| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G16000 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 14 | 4 | 12 | 14 | 77.78% | 53.85% | 18 | 26 | 0.309 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.052' | |||
| AT1G16000 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.784 | 42 | 26 | 93 | 44 | 61.76% | 32.12% | 68 | 137 | 1.472 | 5.2 x 10-4 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-2.08' | ||
| AT1G15990 | CNGC7 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.011' | ||||
| AT1G15990 | CNGC7 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.011' | ||||
| AT1G15980 | PnsB1 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.313' | |||
| AT1G15980 | PnsB1 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.434 | 3 | 2 | 0 | 5 | 60.00% | 100.00% | 5 | 5 | 0.459 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.394' | ||
| AT1G15970 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.923 | 14 | 6 | 10 | 6 | 70.00% | 37.50% | 20 | 16 | 0.185 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||
| AT1G15970 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.312 | 11 | 8 | 12 | 12 | 57.89% | 50.00% | 19 | 24 | 0.865 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||
| AT1G15960 | NRAMP6 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 3.55 x 10-3 | 0.0 | 4 | 0 | 0 | 9 | 100.00% | 100.00% | 4 | 9 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '3.223' | |
| AT1G15960 | NRAMP6 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '3.219' | ||||
| AT1G15950 | CCR1 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.233 | 159 | 117 | 170 | 182 | 57.61% | 51.70% | 276 | 352 | 0.347 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.27' | ||
| AT1G15950 | CCR1 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.4 x 10-5 | 1.859 | 41 | 5 | 3 | 21 | 89.13% | 87.50% | 46 | 24 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '2.277' | |
| AT1G15940 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.771 | 2 | 0 | 1 | 1 | 100.00% | 50.00% | 2 | 2 | 0.794 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-1.421' | |||
| AT1G15940 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 2 | 1 | 2 | 1 | 66.67% | 33.33% | 3 | 3 | 0.849 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-1.112' | |||
| AT1G15930 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.586 | 408 | 436 | 456 | 554 | 48.34% | 54.85% | 844 | 1010 | 1.002 | 0.0296 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-2.069' | ||
| AT1G15930 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.588 | 157 | 79 | 97 | 230 | 66.53% | 70.34% | 236 | 327 | 0.616 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.699' | |||
| AT1G15920 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.321 | 40 | 24 | 15 | 62 | 62.50% | 80.52% | 64 | 77 | 0.0847 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.329' | |||
| AT1G15920 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.615 | 26 | 31 | 26 | 50 | 45.61% | 65.79% | 57 | 76 | 0.0844 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.379' | |||
| AT1G15910 | FDM1 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.956 | 176 | 86 | 217 | 100 | 67.18% | 31.55% | 262 | 317 | 2.711 | 2.42 x 10-16 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-2.518' | |
| AT1G15910 | FDM1 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.546 | 172 | 34 | 109 | 66 | 83.50% | 37.71% | 206 | 175 | 4.274 | 5.7 x 10-19 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-1.306' | |
| AT1G15900 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.496 | 0 | 3 | 5 | 16 | 0.00% | 76.19% | 3 | 21 | 0.0513 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '0' | |||
| AT1G15900 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.864 | 10 | 5 | 11 | 9 | 66.67% | 45.00% | 15 | 20 | 0.459 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.008' | |||
| AT1G15890 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.727 | 13 | 2 | 10 | 4 | 86.67% | 28.57% | 15 | 14 | 1.361 | 0.0122 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.004' | ||
| AT1G15890 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.745 | 5 | 2 | 0 | 1 | 71.43% | 100.00% | 7 | 1 | 0.881 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.013' | |||
| AT1G15885 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G15885 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | 0.319 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||
| AT1G15880 | GOS11 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 168 | 59 | 201 | 73 | 74.01% | 26.64% | 227 | 274 | 4.467 | 2.84 x 10-25 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.829' | |
| AT1G15880 | GOS11 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.55 | 340 | 69 | 213 | 203 | 83.13% | 48.80% | 409 | 416 | 3.297 | 4.2 x 10-24 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.037' | |
| AT1G15870 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 9 | 11 | 8 | 40 | 45.00% | 83.33% | 20 | 48 | 1.238 | 0.0104 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.059' | ||
| AT1G15870 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.924 | 14 | 27 | 38 | 62 | 34.15% | 62.00% | 41 | 100 | 1.117 | 0.016 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.079' | ||
| AT1G15860 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.52 | 26 | 19 | 26 | 35 | 57.78% | 57.38% | 45 | 61 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '1.093' | |||
| AT1G15860 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 5.07 x 10-3 | 1.09 | 58 | 20 | 23 | 90 | 74.36% | 79.65% | 78 | 113 | 0.675 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.84' | ||
| AT1G15850 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '0' | |||||
| AT1G15850 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '0' | |||||
| AT1G15840 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.855 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.143' | |||
| AT1G15840 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.097' | |||||
| AT1G15830 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 8 | 9 | 3 | 13 | 47.06% | 81.25% | 17 | 16 | 0.157 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.032' | |||
| AT1G15830 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.96 | 11 | 15 | 14 | 16 | 42.31% | 53.33% | 26 | 30 | 0.658 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-1.069' | |||
| AT1G15825 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.341 | 16 | 12 | 7 | 17 | 57.14% | 70.83% | 28 | 24 | 0.572 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||
| AT1G15825 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.432 | 3 | 2 | 0 | 4 | 60.00% | 100.00% | 5 | 4 | 0.449 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||
| AT1G15820 | LHCB6 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.84 | 909 | 71 | 540 | 180 | 92.76% | 25.00% | 980 | 720 | 25.505 | 0.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-1.087' | |
| AT1G15820 | LHCB6 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.995 | 1146 | 176 | 1170 | 184 | 86.69% | 13.59% | 1322 | 1354 | 30.253 | 0.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-2.536' | |
| AT1G15810 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.883 | 37 | 38 | 56 | 68 | 49.33% | 54.84% | 75 | 124 | 0.698 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.355' | |||
