| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G13430 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 11 | 0 | 11 | 0 | 100.00% | 0.00% | 11 | 11 | 8.2 | 7.05 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.15' | ||
| AT5G13430 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 5 | 0 | 1 | 0 | 100.00% | 0.00% | 5 | 1 | 0.297 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.15' | |||
| AT5G13430 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.15' | |||||
| AT5G13430 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.15' | |||||
| AT5G13420 | TRA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.184 | 131 | 31 | 57 | 84 | 80.86% | 59.57% | 162 | 141 | 1.391 | 3.27 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.2 | |
| AT5G13420 | TRA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.226 | 158 | 59 | 297 | 562 | 72.81% | 65.42% | 217 | 859 | 0.0888 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | ||
| AT5G13420 | TRA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 9.76 x 10-13 | 1.641 | 740 | 609 | 193 | 290 | 54.86% | 60.04% | 1349 | 483 | 0.0719 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | |
| AT5G13420 | TRA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 9.39 x 10-3 | 1.04 | 1106 | 160 | 259 | 220 | 87.36% | 45.93% | 1266 | 479 | 5.763 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' |
| AT5G13420 | TRA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 8.95 x 10-14 | 1.813 | 838 | 84 | 238 | 258 | 90.89% | 52.02% | 922 | 496 | 6.17 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' |
| AT5G13420 | TRA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 7.31 x 10-17 | 1.874 | 997 | 123 | 252 | 331 | 89.02% | 56.78% | 1120 | 583 | 4.346 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' |
| AT5G13420 | TRA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.08 x 10-8 | 1.374 | 408 | 342 | 137 | 872 | 54.40% | 86.42% | 750 | 1009 | 3.861 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' |
| AT5G13420 | TRA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0386 | 0.0 | 377 | 413 | 133 | 742 | 47.72% | 84.80% | 790 | 875 | 4.421 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' |
| AT5G13420 | TRA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.67 x 10-14 | 1.499 | 935 | 465 | 557 | 589 | 66.79% | 51.40% | 1400 | 1146 | 1.515 | 7.9 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' |
| AT5G13410 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.32 | 6 | 0 | 15 | 19 | 100.00% | 55.88% | 6 | 34 | 0.146 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .23 | |||
| AT5G13410 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.389 | 18 | 4 | 64 | 110 | 81.82% | 63.22% | 22 | 174 | 0.177 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |||
| AT5G13410 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.967 | 133 | 70 | 43 | 88 | 65.52% | 67.18% | 203 | 131 | 0.894 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |||
| AT5G13410 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 123 | 58 | 31 | 63 | 67.96% | 67.02% | 181 | 94 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |||
| AT5G13410 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 6.15 x 10-26 | 10.98 | 110 | 0 | 118 | 226 | 100.00% | 65.70% | 110 | 344 | 11.973 | 8.41 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |
| AT5G13410 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.1 x 10-5 | 1.284 | 202 | 54 | 78 | 188 | 78.91% | 70.68% | 256 | 266 | 0.0517 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | ||
| AT5G13410 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |||||
| AT5G13410 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |||||
| AT5G13410 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |||||
| AT5G13400 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 7.83 x 10-8 | 3.013 | 29 | 9 | 3 | 70 | 76.32% | 95.89% | 38 | 73 | 1.161 | 0.0095 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 3.15 | |
| AT5G13400 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 318.196 | 158 | 0 | 1 | 176 | 100.00% | 99.44% | 158 | 177 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.15' | ||
| AT5G13400 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.98 x 10-26 | 38.626 | 76 | 0 | 0 | 30 | 100.00% | 100.00% | 76 | 30 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.15' | ||
| AT5G13400 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 177.912 | 336 | 3 | 1 | 107 | 99.12% | 99.07% | 339 | 108 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.15' | ||
| AT5G13400 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0 | 533.991 | 160 | 0 | 0 | 197 | 100.00% | 100.00% | 160 | 197 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.15' | ||
| AT5G13400 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0 | 130.448 | 175 | 0 | 0 | 44 | 100.00% | 100.00% | 175 | 44 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.15' | ||
