 76.60% | 167 | 265 | 1.758 | 1.67 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' | ||
| AT5G04550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.663 | 138 | 99 | 57 | 145 | 58.23% | 71.78% | 237 | 202 | 1.04 | 6.37 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' | ||
| AT5G04550 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0979 | 169 | 62 | 105 | 222 | 73.16% | 67.89% | 231 | 327 | 0.331 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' | |||
| AT5G04550 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 4.29 x 10-7 | 2.547 | 21 | 1 | 39 | 157 | 95.45% | 80.10% | 22 | 196 | 0.117 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' | ||
| AT5G04550 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 7.22 x 10-7 | 2.646 | 16 | 0 | 42 | 150 | 100.00% | 78.12% | 16 | 192 | 0.0546 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.41' | ||
| AT5G04540 | MTM2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.771 | 114 | 66 | 191 | 402 | 63.33% | 67.79% | 180 | 593 | 0.454 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.06 | ||
| AT5G04540 | MTM2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.349 | 187 | 81 | 389 | 796 | 69.78% | 67.17% | 268 | 1185 | 0.571 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | ||
| AT5G04540 | MTM2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.9 x 10-16 | 1.971 | 308 | 53 | 254 | 535 | 85.32% | 67.81% | 361 | 789 | 1.778 | 3.67 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' |
| AT5G04540 | MTM2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.657 | 204 | 128 | 68 | 146 | 61.45% | 68.22% | 332 | 214 | 0.277 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | ||
| AT5G04540 | MTM2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.146 | 410 | 136 | 131 | 217 | 75.09% | 62.36% | 546 | 348 | 1.208 | 1.28 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |
| AT5G04540 | MTM2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 0.0 | 4.854 | 214 | 36 | 41 | 264 | 85.60% | 86.56% | 250 | 305 | 0.916 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |
| AT5G04540 | MTM2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.0368 | 0.0 | 63 | 34 | 140 | 163 | 64.95% | 53.80% | 97 | 303 | 0.128 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |
| AT5G04540 | MTM2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 1 | 0 | 10 | 0 | 100.00% | 0.00% | 1 | 10 | 0.122 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | ||
| AT5G04540 | MTM2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 45 | 0 | 0 | 0 | 100.00% | 45 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |||
| AT5G04530 | KCS19 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 535.292 | 701 | 13 | 4 | 704 | 98.18% | 99.44% | 714 | 708 | 0.11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 4.37 | |
| AT5G04530 | KCS19 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 14970.044 | 1523 | 1 | 0 | 856 | 99.93% | 100.00% | 1524 | 856 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.37' | |
| AT5G04530 | KCS19 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 3344.656 | 904 | 1 | 1 | 476 | 99.89% | 99.79% | 905 | 477 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.37' | |
| AT5G04530 | KCS19 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 9271.532 | 4794 | 2 | 6 | 741 | 99.96% | 99.20% | 4796 | 747 | 2.432 | 7.44 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.37' |
| AT5G04530 | KCS19 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0 | 3541.846 | 1223 | 1 | 2 | 480 | 99.92% | 99.59% | 1224 | 482 | 0.246 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.37' | |
| AT5G04530 | KCS19 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0 | 5346.746 | 1879 | 3 | 0 | 386 | 99.84% | 100.00% | 1882 | 386 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.37' | |
| AT5G04530 | KCS19 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 25994.927 | 2823 | 8 | 2 | 4246 | 99.72% | 99.95% | 2831 | 4248 | 0.0 | 0.0458 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.37' |
| AT5G04530 | KCS19 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 2477.24 | 376 | 1 | 1 | 848 | 99.73% | 99.88% | 377 | 849 | 0.611 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.37' | |
| AT5G04530 | KCS19 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 63.286 | 294 | 2 | 270 | 1933 | 99.32% | 87.74% | 296 | 2203 | 4.939 | 4.4 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.37' |
| AT5G04520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.7 x 10-4 | 1.503 | 22 | 0 | 5 | 14 | 100.00% | 73.68% | 22 | 19 | 0.0 | 0.0418 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.12 | |
| AT5G04520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.306 | 17 | 13 | 12 | 16 | 56.67% | 57.14% | 30 | 28 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||
| AT5G04520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 3 | 4 | 57.14% | 0 | 7 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G04520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.607 | 11 | 3 | 1 | 5 | 78.57% | 83.33% | 14 | 6 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||
| AT5G04520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||||
| AT5G04520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||||
| AT5G04520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.595 | 28 | 10 | 16 | 34 | 73.68% | 68.00% | 38 | 50 | 0.814 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||
