| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G13130 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | |||||
| AT5G13120 | Pnsl5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.6 | 123 | 41 | 113 | 182 | 75.00% | 61.69% | 164 | 295 | 1.037 | 0.0124 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.22 | |
| AT5G13120 | Pnsl5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.183 | 181 | 69 | 304 | 586 | 72.40% | 65.84% | 250 | 890 | 0.111 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.22' | ||
| AT5G13120 | Pnsl5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 0.0 | 14.126 | 278 | 8 | 35 | 163 | 97.20% | 82.32% | 286 | 198 | 2.605 | 4.32 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.22' |
| AT5G13120 | Pnsl5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.206 | 275 | 83 | 95 | 157 | 76.82% | 62.30% | 358 | 252 | 1.217 | 7.92 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.22' | |
| AT5G13120 | Pnsl5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 3.92 x 10-7 | 1.641 | 150 | 41 | 27 | 104 | 78.53% | 79.39% | 191 | 131 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.22' | |
| AT5G13120 | Pnsl5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 1.46 x 10-11 | 2.574 | 92 | 27 | 20 | 147 | 77.31% | 88.02% | 119 | 167 | 0.0 | 0.0351 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.22' |
| AT5G13120 | Pnsl5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.13 | 500 | 230 | 260 | 585 | 68.49% | 69.23% | 730 | 845 | 0.945 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.22' | ||
| AT5G13120 | Pnsl5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0466 | 0.0 | 180 | 123 | 95 | 361 | 59.41% | 79.17% | 303 | 456 | 1.649 | 1.48 x 10-8 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.22' |
| AT5G13120 | Pnsl5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.76 x 10-7 | 1.655 | 579 | 10 | 350 | 93 | 98.30% | 20.99% | 589 | 443 | 93.74 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.22' |
| AT5G13110 | G6PD2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.341 | 3 | 0 | 1 | 5 | 100.00% | 83.33% | 3 | 6 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.84 | ||
| AT5G13110 | G6PD2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 0.249 | 6 | 0 | 13 | 16 | 100.00% | 55.17% | 6 | 29 | 0.124 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.84' | ||
| AT5G13110 | G6PD2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 7 | 12 | 63.16% | 0 | 19 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.84' | |||
| AT5G13110 | G6PD2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.84' | ||||
| AT5G13110 | G6PD2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.84' | ||||
| AT5G13110 | G6PD2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.84' | ||||
| AT5G13110 | G6PD2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.332 | 12 | 4 | 4 | 16 | 75.00% | 80.00% | 16 | 20 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.84' | ||
| AT5G13110 | G6PD2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 3.05 x 10-19 | 19.567 | 35 | 0 | 0 | 33 | 100.00% | 100.00% | 35 | 33 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.84' | |
| AT5G13110 | G6PD2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 33 | 0 | 10 | 0 | 100.00% | 0.00% | 33 | 10 | 22.363 | 8.88 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.84' | |
| AT5G13100 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.63 | 182 | 48 | 102 | 89 | 79.13% | 46.60% | 230 | 191 | 2.385 | 4.02 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .68 | ||
| AT5G13100 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.3 | 212 | 70 | 170 | 179 | 75.18% | 51.29% | 282 | 349 | 1.782 | 6.09 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | ||
| AT5G13100 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.45 x 10-12 | 4.289 | 189 | 0 | 139 | 65 | 100.00% | 31.86% | 189 | 204 | 78.455 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |
| AT5G13100 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |||||
| AT5G13100 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |||||
| AT5G13100 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |||||
| AT5G13100 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0463 | 0.0 | 377 | 73 | 327 | 350 | 83.78% | 51.70% | 450 | 677 | 3.232 | 1.13 x 10-28 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |
| AT5G13100 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 2.58 x 10-11 | 3.895 | 95 | 0 | 115 | 95 | 100.00% | 45.24% | 95 | 210 | 22.832 | 1.27 x 10-24 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |
| AT5G13100 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.63 x 10-5 | 1.457 | 351 | 0 | 363 | 33 | 100.00% | 8.33% | 351 | 396 | 705.094 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |
| AT5G13090 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.819 | 76 | 46 | 111 | 304 | 62.30% | 73.25% | 122 | 415 | 0.0598 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .17 | |||
| AT5G13090 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.825 | 45 | 32 | 90 | 224 | 58.44% | 71.34% | 77 | 314 | 0.0809 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||
| AT5G13090 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.482 | 31 | 16 | 53 | 145 | 65.96% | 73.23% | 47 | 198 | 0.431 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||
| AT5G13090 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.872 | 79 | 21 | 8 | 13 | 79.00% | 61.90% | 100 | 21 | 0.337 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||