| AT5G13400 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 165.669 | 251 | 2 | 10 | 359 | 99.21% | 97.29% | 253 | 369 | 0.252 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.15' | ||
| AT5G13400 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 164.585 | 67 | 0 | 0 | 145 | 100.00% | 100.00% | 67 | 145 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.15' | ||
| AT5G13400 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 230.427 | 123 | 1 | 0 | 164 | 99.19% | 100.00% | 124 | 164 | 0.471 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.15' | ||
| AT5G13390 | NEF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0812 | 11 | 14 | 20 | 29 | 44.00% | 59.18% | 25 | 49 | 0.392 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.95 | ||
| AT5G13390 | NEF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.121 | 32 | 8 | 86 | 166 | 80.00% | 65.87% | 40 | 252 | 0.178 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.95' | ||
| AT5G13390 | NEF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.57 x 10-7 | 2.609 | 20 | 0 | 12 | 45 | 100.00% | 78.95% | 20 | 57 | 0.0 | 0.0403 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.95' |
| AT5G13390 | NEF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.234 | 433 | 143 | 81 | 143 | 75.17% | 63.84% | 576 | 224 | 1.082 | 7.31 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.95' | |
| AT5G13390 | NEF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 4.42 x 10-13 | 2.506 | 169 | 55 | 17 | 124 | 75.45% | 87.94% | 224 | 141 | 1.062 | 6.78 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.95' |
| AT5G13390 | NEF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.259 | 54 | 32 | 66 | 111 | 62.79% | 62.71% | 86 | 177 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.95' | ||
| AT5G13390 | NEF1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.772 | 164 | 65 | 165 | 288 | 71.62% | 63.58% | 229 | 453 | 0.0898 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.95' | ||
| AT5G13390 | NEF1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0676 | 34 | 28 | 34 | 58 | 54.84% | 63.04% | 62 | 92 | 0.392 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.95' | ||
| AT5G13390 | NEF1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.87 | 57 | 38 | 21 | 51 | 60.00% | 70.83% | 95 | 72 | 0.215 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.95' | ||
| AT5G13380 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.11 | |||||
| AT5G13380 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||||
| AT5G13380 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||||
| AT5G13380 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||||
| AT5G13380 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||||
| AT5G13380 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||||
| AT5G13380 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||||
| AT5G13380 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||||
| AT5G13380 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||||
| AT5G13370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | maternally biased | not imprinted | 9.7 x 10-9 | 2.524 | 64 | 4 | 49 | 114 | 94.12% | 69.94% | 68 | 163 | 1.865 | 1.28 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.94 | |
| AT5G13370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.319 | 25 | 8 | 80 | 171 | 75.76% | 68.13% | 33 | 251 | 0.572 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | |||
| AT5G13370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 47 | 96 | 67.13% | 0 | 143 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | ||||
| AT5G13370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 252 | 74 | 34 | 38 | 77.30% | 52.78% | 326 | 72 | 1.487 | 3.56 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | ||
| AT5G13370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 1.68 x 10-20 | 22.6 | 46 | 0 | 0 | 29 | 100.00% | 100.00% | 46 | 29 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | ||
| AT5G13370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.69 | 48 | 12 | 32 | 42 | 80.00% | 56.76% | 60 | 74 | 1.037 | 0.0092 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | ||
| AT5G13370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.914 | 5 | 26 | 13 | 308 | 16.13% | 95.95% | 31 | 321 | 28.272 | 8.52 x 10-24 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | ||
| AT5G13370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 49 | 100.00% | 0 | 49 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | ||||
| AT5G13370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 23 | 100.00% | 0 | 23 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | ||||
| AT5G13360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.998 | 131 | 33 | 69 | 74 | 79.88% | 51.75% | 164 | 143 | 1.827 | 1.56 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.94 | ||
| AT5G13360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.329 | 184 | 54 | 82 | 126 | 77.31% | 60.58% | 238 | 208 | 1.242 | 5.22 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | ||
| AT5G13360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.18 | 230 | 16 | 80 | 35 | 93.50% | 30.43% | 246 | 115 | 13.411 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | ||
| AT5G13360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.1 | 68 | 15 | 12 | 26 | 81.93% | 68.42% | 83 | 38 | 0.252 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | |||
| AT5G13360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.624 | 39 | 12 | 3 | 0 | 76.47% | 0.00% | 51 | 3 | 1.343 | 0.0266 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | ||
| AT5G13360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.14 x 10-3 | 0.0 | 61 | 31 | 0 | 11 | 66.30% | 100.00% | 92 | 11 | 0.0 | 0.0474 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | |
| AT5G13360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.152 | 351 | 88 | 102 | 141 | 79.95% | 58.02% | 439 | 243 | 1.773 | 1.04 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | ||
| AT5G13360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.71 x 10-5 | 1.628 | 146 | 47 | 69 | 25 | 75.65% | 26.60% | 193 | 94 | 3.927 | 9.52 x 10-15 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | |
| AT5G13360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 5.1 x 10-10 | 4.565 | 623 | 0 | 196 | 32 | 100.00% | 14.04% | 623 | 228 | 685.071 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.94' | |
| AT5G13350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.1 | ||||
| AT5G13350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT5G13350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT5G13350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT5G13350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT5G13350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT5G13350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | ||||
| AT5G13350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT5G13350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT5G13340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.06 x 10-4 | 1.369 | 71 | 8 | 56 | 98 | 89.87% | 63.64% | 79 | 154 | 1.788 | 5.75 x 10-5 | TAIR10 | ||
| AT5G13340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.607 | 94 | 41 | 41 | 87 | 69.63% | 67.97% | 135 | 128 | 0.916 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G13340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.42 x 10-22 | 11.891 | 85 | 0 | 21 | 73 | 100.00% | 77.66% | 85 | 94 | 3.936 | 9.66 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G13340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.489 | 119 | 41 | 31 | 59 | 74.38% | 65.56% | 160 | 90 | 0.323 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G13340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.622 | 162 | 82 | 203 | 376 | 66.39% | 64.94% | 244 | 579 | 0.854 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G13340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 8.03 x 10-3 | 0.0 | 237 | 54 | 111 | 168 | 81.44% | 60.22% | 291 | 279 | 1.701 | 7.46 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G13340 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.4 | 184 | 82 | 86 | 189 | 69.17% | 68.73% | 266 | 275 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G13340 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 7.6 x 10-4 | 1.075 | 291 | 132 | 88 | 268 | 68.79% | 75.28% | 423 | 356 | 0.0647 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G13340 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0273 | 0.0 | 354 | 147 | 182 | 217 | 70.66% | 54.39% | 501 | 399 | 1.369 | 7.75 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G13330 | Rap2.6L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.53 | ||||
| AT5G13330 | Rap2.6L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.53' | ||||
| AT5G13330 | Rap2.6L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.53' | ||||
| AT5G13330 | Rap2.6L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.53' | ||
| AT5G13330 | Rap2.6L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.53' | ||||
| AT5G13330 | Rap2.6L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.53' | ||||
| AT5G13330 | Rap2.6L | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.53' | ||||
| AT5G13330 | Rap2.6L | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.53' | ||||
| AT5G13330 | Rap2.6L | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.53' | ||||
| AT5G13320 | PBS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.09 | ||||
| AT5G13320 | PBS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' | ||||
| AT5G13320 | PBS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' | ||||
| AT5G13320 | PBS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' | ||||
| AT5G13320 | PBS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' | ||||
| AT5G13320 | PBS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' |