| AT5G04520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 22 | 8 | 26.67% | 0 | 30 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G04520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 20 | 0 | 0 | 0 | 100.00% | 20 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G04510 | PDK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.272 | 29 | 8 | 32 | 69 | 78.38% | 68.32% | 37 | 101 | 0.473 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.28 | ||
| AT5G04510 | PDK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.1 x 10-8 | 3.101 | 29 | 0 | 37 | 89 | 100.00% | 70.63% | 29 | 126 | 2.144 | 6.91 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.28' |
| AT5G04510 | PDK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.42 x 10-6 | 2.061 | 38 | 0 | 18 | 27 | 100.00% | 60.00% | 38 | 45 | 3.663 | 8.24 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.28' |
| AT5G04510 | PDK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 49 | 34 | 19 | 50 | 59.04% | 72.46% | 83 | 69 | 0.224 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.28' | ||
| AT5G04510 | PDK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.04 x 10-18 | 8.676 | 83 | 31 | 0 | 75 | 72.81% | 100.00% | 114 | 75 | 4.841 | 6.92 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.28' |
| AT5G04510 | PDK1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 9.61 x 10-7 | 2.874 | 16 | 27 | 0 | 137 | 37.21% | 100.00% | 43 | 137 | 32.736 | 2.09 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.28' |
| AT5G04510 | PDK1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.74 x 10-7 | 1.525 | 185 | 49 | 78 | 223 | 79.06% | 74.09% | 234 | 301 | 0.323 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.28' | |
| AT5G04510 | PDK1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 74 | 24 | 60 | 77 | 75.51% | 56.20% | 98 | 137 | 1.088 | 4.04 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.28' | |
| AT5G04510 | PDK1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.224 | 220 | 35 | 35 | 35 | 86.27% | 50.00% | 255 | 70 | 2.771 | 1.7 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.28' | |
| AT5G04500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 9.78 x 10-4 | 1.239 | 39 | 5 | 36 | 83 | 88.64% | 69.75% | 44 | 119 | 0.0 | 0.0395 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .37 | |
| AT5G04500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0767 | 45 | 18 | 70 | 203 | 71.43% | 74.36% | 63 | 273 | 0.772 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.37' | |||
| AT5G04500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 1.41 x 10-9 | 2.756 | 33 | 70 | 69 | 104 | 32.04% | 60.12% | 103 | 173 | 1.565 | 1.37 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.37' | |
| AT5G04500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.37' | |||||
| AT5G04500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.37' | |||||
| AT5G04500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.37' | |||||
| AT5G04500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.898 | 249 | 131 | 257 | 515 | 65.53% | 66.71% | 380 | 772 | 0.86 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.37' | |||
| AT5G04500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.37 x 10-9 | 3.246 | 47 | 0 | 99 | 136 | 100.00% | 57.87% | 47 | 235 | 6.879 | 5.03 x 10-10 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.37' | |
| AT5G04500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 101 | 12 | 167 | 81 | 89.38% | 32.66% | 113 | 248 | 7.384 | 4.71 x 10-25 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.37' | ||
| AT5G04490 | VTE5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.381 | 140 | 40 | 99 | 149 | 77.78% | 60.08% | 180 | 248 | 1.272 | 4.68 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .11 | |
| AT5G04490 | VTE5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.589 | 35 | 18 | 82 | 131 | 66.04% | 61.50% | 53 | 213 | 0.772 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | ||
| AT5G04490 | VTE5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0018 | 0.0 | 23 | 0 | 20 | 19 | 100.00% | 48.72% | 23 | 39 | 3.397 | 1.91 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' |
| AT5G04490 | VTE5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.141 | 150 | 86 | 54 | 79 | 63.56% | 59.40% | 236 | 133 | 0.681 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | ||
| AT5G04490 | VTE5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 94 | 3 | 10 | 0 | 96.91% | 0.00% | 97 | 10 | 27.312 | 2.69 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | |
| AT5G04490 | VTE5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 77 | 0 | 37 | 0 | 100.00% | 0.00% | 77 | 37 | 193.063 | 8.0 x 10-30 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | |
| AT5G04490 | VTE5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.237 | 123 | 38 | 81 | 140 | 76.40% | 63.35% | 161 | 221 | 0.0 | 0.0201 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | |
| AT5G04490 | VTE5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0132 | 1.177 | 17 | 31 | 10 | 16 | 35.42% | 61.54% | 48 | 26 | 0.0686 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | |
| AT5G04490 | VTE5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.39 x 10-8 | 2.777 | 79 | 0 | 78 | 59 | 100.00% | 43.07% | 79 | 137 | 19.418 | 7.19 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' |
| AT5G04480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 5.29 x 10-4 | 1.187 | 156 | 34 | 164 | 297 | 82.11% | 64.43% | 190 | 461 | 1.448 | 3.17 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .24 | |