| AT5G13090 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | paternally biased | not imprinted | 5.37 x 10-6 | 6.989 | 99 | 31 | 32 | 0 | 76.15% | 0.00% | 130 | 32 | 17.82 | 5.84 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |
| AT5G13090 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 1.15 x 10-14 | 12.096 | 34 | 0 | 0 | 21 | 100.00% | 100.00% | 34 | 21 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | ||
| AT5G13090 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.278 | 66 | 19 | 125 | 213 | 77.65% | 63.02% | 85 | 338 | 0.0 | 0.0284 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | ||
| AT5G13090 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 11 | 153 | 93.29% | 0 | 164 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | ||||
| AT5G13090 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.12 x 10-3 | 1.045 | 54 | 0 | 37 | 19 | 100.00% | 33.93% | 54 | 56 | 15.851 | 3.8 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |
| AT5G13080 | WRKY75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.67 | ||||
| AT5G13080 | WRKY75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.67' | ||||
| AT5G13080 | WRKY75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.67' | ||||
| AT5G13080 | WRKY75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.67' | ||||
| AT5G13080 | WRKY75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.67' | ||||
| AT5G13080 | WRKY75 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.67' | ||||
| AT5G13080 | WRKY75 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.67' | ||||
| AT5G13080 | WRKY75 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.67' | ||||
| AT5G13080 | WRKY75 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.67' | ||||
| AT5G13070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 6.7 x 10-4 | 1.265 | 85 | 79 | 115 | 198 | 51.83% | 63.26% | 164 | 313 | 0.0 | 0.0488 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.33 | |
| AT5G13070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.616 | 89 | 50 | 96 | 186 | 64.03% | 65.96% | 139 | 282 | 0.874 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | |||
| AT5G13070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.34 x 10-5 | 1.378 | 108 | 17 | 74 | 141 | 86.40% | 65.58% | 125 | 215 | 1.519 | 4.41 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | |
| AT5G13070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.999 | 222 | 85 | 79 | 113 | 72.31% | 58.85% | 307 | 192 | 1.069 | 0.0104 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||
| AT5G13070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.429 | 286 | 166 | 100 | 266 | 63.27% | 72.68% | 452 | 366 | 1.014 | 6.87 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||
| AT5G13070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 1.54 x 10-10 | 2.454 | 80 | 116 | 10 | 351 | 40.82% | 97.23% | 196 | 361 | 20.64 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | |
| AT5G13070 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.48 x 10-3 | 1.056 | 280 | 125 | 126 | 359 | 69.14% | 74.02% | 405 | 485 | 0.222 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||
| AT5G13070 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.112 | 348 | 75 | 110 | 127 | 82.27% | 53.59% | 423 | 237 | 2.429 | 4.81 x 10-14 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||
| AT5G13070 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0146 | 0.0 | 314 | 67 | 159 | 81 | 82.41% | 33.75% | 381 | 240 | 5.416 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | |
| AT5G13060 | ABAP1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.4 | 4 | 0 | 3 | 5 | 100.00% | 62.50% | 4 | 8 | 0.682 | TAIR10 | |||
| AT5G13060 | ABAP1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 0.628 | 0 | 2 | 10 | 18 | 0.00% | 64.29% | 2 | 28 | 0.251 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G13060 | ABAP1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 13 | 4 | 23.53% | 0 | 17 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G13060 | ABAP1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.895 | 37 | 16 | 13 | 17 | 69.81% | 56.67% | 53 | 30 | 0.461 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G13060 | ABAP1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 92 | 48 | 38 | 76 | 65.71% | 66.67% | 140 | 114 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G13060 | ABAP1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 9.85 x 10-5 | 1.436 | 18 | 16 | 0 | 38 | 52.94% | 100.00% | 34 | 38 | 4.539 | 1.44 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT5G13060 | ABAP1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.42 | 74 | 26 | 100 | 186 | 74.00% | 65.03% | 100 | 286 | 0.209 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G13060 | ABAP1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.48 x 10-3 | 0.0 | 57 | 0 | 47 | 19 | 100.00% | 28.79% | 57 | 66 | 21.675 | 4.17 x 10-18 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT5G13060 | ABAP1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 3.99 x 10-13 | 6.086 | 63 | 0 | 14 | 38 | 100.00% | 73.08% | 63 | 52 | 3.304 | 7.17 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT5G13050 | 5-FCL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.691 | 3 | 1 | 2 | 0 | 75.00% | 0.00% | 4 | 2 | 0.589 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.27 | ||
| AT5G13050 | 5-FCL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 1.0 | 5 | 2 | 18 | 22 | 71.43% | 55.00% | 7 | 40 | 0.815 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.27' | ||
| AT5G13050 | 5-FCL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.27' | ||||
