| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 5 | 80 | 94.12% | 0 | 85 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' | ||||
| AT5G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.643 | 64 | 28 | 13 | 33 | 69.57% | 71.74% | 92 | 46 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' | |||
| AT5G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | PEG | not imprinted | 1.44 x 10-5 | 27.923 | 0 | 6 | 26 | 1 | 0.00% | 3.70% | 6 | 27 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' | ||
| AT5G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.567 | 7 | 13 | 5 | 69 | 35.00% | 93.24% | 20 | 74 | 4.372 | 4.12 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' | ||
| AT5G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 63 | 35 | 56 | 132 | 64.29% | 70.21% | 98 | 188 | 0.52 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' | |||
| AT5G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 23 | 0 | 10 | 0 | 100.00% | 0.00% | 23 | 10 | 15.586 | 3.01 x 10-8 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' | ||
| AT5G17370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 16 | 0 | 0.00% | 0 | 16 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.09' | ||||
| AT5G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 24 | 10 | 24 | 44 | 70.59% | 64.71% | 34 | 68 | 0.844 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .07 | |||
| AT5G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.144 | 9 | 14 | 48 | 111 | 39.13% | 69.81% | 23 | 159 | 1.137 | 0.0209 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT5G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 1 | 0 | 5 | 10 | 100.00% | 66.67% | 1 | 15 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||
| AT5G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.876 | 160 | 57 | 44 | 55 | 73.73% | 55.56% | 217 | 99 | 1.121 | 7.97 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT5G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 35 | 7 | 28 | 21 | 83.33% | 42.86% | 42 | 49 | 1.73 | 1.63 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT5G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 6.1 x 10-9 | 5.082 | 30 | 0 | 0 | 10 | 100.00% | 100.00% | 30 | 10 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT5G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.654 | 17 | 11 | 8 | 36 | 60.71% | 81.82% | 28 | 44 | 0.126 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||
| AT5G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||||
| AT5G17360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||||
| AT5G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.746 | 383 | 145 | 300 | 423 | 72.54% | 58.51% | 528 | 723 | 1.335 | 2.13 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .07 | ||
| AT5G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.83 x 10-3 | 1.054 | 662 | 147 | 379 | 485 | 81.83% | 56.13% | 809 | 864 | 2.574 | 5.5 x 10-29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |
| AT5G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.04 x 10-14 | 1.898 | 574 | 69 | 194 | 273 | 89.27% | 58.46% | 643 | 467 | 3.834 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |
| AT5G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.641 | 870 | 265 | 164 | 225 | 76.65% | 57.84% | 1135 | 389 | 1.706 | 5.97 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT5G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.49 x 10-3 | 1.229 | 298 | 162 | 1 | 19 | 64.78% | 95.00% | 460 | 20 | 1.453 | 5.19 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |
| AT5G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 4.37 x 10-3 | 1.006 | 393 | 88 | 232 | 312 | 81.70% | 57.35% | 481 | 544 | 2.225 | 1.62 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |
| AT5G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||||
| AT5G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||||
| AT5G17350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||||
| AT5G17340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.05 | |||||
| AT5G17340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||||
| AT5G17340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||||
| AT5G17340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||||
| AT5G17340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||||
| AT5G17340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||||
| AT5G17340 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||||
| AT5G17340 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||||
| AT5G17340 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||||
| AT5G17330 | GAD | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 22 | 6 | 6 | 6 | 78.57% | 50.00% | 28 | 12 | 0.25 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .2 | ||
| AT5G17330 | GAD | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.122 | 4 | 4 | 12 | 5 | 50.00% | 29.41% | 8 | 17 | 0.536 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||
| AT5G17330 | GAD | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 0 | 50 | 0 | 9 | 0.00% | 100.00% | 50 | 9 | 30.494 | 2.36 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |
| AT5G17330 | GAD | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.89 | 8 | 1 | 5 | 7 | 88.89% | 58.33% | 9 | 12 | 0.37 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||
| AT5G17330 | GAD | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||||