| AT5G04480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0116 | 0.0 | 198 | 71 | 255 | 550 | 73.61% | 68.32% | 269 | 805 | 0.19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT5G04480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0266 | 0.0 | 427 | 172 | 82 | 188 | 71.29% | 69.63% | 599 | 270 | 0.707 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT5G04480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0153 | 1.005 | 575 | 335 | 144 | 465 | 63.19% | 76.35% | 910 | 609 | 1.364 | 5.3 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |
| AT5G04480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.131 | 421 | 176 | 92 | 195 | 70.52% | 67.94% | 597 | 287 | 0.522 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |||
| AT5G04480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.615 | 288 | 104 | 169 | 220 | 73.47% | 56.56% | 392 | 389 | 1.392 | 1.9 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT5G04480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 3.43 x 10-3 | 1.047 | 122 | 26 | 97 | 169 | 82.43% | 63.53% | 148 | 266 | 1.379 | 1.94 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |
| AT5G04480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.443 | 23 | 32 | 22 | 80 | 41.82% | 78.43% | 55 | 102 | 1.867 | 1.61 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT5G04480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.68 x 10-3 | 1.0 | 132 | 11 | 31 | 31 | 92.31% | 50.00% | 143 | 62 | 4.0 | 8.04 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |
| AT5G04470 | SIM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.34 | ||||
| AT5G04470 | SIM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.34' | ||||
| AT5G04470 | SIM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.34' | ||||
| AT5G04470 | SIM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.83 x 10-25 | 8.782 | 153 | 11 | 7 | 69 | 93.29% | 90.79% | 164 | 76 | 0.838 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.34' | |
| AT5G04470 | SIM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 9.73 x 10-21 | 22.769 | 32 | 0 | 0 | 42 | 100.00% | 100.00% | 32 | 42 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.34' | |
| AT5G04470 | SIM | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 8.19 x 10-8 | 2.939 | 23 | 0 | 17 | 57 | 100.00% | 77.03% | 23 | 74 | 1.046 | 0.0162 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.34' |
| AT5G04470 | SIM | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.34' | ||||
| AT5G04470 | SIM | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.34' | ||||
| AT5G04470 | SIM | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.34' | ||||
| AT5G04460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.124 | 99 | 35 | 185 | 394 | 73.88% | 68.05% | 134 | 579 | 0.371 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.19 | |||
| AT5G04460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 5.95 x 10-6 | 1.418 | 114 | 119 | 338 | 676 | 48.93% | 66.67% | 233 | 1014 | 1.418 | 4.42 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.19' | |
| AT5G04460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.603 | 40 | 33 | 225 | 599 | 54.79% | 72.69% | 73 | 824 | 1.193 | 0.0028 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.19' | ||
| AT5G04460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.74 | 264 | 132 | 76 | 171 | 66.67% | 69.23% | 396 | 247 | 0.787 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.19' | |||
| AT5G04460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 1.05 x 10-13 | 2.247 | 198 | 22 | 135 | 257 | 90.00% | 65.56% | 220 | 392 | 2.481 | 1.27 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.19' | |
| AT5G04460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 3.32 x 10-28 | 8.588 | 129 | 3 | 45 | 149 | 97.73% | 76.80% | 132 | 194 | 3.133 | 5.36 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.19' | |
| AT5G04460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0233 | 0.0 | 304 | 114 | 375 | 767 | 72.73% | 67.16% | 418 | 1142 | 0.0834 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.19' | ||
| AT5G04460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0157 | 0.0 | 127 | 32 | 196 | 322 | 79.87% | 62.16% | 159 | 518 | 1.376 | 6.65 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.19' | |
| AT5G04460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.96 x 10-5 | 1.449 | 182 | 41 | 250 | 87 | 81.61% | 25.82% | 223 | 337 | 7.138 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.19' | |
| AT5G04440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.97 x 10-3 | 1.161 | 53 | 10 | 37 | 92 | 84.13% | 71.32% | 63 | 129 | 0.157 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .05 | ||
| AT5G04440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.101 | 92 | 36 | 70 | 169 | 71.88% | 70.71% | 128 | 239 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |||
| AT5G04440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.317 | 37 | 14 | 20 | 17 | 72.55% | 45.95% | 51 | 37 | 0.0 | 0.0212 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | ||
| AT5G04440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.203 | 158 | 52 | 26 | 55 | 75.24% | 67.90% | 210 | 81 | 0.456 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |||
| AT5G04440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 6.82 x 10-3 | 0.0 | 7 | 15 | 0 | 60 | 31.82% | 100.00% | 22 | 60 | 14.029 | 5.52 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |
| AT5G04440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.879 | 10 | 5 | 19 | 53 | 66.67% | 73.61% | 15 | 72 | 0.861 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' |