| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G62210 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.083' | |||||
| AT1G62210 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.002' | |||||
| AT1G62200 | PTR6 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.916 | 36 | 22 | 51 | 37 | 62.07% | 42.05% | 58 | 88 | 0.0813 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.737' | ||
| AT1G62200 | PTR6 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.0507 | 19 | 1 | 0 | 2 | 95.00% | 100.00% | 20 | 2 | 0.872 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.881' | ||
| AT1G62190 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G62190 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G62181 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G62181 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G62180 | APR2 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.074 | 1256 | 547 | 450 | 933 | 69.66% | 67.46% | 1803 | 1383 | 0.433 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.176' | ||
| AT1G62180 | APR2 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0615 | 545 | 409 | 177 | 194 | 57.13% | 52.29% | 954 | 371 | 0.3 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '1.238' | ||
| AT1G62170 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '0' | |||||
| AT1G62170 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.005' | |||||
| AT1G62160 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.034' | |||||
| AT1G62160 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '0' | |||||
| AT1G62150 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.103 | 40 | 6 | 44 | 26 | 86.96% | 37.14% | 46 | 70 | 3.032 | 9.7 x 10-7 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.429' | ||
| AT1G62150 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.366 | 18 | 1 | 12 | 9 | 94.74% | 42.86% | 19 | 21 | 1.762 | 3.66 x 10-3 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.076' | ||
| AT1G62130 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.983 | 8 | 3 | 4 | 8 | 72.73% | 66.67% | 11 | 12 | 0.956 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.005' | |||
| AT1G62130 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.748 | 8 | 4 | 4 | 5 | 66.67% | 55.56% | 12 | 9 | 0.837 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.064' | |||
| AT1G62120 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.629 | 19 | 11 | 19 | 21 | 63.33% | 52.50% | 30 | 40 | 0.634 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||
| AT1G62120 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.415 | 15 | 15 | 15 | 32 | 50.00% | 68.09% | 30 | 47 | 0.317 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||
| AT1G62110 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.967 | 34 | 19 | 19 | 38 | 64.15% | 66.67% | 53 | 57 | 0.97 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||
| AT1G62110 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.716 | 54 | 49 | 104 | 73 | 52.43% | 41.24% | 103 | 177 | 0.216 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||
| AT1G62085 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 62 | 35 | 78 | 45 | 63.92% | 36.59% | 97 | 123 | 1.413 | 5.53 x 10-4 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.301' | ||
| AT1G62085 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.175 | 45 | 4 | 32 | 27 | 91.84% | 45.76% | 49 | 59 | 3.007 | 4.9 x 10-6 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.027' | ||
| AT1G62080 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 649 | 0 | 7 | 0 | 100.00% | 0.00% | 649 | 7 | 307.858 | 7.0 x 10-16 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '8.28' | ||
| AT1G62080 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 17 | 0 | 0 | 0 | 100.00% | 17 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '10.098' | ||||
| AT1G62075 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G62075 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G62070 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0 | 79981.149 | 5463 | 2 | 0 | 1641 | 99.96% | 100.00% | 5465 | 1641 | 0.786 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '5.583' | ||
| AT1G62070 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0 | 439.119 | 144 | 0 | 0 | 45 | 100.00% | 100.00% | 144 | 45 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '5.932' | ||
| AT1G62060 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0 | 732.882 | 103 | 0 | 0 | 105 | 100.00% | 100.00% | 103 | 105 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '10.098' | ||
| AT1G62060 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0 | 43305.536 | 3640 | 1 | 3 | 2380 | 99.97% | 99.87% | 3641 | 2383 | 0.385 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '8.28' | ||
| AT1G62050 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.178 | 78 | 22 | 27 | 54 | 78.00% | 66.67% | 100 | 81 | 0.268 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.973' | |||
| AT1G62050 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 39 | 28 | 50 | 38 | 58.21% | 43.18% | 67 | 88 | 0.206 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '1.002' | |||