| AT5G17330 | GAD | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | no data | 0.0442 | 0.0 | 12 | 6 | 0 | 7 | 66.67% | 100.00% | 18 | 7 | 0.185 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |
| AT5G17330 | GAD | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 1.0 | 6 | 4 | 6 | 16 | 60.00% | 72.73% | 10 | 22 | 0.853 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||
| AT5G17330 | GAD | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 0.472 | 0 | 1 | 4 | 5 | 0.00% | 55.56% | 1 | 9 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||
| AT5G17330 | GAD | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||||
| AT5G17320 | HDG9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | MEG | not imprinted | 0.0 | 44.055 | 117 | 6 | 16 | 526 | 95.12% | 97.05% | 123 | 542 | 0.442 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -3.6 | |
| AT5G17320 | HDG9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 0.0 | 14.997 | 96 | 42 | 6 | 495 | 69.57% | 98.80% | 138 | 501 | 11.482 | 3.08 x 10-23 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-3.6' |
| AT5G17320 | HDG9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 18 | 626 | 97.20% | 0 | 644 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-3.6' | |||
| AT5G17320 | HDG9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | MEG | MEG | 0.0 | 56.236 | 321 | 14 | 7 | 243 | 95.82% | 97.20% | 335 | 250 | 0.745 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-3.6' | |
| AT5G17320 | HDG9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | MEG | 0.0 | 294.952 | 653 | 45 | 1 | 623 | 93.55% | 99.84% | 698 | 624 | 5.603 | 1.49 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-3.6' |
| AT5G17320 | HDG9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | MEG | 7.71 x 10-19 | 11.073 | 34 | 0 | 14 | 121 | 100.00% | 89.63% | 34 | 135 | 0.106 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-3.6' | |
| AT5G17320 | HDG9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | maternally biased | not imprinted | 0.0 | 30.554 | 261 | 61 | 11 | 746 | 81.06% | 98.55% | 322 | 757 | 6.676 | 1.64 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-3.6' |
| AT5G17320 | HDG9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 2.04 x 10-22 | 19.982 | 25 | 0 | 11 | 245 | 100.00% | 95.70% | 25 | 256 | 0.701 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-3.6' | |
| AT5G17320 | HDG9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.3 x 10-14 | 7.03 | 116 | 21 | 0 | 31 | 84.67% | 100.00% | 137 | 31 | 0.0 | 0.0183 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-3.6' |
| AT5G17310 | UGP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | not imprinted | 1.0 | 2 | 0 | 2 | 2 | 100.00% | 50.00% | 2 | 4 | 0.658 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.29 | ||
| AT5G17310 | UGP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.218 | 14 | 1 | 27 | 29 | 93.33% | 51.79% | 15 | 56 | 1.305 | 8.69 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | |
| AT5G17310 | UGP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 3.72 x 10-4 | 5.064 | 0 | 18 | 5 | 6 | 0.00% | 54.55% | 18 | 11 | 1.823 | 1.54 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' |
| AT5G17310 | UGP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | ||||
| AT5G17310 | UGP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | ||||
| AT5G17310 | UGP2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | ||||
| AT5G17310 | UGP2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.539 | 52 | 12 | 58 | 74 | 81.25% | 56.06% | 64 | 132 | 1.301 | 1.67 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | |
| AT5G17310 | UGP2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.17 x 10-10 | 2.529 | 84 | 36 | 9 | 112 | 70.00% | 92.56% | 120 | 121 | 1.858 | 1.24 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' |
| AT5G17310 | UGP2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 1.02 x 10-10 | 17.958 | 37 | 19 | 58 | 0 | 66.07% | 0.00% | 56 | 58 | 17.026 | 7.08 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' |
| AT5G17300 | RVE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 7.62 x 10-3 | 1.052 | 32 | 2 | 44 | 64 | 94.12% | 59.26% | 34 | 108 | 1.989 | 4.24 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.76 |
| AT5G17300 | RVE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.66 x 10-6 | 1.93 | 64 | 2 | 106 | 123 | 96.97% | 53.71% | 66 | 229 | 5.735 | 8.75 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' |
| AT5G17300 | RVE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0993 | 53 | 19 | 59 | 47 | 73.61% | 44.34% | 72 | 106 | 1.425 | 2.07 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |
| AT5G17300 | RVE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.741 | 90 | 13 | 23 | 9 | 87.38% | 28.12% | 103 | 32 | 4.696 | 4.56 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |
| AT5G17300 | RVE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 28 | 18 | 0 | 0 | 60.87% | 46 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |||
| AT5G17300 | RVE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 28 | 0 | 17 | 0 | 100.00% | 0.00% | 28 | 17 | 32.256 | 4.1 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |
| AT5G17300 | RVE1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0726 | 93 | 37 | 84 | 217 | 71.54% | 72.09% | 130 | 301 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | ||