| AT1G15810 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0646 | 42 | 18 | 17 | 69 | 70.00% | 80.23% | 60 | 86 | 0.39 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.567' | |||
| AT1G15800 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.167 | 6 | 8 | 3 | 2 | 42.86% | 40.00% | 14 | 5 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||
| AT1G15800 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.642 | 15 | 12 | 7 | 12 | 55.56% | 63.16% | 27 | 19 | 0.821 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||
| AT1G15790 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '0' | |||||
| AT1G15790 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-3.401' | |||||
| AT1G15780 | NRB4 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.944 | 31 | 22 | 14 | 45 | 58.49% | 76.27% | 53 | 59 | 0.176 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.303' | ||
| AT1G15780 | NRB4 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.138 | 28 | 14 | 27 | 40 | 66.67% | 59.70% | 42 | 67 | 0.716 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '1.145' | ||
| AT1G15772 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G15772 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.863 | 2 | 1 | 1 | 3 | 66.67% | 75.00% | 3 | 4 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||
| AT1G15770 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G15770 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | ||||
| AT1G15760 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.681 | 47 | 20 | 66 | 41 | 70.15% | 38.32% | 67 | 107 | 1.531 | 4.04 x 10-4 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | ||
| AT1G15760 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G15757 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G15757 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G15750 | TPL | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.1 | 99 | 56 | 114 | 118 | 63.87% | 50.86% | 155 | 232 | 0.0576 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.467' | ||
| AT1G15750 | TPL | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0039 | 1.102 | 54 | 8 | 25 | 54 | 87.10% | 68.35% | 62 | 79 | 0.051 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.154' | |
| AT1G15740 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.191 | 27 | 10 | 7 | 28 | 72.97% | 80.00% | 37 | 35 | 0.766 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.934' | |||
| AT1G15740 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.767 | 7 | 5 | 3 | 5 | 58.33% | 62.50% | 12 | 8 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '4.718' | |||
| AT1G15730 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.114 | 47 | 25 | 42 | 54 | 65.28% | 56.25% | 72 | 96 | 0.488 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-1.972' | |||
| AT1G15730 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.923 | 43 | 15 | 20 | 32 | 74.14% | 61.54% | 58 | 52 | 0.396 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.634' | |||
| AT1G15720 | TRFL5 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.814 | 91 | 40 | 59 | 91 | 69.47% | 60.67% | 131 | 150 | 0.334 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.514' | ||
| AT1G15720 | TRFL5 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.727 | 92 | 83 | 112 | 82 | 52.57% | 42.27% | 175 | 194 | 0.166 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.179' | ||
| AT1G15710 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.481 | 33 | 29 | 29 | 45 | 53.23% | 60.81% | 62 | 74 | 0.625 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.193' | |||
| AT1G15710 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 5.55 x 10-3 | 1.058 | 55 | 10 | 18 | 46 | 84.62% | 71.88% | 65 | 64 | 0.254 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.421' | ||
| AT1G15700 | ATPC2 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.441 | 6 | 1 | 4 | 11 | 85.71% | 73.33% | 7 | 15 | 0.82 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.13' | ||
| AT1G15700 | ATPC2 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.964 | 5 | 6 | 14 | 13 | 45.45% | 48.15% | 11 | 27 | 0.996 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.954' | ||
| AT1G15690 | AVP1 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.463 | 304 | 266 | 393 | 413 | 53.33% | 51.24% | 570 | 806 | 0.691 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '1.224' | ||
| AT1G15690 | AVP1 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 3.61 x 10-3 | 1.056 | 512 | 208 | 309 | 712 | 71.11% | 69.74% | 720 | 1021 | 0.794 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.417' | |
| AT1G15680 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G15680 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G15670 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.855 | 22 | 21 | 28 | 20 | 51.16% | 41.67% | 43 | 48 | 0.624 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.437' | |||
| AT1G15670 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.796 | 20 | 8 | 13 | 15 | 71.43% | 53.57% | 28 | 28 | 0.458 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.456' | |||
| AT1G15660 | CENP-C | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.944 | 223 | 97 | 157 | 283 | 69.69% | 64.32% | 320 | 440 | 0.33 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-2.546' | ||
| AT1G15660 | CENP-C | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.481 | 245 | 210 | 338 | 353 | 53.85% | 51.09% | 455 | 691 | 0.611 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-3.048' | ||
| AT1G15650 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G15650 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G15640 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.046' | |||||
| AT1G15640 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '0' | |||||
| AT1G15630 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G15630 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | ||||
| AT1G15620 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G15620 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G15610 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G15610 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | ||||
| AT1G15600 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.007' | |||||
| AT1G15600 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.007' | |||||
| AT1G15590 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.001' | |||||
| AT1G15590 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.001' | |||||
| AT1G15580 | IAA5 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.017' | ||||
| AT1G15580 | IAA5 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '0' | ||||
| AT1G15570 | CYCA2;3 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.924 | 6 | 9 | 10 | 11 | 40.00% | 52.38% | 15 | 21 | 0.727 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-3.626' | ||
| AT1G15570 | CYCA2;3 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.015' | |||
| AT1G15560 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.023' | |||||
| AT1G15560 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.002' | ||||
| AT1G15550 | GA3OX1 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.036' | ||||
| AT1G15550 | GA3OX1 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.036' |