| AT1G62045 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.984 | 3 | 3 | 12 | 9 | 50.00% | 42.86% | 6 | 21 | 0.908 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.718' | |||
| AT1G62045 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 4 | 0 | 1 | 0 | 100.00% | 0.00% | 4 | 1 | 0.258 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.825' | |||
| AT1G62040 | ATG8C | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.862 | 373 | 102 | 175 | 203 | 78.53% | 53.70% | 475 | 378 | 2.071 | 4.8 x 10-13 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.666' | |
| AT1G62040 | ATG8C | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.866 | 76 | 101 | 130 | 153 | 42.94% | 54.06% | 177 | 283 | 0.0881 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.82' | ||
| AT1G62035 | MIR171C | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | ||||
| AT1G62035 | MIR171C | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | ||||
| AT1G62030 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '0' | |||||
| AT1G62030 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.925 | 2 | 4 | 3 | 10 | 33.33% | 76.92% | 6 | 13 | 0.24 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.013' | |||
| AT1G62020 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.361 | 89 | 78 | 82 | 109 | 53.29% | 57.07% | 167 | 191 | 0.719 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '1.04' | |||
| AT1G62020 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0039 | 1.091 | 123 | 37 | 61 | 155 | 76.88% | 71.76% | 160 | 216 | 0.54 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.063' | ||
| AT1G62010 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.273' | |||||
| AT1G62010 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.507 | 0 | 3 | 1 | 0 | 0.00% | 0.00% | 3 | 1 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.42' | |||
| AT1G62000 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.549 | 12 | 1 | 9 | 4 | 92.31% | 30.77% | 13 | 13 | 1.472 | 0.0128 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '10.098' | ||
| AT1G62000 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 8.3 x 10-5 | 2.521 | 347 | 0 | 147 | 25 | 100.00% | 14.53% | 347 | 172 | 348.67 | 0.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '8.28' | |
| AT1G61990 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.745 | 45 | 9 | 23 | 24 | 83.33% | 51.06% | 54 | 47 | 1.352 | 4.36 x 10-3 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.153' | ||
| AT1G61990 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.865 | 114 | 47 | 145 | 69 | 70.81% | 32.24% | 161 | 214 | 2.732 | 2.16 x 10-12 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.183' | ||
| AT1G61980 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.656 | 44 | 32 | 55 | 27 | 57.89% | 32.93% | 76 | 82 | 1.13 | 0.011 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | ||
| AT1G61980 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 42 | 9 | 22 | 19 | 82.35% | 46.34% | 51 | 41 | 1.458 | 2.49 x 10-3 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | ||
| AT1G61970 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.789 | 13 | 3 | 4 | 2 | 81.25% | 33.33% | 16 | 6 | 0.143 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||
| AT1G61970 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.912 | 8 | 4 | 12 | 9 | 66.67% | 42.86% | 12 | 21 | 0.449 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||
| AT1G61960 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.946 | 10 | 5 | 6 | 2 | 66.67% | 25.00% | 15 | 8 | 0.205 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||
| AT1G61960 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.85 | 1 | 0 | 9 | 5 | 100.00% | 35.71% | 1 | 14 | 0.493 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||
| AT1G61950 | CPK19 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.076' | ||||
| AT1G61950 | CPK19 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.074' | ||||
| AT1G61940 | TLP4 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '0' | ||||
| AT1G61940 | TLP4 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '0' | ||||
| AT1G61930 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0019 | 1.196 | 144 | 92 | 116 | 150 | 61.02% | 56.39% | 236 | 266 | 0.573 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.078' | ||
| AT1G61930 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.987 | 76 | 43 | 79 | 42 | 63.87% | 34.71% | 119 | 121 | 1.58 | 7.52 x 10-5 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.008' | ||
| AT1G61920 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.122' | |||||
| AT1G61920 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-1.024' | |||||
| AT1G61910 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G61910 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G61900 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.923 | 31 | 31 | 53 | 46 | 50.00% | 46.46% | 62 | 99 | 0.839 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.31' | |||
| AT1G61900 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0485 | 0.0 | 58 | 15 | 30 | 71 | 79.45% | 70.30% | 73 | 101 | 0.419 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.714' | ||
