| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G62270 | GCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.704 | 49 | 33 | 37 | 84 | 59.76% | 69.42% | 82 | 121 | 0.284 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G62270 | GCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.85 x 10-8 | 1.46 | 364 | 93 | 96 | 228 | 79.65% | 70.37% | 457 | 324 | 1.035 | 0.0046 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT5G62270 | GCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.172 | 8 | 0 | 5 | 10 | 100.00% | 66.67% | 8 | 15 | 0.281 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G62270 | GCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0143 | 0.0 | 233 | 49 | 150 | 70 | 82.62% | 31.82% | 282 | 220 | 5.651 | 1.0 x 10-30 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT5G62270 | GCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.717 | 193 | 69 | 126 | 199 | 73.66% | 61.23% | 262 | 325 | 1.078 | 2.78 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G62270 | GCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.154 | 113 | 34 | 79 | 142 | 76.87% | 64.25% | 147 | 221 | 0.0 | 0.0297 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G62270 | GCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.633 | 98 | 27 | 34 | 46 | 78.40% | 57.50% | 125 | 80 | 1.132 | 2.94 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G62270 | GCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 7.11 x 10-4 | 1.121 | 228 | 44 | 74 | 118 | 83.82% | 61.46% | 272 | 192 | 1.764 | 1.26 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT5G62260 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.232 | 163 | 47 | 155 | 239 | 77.62% | 60.66% | 210 | 394 | 1.331 | 1.36 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -2.59 | ||
| AT5G62260 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.21 x 10-4 | 1.133 | 269 | 72 | 261 | 477 | 78.89% | 64.63% | 341 | 738 | 1.357 | 9.78 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.59' | |
| AT5G62260 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.252 | 24 | 23 | 92 | 227 | 51.06% | 71.16% | 47 | 319 | 1.056 | 0.0104 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.59' | ||
| AT5G62260 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.229 | 279 | 132 | 79 | 108 | 67.88% | 57.75% | 411 | 187 | 0.0689 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.59' | |||
| AT5G62260 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.35 x 10-6 | 1.618 | 208 | 76 | 131 | 68 | 73.24% | 34.17% | 284 | 199 | 3.03 | 6.64 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.59' | |
| AT5G62260 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0227 | 0.0 | 159 | 40 | 36 | 68 | 79.90% | 65.38% | 199 | 104 | 0.0 | 0.0129 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.59' | |
| AT5G62260 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.638 | 520 | 228 | 338 | 641 | 69.52% | 65.47% | 748 | 979 | 0.16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.59' | |||
| AT5G62260 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.07 x 10-9 | 1.81 | 169 | 37 | 53 | 163 | 82.04% | 75.46% | 206 | 216 | 0.16 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.59' | ||
| AT5G62260 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.87 x 10-8 | 1.519 | 210 | 46 | 122 | 276 | 82.03% | 69.35% | 256 | 398 | 1.187 | 4.4 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.59' | |
| AT5G62250 | MAP65-9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .02 | ||||
| AT5G62250 | MAP65-9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | ||||
| AT5G62250 | MAP65-9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | ||||
| AT5G62250 | MAP65-9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | ||||
| AT5G62250 | MAP65-9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | ||||
| AT5G62250 | MAP65-9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | ||||
| AT5G62250 | MAP65-9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | ||||
| AT5G62250 | MAP65-9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | ||||
| AT5G62250 | MAP65-9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | ||||
| AT5G62240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 2 | 3 | 60.00% | 0 | 5 | 1.0 | TAIR10 | |||||
| AT5G62240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 0.121 | 3 | 3 | 6 | 0 | 50.00% | 0.00% | 6 | 6 | 0.29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G62240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G62240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.84 | 7 | 3 | 3 | 1 | 70.00% | 25.00% | 10 | 4 | 0.466 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G62240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 58 | 13 | 0 | 0 | 81.69% | 71 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G62240 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | no data | 5.39 x 10-3 | 0.0 | 37 | 0 | 19 | 12 | 100.00% | 38.71% | 37 | 31 | 7.514 | 1.41 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G62240 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.0155 | 0.0 | 3 | 0 | 0 | 9 | 100.00% | 100.00% | 3 | 9 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G62240 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 20 | 100.00% | 0 | 20 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G62240 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 18 | 100.00% | 0 | 18 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G62230 | ERL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 1 | 0 | 4 | 3 | 100.00% | 42.86% | 1 | 7 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .35 | ||
| AT5G62230 | ERL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 0.635 | 4 | 0 | 4 | 3 | 100.00% | 42.86% | 4 | 7 | 0.306 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.35' | ||
| AT5G62230 | ERL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.35' | ||||
| AT5G62230 | ERL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.604 | 111 | 52 | 33 | 80 | 68.10% | 70.80% | 163 | 113 | 0.919 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.35' | ||