| AT5G13050 | 5-FCL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.27' | ||||
| AT5G13050 | 5-FCL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.27' | ||||
| AT5G13050 | 5-FCL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.27' | ||||
| AT5G13050 | 5-FCL | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 1.0 | 27 | 10 | 22 | 31 | 72.97% | 58.49% | 37 | 53 | 0.323 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.27' | ||
| AT5G13050 | 5-FCL | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.27' | ||||
| AT5G13050 | 5-FCL | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 22 | 0 | 0.00% | 0 | 22 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.27' | |||
| AT5G13030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.163 | 94 | 19 | 78 | 106 | 83.19% | 57.61% | 113 | 184 | 1.67 | 2.05 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.68 | ||
| AT5G13030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 31 | 16 | 169 | 348 | 65.96% | 67.31% | 47 | 517 | 0.989 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | |||
| AT5G13030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0225 | 0.0 | 104 | 45 | 70 | 67 | 69.80% | 48.91% | 149 | 137 | 1.222 | 7.31 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | |
| AT5G13030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0128 | 1.012 | 136 | 61 | 27 | 101 | 69.04% | 78.91% | 197 | 128 | 0.153 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | ||
| AT5G13030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 3.56 x 10-3 | 1.011 | 82 | 51 | 20 | 114 | 61.65% | 85.07% | 133 | 134 | 1.564 | 3.07 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | |
| AT5G13030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | ||||
| AT5G13030 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.679 | 562 | 259 | 440 | 869 | 68.45% | 66.39% | 821 | 1309 | 0.512 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | |||
| AT5G13030 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0632 | 282 | 114 | 76 | 81 | 71.21% | 51.59% | 396 | 157 | 1.368 | 3.71 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | ||
| AT5G13030 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.888 | 187 | 13 | 180 | 54 | 93.50% | 23.08% | 200 | 234 | 20.331 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | ||
| AT5G13020 | EML3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.5 | 43 | 9 | 45 | 58 | 82.69% | 56.31% | 52 | 103 | 1.245 | 4.36 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .3 | |
| AT5G13020 | EML3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.52 x 10-5 | 1.478 | 71 | 56 | 86 | 97 | 55.91% | 53.01% | 127 | 183 | 0.78 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |
| AT5G13020 | EML3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 5.38 x 10-9 | 3.054 | 73 | 0 | 62 | 57 | 100.00% | 47.90% | 73 | 119 | 14.454 | 1.2 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' |
| AT5G13020 | EML3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | ||||
| AT5G13020 | EML3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | ||||
| AT5G13020 | EML3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | ||||
| AT5G13020 | EML3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 3.97 x 10-3 | 1.047 | 202 | 71 | 93 | 228 | 73.99% | 71.03% | 273 | 321 | 0.641 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |
| AT5G13020 | EML3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 31 | 67 | 68.37% | 0 | 98 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |||
| AT5G13020 | EML3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | PEG | not imprinted | 2.87 x 10-14 | 9.927 | 12 | 23 | 121 | 32 | 34.29% | 20.92% | 35 | 153 | 0.137 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |
| AT5G13010 | EMB3011 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 94 | 36 | 85 | 122 | 72.31% | 58.94% | 130 | 207 | 0.0 | 0.0392 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .15 | |
| AT5G13010 | EMB3011 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.498 | 245 | 71 | 120 | 165 | 77.53% | 57.89% | 316 | 285 | 1.525 | 1.79 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |
| AT5G13010 | EMB3011 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 4.85 x 10-7 | 2.799 | 14 | 34 | 75 | 105 | 29.17% | 58.33% | 48 | 180 | 1.371 | 5.71 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' |
| AT5G13010 | EMB3011 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.361 | 146 | 46 | 30 | 55 | 76.04% | 64.71% | 192 | 85 | 0.159 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | ||
| AT5G13010 | EMB3011 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 5.78 x 10-5 | 1.48 | 70 | 8 | 11 | 30 | 89.74% | 73.17% | 78 | 41 | 0.0 | 0.0462 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' |
| AT5G13010 | EMB3011 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.029 | 1.11 | 21 | 7 | 15 | 2 | 75.00% | 11.76% | 28 | 17 | 2.499 | 9.95 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' |
| AT5G13010 | EMB3011 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0484 | 0.0 | 251 | 58 | 137 | 190 | 81.23% | 58.10% | 309 | 327 | 1.885 | 1.51 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' |
| AT5G13010 | EMB3011 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.582 | 107 | 82 | 41 | 106 | 56.61% | 72.11% | 189 | 147 | 1.039 | 0.0068 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |
| AT5G13010 | EMB3011 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.25 x 10-11 | 4.247 | 144 | 0 | 83 | 53 | 100.00% | 38.97% | 144 | 136 | 41.661 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' |