| AT1G61890 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0 | 1.327 | 709 | 180 | 378 | 680 | 79.75% | 64.27% | 889 | 1058 | 1.64 | 1.8 x 10-12 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.96' | |
| AT1G61890 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.322 | 504 | 305 | 467 | 348 | 62.30% | 42.70% | 809 | 815 | 1.675 | 7.39 x 10-14 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '1.972' | ||
| AT1G61880 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT1G61880 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G61870 | PPR336 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.55 | 121 | 35 | 86 | 124 | 77.56% | 59.05% | 156 | 210 | 1.254 | 1.96 x 10-3 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.203' | |
| AT1G61870 | PPR336 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.408 | 267 | 159 | 441 | 329 | 62.68% | 42.73% | 426 | 770 | 1.604 | 8.19 x 10-10 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-1.182' | |
| AT1G61860 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.933 | 15 | 17 | 29 | 39 | 46.88% | 57.35% | 32 | 68 | 0.588 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.23' | |||
| AT1G61860 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.7 x 10-5 | 1.745 | 32 | 4 | 17 | 68 | 88.89% | 80.00% | 36 | 85 | 0.51 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.566' | ||
| AT1G61850 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.126 | 93 | 30 | 35 | 80 | 75.61% | 69.57% | 123 | 115 | 0.573 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.376' | |||
| AT1G61850 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.741 | 36 | 42 | 26 | 42 | 46.15% | 61.76% | 78 | 68 | 0.193 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.824' | |||
| AT1G61840 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '0' | |||||
| AT1G61840 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '0' | |||||
| AT1G61820 | BGLU46 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.353 | 12 | 4 | 16 | 44 | 75.00% | 73.33% | 16 | 60 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.254' | ||
| AT1G61820 | BGLU46 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.878 | 14 | 14 | 11 | 15 | 50.00% | 57.69% | 28 | 26 | 0.777 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.266' | ||
| AT1G61810 | BGLU45 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '3.841' | ||||
| AT1G61810 | BGLU45 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 4.0 x 10-6 | 2.304 | 8 | 0 | 0 | 17 | 100.00% | 100.00% | 8 | 17 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '3.841' | |
| AT1G61800 | GPT2 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.414 | 1914 | 823 | 2077 | 3353 | 69.93% | 61.75% | 2737 | 5430 | 1.257 | 1.1 x 10-11 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-1.313' | |
| AT1G61800 | GPT2 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.092 | 344 | 226 | 407 | 369 | 60.35% | 47.55% | 570 | 776 | 1.233 | 4.22 x 10-5 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '2.244' | |
| AT1G61795 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.644 | 5 | 4 | 3 | 8 | 55.56% | 72.73% | 9 | 11 | 0.687 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||
| AT1G61795 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT1G61790 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 2.95 x 10-3 | 1.061 | 465 | 193 | 240 | 581 | 70.67% | 70.77% | 658 | 821 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.587' | ||
| AT1G61790 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.826 | 381 | 280 | 426 | 340 | 57.64% | 44.39% | 661 | 766 | 1.267 | 8.47 x 10-6 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.401' | ||
| AT1G61780 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.917 | 38 | 27 | 58 | 35 | 58.46% | 37.63% | 65 | 93 | 0.0 | 0.0499 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.401' | ||
| AT1G61780 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.321 | 54 | 13 | 24 | 41 | 80.60% | 63.08% | 67 | 65 | 0.108 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.572' | |||
| AT1G61770 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.719 | 7 | 4 | 5 | 20 | 63.64% | 80.00% | 11 | 25 | 0.588 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '1.17' | |||
| AT1G61770 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.258 | 10 | 3 | 3 | 7 | 76.92% | 70.00% | 13 | 10 | 0.885 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '2.35' | |||
| AT1G61760 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.003' | |||||
| AT1G61760 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.003' | |||||
| AT1G61750 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '0' | |||||
| AT1G61750 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '0' | |||||
| AT1G61740 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.764 | 24 | 8 | 28 | 15 | 75.00% | 34.88% | 32 | 43 | 1.384 | 4.31 x 10-3 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.027' | ||
| AT1G61740 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0464 | 0.0 | 4 | 0 | 0 | 4 | 100.00% | 100.00% | 4 | 4 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.033' |