| AT5G62230 | ERL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 18 | 21 | 0 | 0 | 46.15% | 39 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.35' | |||
| AT5G62230 | ERL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | PEG | not imprinted | 1.57 x 10-3 | 4.576 | 12 | 14 | 8 | 0 | 46.15% | 0.00% | 26 | 8 | 0.0 | 0.046 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.35' |
| AT5G62230 | ERL1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 4.21 x 10-5 | 1.411 | 135 | 20 | 42 | 81 | 87.10% | 65.85% | 155 | 123 | 1.517 | 1.53 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.35' |
| AT5G62230 | ERL1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 45 | 0 | 0 | 0 | 100.00% | 45 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.35' | |||
| AT5G62230 | ERL1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 15 | 100.00% | 0 | 15 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.35' | |||
| AT5G62220 | GT18 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.4 x 10-6 | 1.284 | 404 | 101 | 310 | 568 | 80.00% | 64.69% | 505 | 878 | 1.529 | 9.61 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.89 |
| AT5G62220 | GT18 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.12 x 10-4 | 1.135 | 414 | 148 | 444 | 972 | 73.67% | 68.64% | 562 | 1416 | 0.0638 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | |
| AT5G62220 | GT18 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0245 | 0.0 | 409 | 89 | 387 | 450 | 82.13% | 53.76% | 498 | 837 | 2.745 | 4.28 x 10-26 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' |
| AT5G62220 | GT18 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.33 x 10-3 | 1.09 | 374 | 155 | 74 | 210 | 70.70% | 73.94% | 529 | 284 | 0.61 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | |
| AT5G62220 | GT18 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | paternally biased | not imprinted | 5.06 x 10-17 | 5.314 | 145 | 68 | 130 | 22 | 68.08% | 14.47% | 213 | 152 | 6.041 | 1.29 x 10-24 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' |
| AT5G62220 | GT18 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.42 x 10-6 | 1.688 | 157 | 56 | 123 | 56 | 73.71% | 31.28% | 213 | 179 | 3.317 | 1.51 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' |
| AT5G62220 | GT18 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.86 x 10-3 | 1.032 | 1625 | 508 | 579 | 916 | 76.18% | 61.27% | 2133 | 1495 | 1.649 | 8.12 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' |
| AT5G62220 | GT18 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.35 x 10-7 | 1.344 | 433 | 233 | 253 | 292 | 65.02% | 53.58% | 666 | 545 | 1.161 | 1.19 x 10-4 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' |
| AT5G62220 | GT18 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.26 x 10-3 | 1.008 | 1080 | 108 | 1008 | 288 | 90.91% | 22.22% | 1188 | 1296 | 25.204 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' |
| AT5G62210 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.35 x 10-9 | 4.16 | 41 | 1 | 3 | 22 | 97.62% | 88.00% | 42 | 25 | 0.269 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.84 | ||
| AT5G62210 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 228.129 | 652 | 1 | 2 | 59 | 99.85% | 96.72% | 653 | 61 | 1.049 | 0.0465 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.84' | |
| AT5G62210 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.51 x 10-27 | 52.45 | 129 | 0 | 0 | 24 | 100.00% | 100.00% | 129 | 24 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.84' | ||
| AT5G62210 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 806.854 | 484 | 1 | 1 | 215 | 99.79% | 99.54% | 485 | 216 | 0.766 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.84' | ||
| AT5G62210 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0 | 764.8 | 216 | 0 | 0 | 209 | 100.00% | 100.00% | 216 | 209 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.84' | ||
| AT5G62210 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0 | 9.164 | 100 | 7 | 19 | 165 | 93.46% | 89.67% | 107 | 184 | 0.483 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.84' | ||
| AT5G62210 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 207.489 | 236 | 2 | 0 | 99 | 99.16% | 100.00% | 238 | 99 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.84' | ||
| AT5G62210 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 1110.993 | 443 | 0 | 1 | 219 | 100.00% | 99.55% | 443 | 220 | 0.405 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.84' | ||
| AT5G62210 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.51 x 10-24 | 64.784 | 239 | 0 | 0 | 16 | 100.00% | 100.00% | 239 | 16 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.84' | ||
| AT5G62200 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.154 | 173 | 95 | 236 | 391 | 64.55% | 62.36% | 268 | 627 | 0.737 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.25 | |||
| AT5G62200 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.64 | 189 | 78 | 401 | 736 | 70.79% | 64.73% | 267 | 1137 | 0.121 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |||
| AT5G62200 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.27 x 10-3 | 1.141 | 198 | 49 | 130 | 61 | 80.16% | 31.94% | 247 | 191 | 4.658 | 7.24 x 10-24 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT5G62200 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.749 | 689 | 323 | 208 | 421 | 68.08% | 66.93% | 1012 | 629 | 0.862 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |||
| AT5G62200 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0269 | 0.0 | 102 | 80 | 50 | 91 | 56.04% | 64.54% | 182 | 141 | 0.178 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | ||
| AT5G62200 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 6.38 x 10-3 | 1.001 | 208 | 35 | 64 | 85 | 85.60% | 57.05% | 243 | 149 | 2.269 | 1.86 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT5G62200 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.746 | 66 | 60 | 36 | 151 | 52.38% | 80.75% | 126 | 187 | 1.876 | 6.5 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | ||
| AT5G62200 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.11 x 10-4 | 1.274 | 29 | 0 | 22 | 26 | 100.00% | 54.17% | 29 | 48 | 3.647 | 7.54 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT5G62200 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0353 | 0.0 | 17 | 16 | 10 | 112 | 51.52% | 91.80% | 33 | 122 | 2.855 | 1.1 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT5G62190 | PRH75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0216 | 0.0 | 443 | 158 | 353 | 671 | 73.71% | 65.53% | 601 | 1024 | 1.082 | 2.28 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.13 |
| AT5G62190 | PRH75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.128 | 650 | 306 | 995 | 2153 | 67.99% | 68.39% | 956 | 3148 | 0.935 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | ||
| AT5G62190 | PRH75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.478 | 752 | 483 | 402 | 1103 | 60.89% | 73.29% | 1235 | 1505 | 1.403 | 2.04 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |
| AT5G62190 | PRH75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 1034 | 533 | 427 | 866 | 65.99% | 66.98% | 1567 | 1293 | 0.844 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | ||
| AT5G62190 | PRH75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.424 | 930 | 446 | 659 | 1183 | 67.59% | 64.22% | 1376 | 1842 | 0.0698 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | ||
| AT5G62190 | PRH75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.159 | 656 | 476 | 187 | 631 | 57.95% | 77.14% | 1132 | 818 | 1.849 | 3.32 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |
| AT5G62190 | PRH75 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0435 | 0.0 | 1924 | 849 | 1368 | 2722 | 69.38% | 66.55% | 2773 | 4090 | 0.0 | 0.0374 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' |
| AT5G62190 | PRH75 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.132 | 695 | 505 | 216 | 730 | 57.92% | 77.17% | 1200 | 946 | 1.882 | 2.32 x 10-20 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |
| AT5G62190 | PRH75 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.452 | 554 | 198 | 385 | 501 | 73.67% | 56.55% | 752 | 886 | 1.601 | 9.69 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.13' | |
| AT5G62180 | CXE20 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 7.31 x 10-3 | 1.05 | 44 | 12 | 17 | 62 | 78.57% | 78.48% | 56 | 79 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .19 | |
| AT5G62180 | CXE20 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 5.37 x 10-6 | 1.621 | 83 | 17 | 23 | 81 | 83.00% | 77.88% | 100 | 104 | 0.523 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |
| AT5G62180 | CXE20 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 3 | 21 | 87.50% | 0 | 24 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||
| AT5G62180 | CXE20 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.3 x 10-4 | 1.365 | 133 | 35 | 23 | 76 | 79.17% | 76.77% | 168 | 99 | 0.881 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |
| AT5G62180 | CXE20 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 11 | 47 | 0 | 1 | 18.97% | 100.00% | 58 | 1 | 0.257 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | ||
| AT5G62180 | CXE20 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0136 | 0.0 | 8 | 21 | 0 | 45 | 27.59% | 100.00% | 29 | 45 | 13.909 | 1.23 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' |
| AT5G62180 | CXE20 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | maternally biased | not imprinted | 2.61 x 10-10 | 2.225 | 101 | 26 | 28 | 147 | 79.53% | 84.00% | 127 | 175 | 0.534 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |
| AT5G62180 | CXE20 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 2.66 x 10-9 | 4.445 | 25 | 0 | 2 | 21 | 100.00% | 91.30% | 25 | 23 | 0.282 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |
| AT5G62180 | CXE20 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 42 | 0 | 0 | 0 | 100.00% | 42 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||
| AT5G62170 | TRM25 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.48 | 27 | 9 | 52 | 103 | 75.00% | 66.45% | 36 | 155 | 0.619 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.08 | ||
| AT5G62170 | TRM25 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.981 | 35 | 15 | 114 | 213 | 70.00% | 65.14% | 50 | 327 | 0.67 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | ||
| AT5G62170 | TRM25 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 30 | 106 | 77.94% | 0 | 136 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | |||
| AT5G62170 | TRM25 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.771 | 33 | 17 | 8 | 23 | 66.00% | 74.19% | 50 | 31 | 0.715 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | ||
| AT5G62170 | TRM25 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.226 | 23 | 31 | 0 | 7 | 42.59% | 100.00% | 54 | 7 | 1.441 | 7.28 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | |
| AT5G62170 | TRM25 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 0 | 10 | 0 | 15 | 0.00% | 100.00% | 10 | 15 | 10.165 | 8.47 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | |
| AT5G62170 | TRM25 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.191 | 140 | 48 | 131 | 244 | 74.47% | 65.07% | 188 | 375 | 0.0651 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | ||
| AT5G62170 | TRM25 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 0.0 | 20.568 | 110 | 0 | 28 | 121 | 100.00% | 81.21% | 110 | 149 | 4.406 | 1.62 x 10-7 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' |
| AT5G62170 | TRM25 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | PEG | not imprinted | 2.84 x 10-10 | 30.668 | 0 | 13 | 137 | 43 | 0.00% | 23.89% | 13 | 180 | 0.0888 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | |
| AT5G62165 | AGL42 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .17 | ||||
| AT5G62165 | AGL42 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' |