| AT5G17300 | RVE1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.26 x 10-14 | 6.55 | 62 | 0 | 21 | 56 | 100.00% | 72.73% | 62 | 77 | 3.684 | 2.73 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' |
| AT5G17300 | RVE1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0217 | 0.0 | 86 | 1 | 126 | 32 | 98.85% | 20.25% | 87 | 158 | 40.322 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' |
| AT5G17290 | APG5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 4.72 x 10-6 | 1.562 | 84 | 15 | 144 | 336 | 84.85% | 70.00% | 99 | 480 | 1.148 | 6.73 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.87 |
| AT5G17290 | APG5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0212 | 0.0 | 85 | 26 | 220 | 471 | 76.58% | 68.16% | 111 | 691 | 0.144 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.87' | |
| AT5G17290 | APG5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.718 | 31 | 32 | 45 | 151 | 49.21% | 77.04% | 63 | 196 | 1.525 | 1.04 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.87' | |
| AT5G17290 | APG5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 85 | 49 | 23 | 52 | 63.43% | 69.33% | 134 | 75 | 0.694 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.87' | ||
| AT5G17290 | APG5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 24 | 35 | 0 | 1 | 40.68% | 100.00% | 59 | 1 | 0.5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.87' | ||
| AT5G17290 | APG5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 1.26 x 10-14 | 4.383 | 55 | 5 | 17 | 109 | 91.67% | 86.51% | 60 | 126 | 0.428 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.87' | |
| AT5G17290 | APG5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.61 x 10-5 | 1.183 | 409 | 151 | 336 | 803 | 73.04% | 70.50% | 560 | 1139 | 0.473 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.87' | |
| AT5G17290 | APG5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.39 x 10-4 | 1.169 | 80 | 9 | 31 | 50 | 89.89% | 61.73% | 89 | 81 | 1.797 | 4.29 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.87' |
| AT5G17290 | APG5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.37 x 10-3 | 1.26 | 75 | 49 | 50 | 49 | 60.48% | 49.49% | 124 | 99 | 0.122 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.87' | |
| AT5G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0399 | 0.0 | 50 | 10 | 29 | 58 | 83.33% | 66.67% | 60 | 87 | 0.0856 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .57 | ||
| AT5G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 8.22 x 10-10 | 2.584 | 64 | 6 | 44 | 135 | 91.43% | 75.42% | 70 | 179 | 1.098 | 0.0124 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | |
| AT5G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.119 | 28 | 23 | 16 | 25 | 54.90% | 60.98% | 51 | 41 | 0.752 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | |||
| AT5G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | |||||
| AT5G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | |||||
| AT5G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | |||||
| AT5G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.28 x 10-4 | 1.277 | 96 | 22 | 114 | 263 | 81.36% | 69.76% | 118 | 377 | 0.0 | 0.0347 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | |
| AT5G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 0 | 53 | 0 | 8 | 0.00% | 100.00% | 53 | 8 | 28.733 | 1.07 x 10-9 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||
| AT5G17280 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 30 | 100.00% | 0 | 30 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||||
| AT5G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.239 | 49 | 14 | 19 | 41 | 77.78% | 68.33% | 63 | 60 | 0.491 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.45 | |||
| AT5G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0238 | 0.0 | 78 | 32 | 38 | 123 | 70.91% | 76.40% | 110 | 161 | 0.461 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | ||
| AT5G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.15 x 10-4 | 1.319 | 35 | 0 | 37 | 34 | 100.00% | 47.89% | 35 | 71 | 6.25 | 2.09 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |
| AT5G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.271 | 50 | 22 | 11 | 39 | 69.44% | 78.00% | 72 | 50 | 0.65 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |||
| AT5G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 6 | 5 | 0 | 0 | 54.55% | 11 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | ||||
| AT5G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 3.26 x 10-7 | 3.676 | 7 | 0 | 0 | 31 | 100.00% | 100.00% | 7 | 31 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | ||
| AT5G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 196 | 85 | 112 | 198 | 69.75% | 63.87% | 281 | 310 | 0.256 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |||
| AT5G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.181 | 92 | 33 | 11 | 28 | 73.60% | 71.79% | 125 | 39 | 0.939 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |||
| AT5G17270 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 16 | 100.00% | 0 | 16 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | ||||
| AT5G17262 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT5G17262 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G17262 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |