| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G63930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 1.0 | 18 | 7 | 6 | 11 | 72.00% | 64.71% | 25 | 17 | 0.956 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | |||
| AT5G63930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 11 | 0 | 0 | 0 | 100.00% | 11 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||||
| AT5G63930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | |||||
| AT5G63930 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0269 | 0.0 | 135 | 24 | 54 | 78 | 84.91% | 59.09% | 159 | 132 | 1.792 | 5.69 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | |
| AT5G63930 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 1 | 16 | 94.12% | 0 | 17 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||||
| AT5G63930 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 5.28 x 10-15 | 8.346 | 168 | 0 | 26 | 33 | 100.00% | 55.93% | 168 | 59 | 20.723 | 8.78 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | |
| AT5G63920 | TOP3A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.127 | 322 | 53 | 206 | 189 | 85.87% | 47.85% | 375 | 395 | 4.071 | 1.11 x 10-28 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.83 | |
| AT5G63920 | TOP3A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.623 | 260 | 63 | 239 | 204 | 80.50% | 46.05% | 323 | 443 | 3.049 | 1.97 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT5G63920 | TOP3A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 3.87 x 10-8 | 2.591 | 80 | 0 | 92 | 63 | 100.00% | 40.65% | 80 | 155 | 22.102 | 1.15 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' |
| AT5G63920 | TOP3A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.115 | 57 | 34 | 22 | 24 | 62.64% | 52.17% | 91 | 46 | 0.499 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT5G63920 | TOP3A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 8.91 x 10-4 | 1.007 | 20 | 9 | 0 | 15 | 68.97% | 100.00% | 29 | 15 | 0.0 | 0.0263 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' |
| AT5G63920 | TOP3A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 60 | 14 | 0 | 0 | 81.08% | 74 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |||
| AT5G63920 | TOP3A | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.93 | 310 | 90 | 308 | 374 | 77.50% | 54.84% | 400 | 682 | 1.931 | 3.16 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT5G63920 | TOP3A | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 141 | 28 | 128 | 101 | 83.43% | 44.10% | 169 | 229 | 3.289 | 2.14 x 10-15 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT5G63920 | TOP3A | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0668 | 308 | 35 | 64 | 48 | 89.80% | 42.86% | 343 | 112 | 5.712 | 2.05 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT5G63910 | FCLY | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.224 | 139 | 28 | 124 | 143 | 83.23% | 53.56% | 167 | 267 | 2.263 | 1.38 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.17 | |
| AT5G63910 | FCLY | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.013 | 0.0 | 176 | 47 | 184 | 318 | 78.92% | 63.35% | 223 | 502 | 1.312 | 1.33 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' |
| AT5G63910 | FCLY | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 0.0 | 17.113 | 169 | 0 | 78 | 159 | 100.00% | 67.09% | 169 | 237 | 16.473 | 5.9 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' |
| AT5G63910 | FCLY | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.389 | 68 | 36 | 21 | 26 | 65.38% | 55.32% | 104 | 47 | 0.506 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' | ||
| AT5G63910 | FCLY | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 6.34 x 10-12 | 12.35 | 81 | 0 | 0 | 9 | 100.00% | 100.00% | 81 | 9 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' | |
| AT5G63910 | FCLY | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.97 x 10-3 | 0.0 | 26 | 15 | 0 | 15 | 63.41% | 100.00% | 41 | 15 | 1.206 | 9.18 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' |
| AT5G63910 | FCLY | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 458 | 155 | 303 | 418 | 74.71% | 57.98% | 613 | 721 | 1.54 | 7.72 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' | |
| AT5G63910 | FCLY | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0307 | 0.0 | 216 | 91 | 45 | 120 | 70.36% | 72.73% | 307 | 165 | 0.767 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' | |
| AT5G63910 | FCLY | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.81 x 10-10 | 2.19 | 420 | 14 | 131 | 85 | 96.77% | 39.35% | 434 | 216 | 20.806 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' |
| AT5G63905 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.02 x 10-5 | 1.515 | 93 | 14 | 113 | 225 | 86.92% | 66.57% | 107 | 338 | 1.529 | 1.24 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.31 | |
| AT5G63905 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0176 | 0.0 | 76 | 24 | 101 | 246 | 76.00% | 70.89% | 100 | 347 | 0.516 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.31' | ||
| AT5G63905 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.01 x 10-6 | 1.897 | 39 | 37 | 117 | 116 | 51.32% | 49.79% | 76 | 233 | 0.975 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.31' | ||
| AT5G63905 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.31' | |||||
| AT5G63905 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.31' | |||||
| AT5G63905 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.31' | |||||
| AT5G63905 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.158 | 148 | 60 | 159 | 349 | 71.15% | 68.70% | 208 | 508 | 0.712 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.31' | |||
| AT5G63905 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.869 | 109 | 21 | 87 | 62 | 83.85% | 41.61% | 130 | 149 | 3.315 | 1.21 x 10-12 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.31' | ||
| AT5G63905 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 5.1 x 10-11 | 4.253 | 120 | 0 | 62 | 49 | 100.00% | 44.14% | 120 | 111 | 27.234 | 1.85 x 10-25 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.31' | |
| AT5G63900 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 2 | 0 | 3 | 2 | 100.00% | 40.00% | 2 | 5 | 0.619 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.2 | |||
| AT5G63900 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | ||||
| AT5G63900 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | |||||
| AT5G63900 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | |||||
| AT5G63900 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | |||||
| AT5G63900 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | |||||
| AT5G63900 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 5 | 0 | 4 | 0.00% | 100.00% | 5 | 4 | 1.355 | 0.0218 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | ||
| AT5G63900 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | |||||
| AT5G63900 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | |||||
| AT5G63890 | HDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0702 | 251 | 113 | 163 | 400 | 68.96% | 71.05% | 364 | 563 | 0.7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.29 | ||
| AT5G63890 | HDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.35 x 10-3 | 1.036 | 325 | 129 | 273 | 634 | 71.59% | 69.90% | 454 | 907 | 0.672 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | |
| AT5G63890 | HDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 387 | 250 | 337 | 862 | 60.75% | 71.89% | 637 | 1199 | 1.243 | 3.43 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | |
| AT5G63890 | HDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.532 | 110 | 41 | 26 | 53 | 72.85% | 67.09% | 151 | 79 | 0.604 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | ||
| AT5G63890 | HDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.867 | 122 | 47 | 30 | 51 | 72.19% | 62.96% | 169 | 81 | 0.188 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | ||
| AT5G63890 | HDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0591 | 43 | 15 | 12 | 41 | 74.14% | 77.36% | 58 | 53 | 0.936 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | ||
| AT5G63890 | HDH | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0505 | 571 | 282 | 477 | 1154 | 66.94% | 70.75% | 853 | 1631 | 0.116 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | ||
| AT5G63890 | HDH | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.035 | 0.0 | 482 | 317 | 367 | 782 | 60.33% | 68.06% | 799 | 1149 | 1.075 | 9.05 x 10-4 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' |
| AT5G63890 | HDH | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.13 x 10-4 | 1.089 | 864 | 139 | 269 | 267 | 86.14% | 49.81% | 1003 | 536 | 4.422 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' |
| AT5G63880 | VPS20.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.329 | 5 | 2 | 3 | 19 | 71.43% | 86.36% | 7 | 22 | 0.759 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.53 | ||
| AT5G63880 | VPS20.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 34 | 72 | 67.92% | 0 | 106 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |||
| AT5G63880 | VPS20.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.04 x 10-6 | 3.145 | 55 | 0 | 3 | 9 | 100.00% | 75.00% | 55 | 12 | 1.398 | 6.82 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' |
| AT5G63880 | VPS20.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.949 | 10 | 5 | 6 | 8 | 66.67% | 57.14% | 15 | 14 | 0.934 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | ||
| AT5G63880 | VPS20.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 1.03 x 10-9 | 3.329 | 63 | 75 | 0 | 85 | 45.65% | 100.00% | 138 | 85 | 18.873 | 2.83 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' |
| AT5G63880 | VPS20.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 58 | 22 | 0 | 0 | 72.50% | 80 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |||
| AT5G63880 | VPS20.1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.155 | 100 | 62 | 44 | 166 | 61.73% | 79.05% | 162 | 210 | 1.226 | 1.11 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |
| AT5G63880 | VPS20.1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.87 x 10-3 | 1.009 | 93 | 0 | 18 | 7 | 100.00% | 28.00% | 93 | 25 | 26.676 | 2.84 x 10-15 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' |
| AT5G63880 | VPS20.1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.84 x 10-3 | 1.095 | 80 | 21 | 30 | 84 | 79.21% | 73.68% | 101 | 114 | 0.462 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |
| AT5G63870 | PP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.662 | 43 | 23 | 30 | 83 | 65.15% | 73.45% | 66 | 113 | 0.491 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .13 | ||
| AT5G63870 | PP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.139 | 26 | 9 | 65 | 170 | 74.29% | 72.34% | 35 | 235 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.13' | ||
| AT5G63870 | PP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 9.43 x 10-3 | 1.089 | 35 | 33 | 66 | 105 | 51.47% | 61.40% | 68 | 171 | 0.234 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.13' | |
| AT5G63870 | PP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.322 | 39 | 13 | 9 | 25 | 75.00% | 73.53% | 52 | 34 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.13' | ||
| AT5G63870 | PP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.14 x 10-5 | 1.762 | 13 | 0 | 0 | 8 | 100.00% | 100.00% | 13 | 8 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.13' | |
| AT5G63870 | PP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.455 | 26 | 33 | 53 | 189 | 44.07% | 78.10% | 59 | 242 | 2.01 | 1.99 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.13' | |
| AT5G63870 | PP7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.178 | 288 | 121 | 185 | 391 | 70.42% | 67.88% | 409 | 576 | 0.579 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.13' | ||
| AT5G63870 | PP7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.455 | 43 | 19 | 60 | 142 | 69.35% | 70.30% | 62 | 202 | 0.977 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.13' | ||
| AT5G63870 | PP7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 5.09 x 10-10 | 2.099 | 130 | 13 | 81 | 156 | 90.91% | 65.82% | 143 | 237 | 2.263 | 1.69 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.13' |
| AT5G63860 | UVR8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 9.53 x 10-7 | 1.274 | 547 | 110 | 390 | 558 | 83.26% | 58.86% | 657 | 948 | 2.489 | 7.02 x 10-25 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .58 |
| AT5G63860 | UVR8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.574 | 862 | 294 | 798 | 1157 | 74.57% | 59.18% | 1156 | 1955 | 1.619 | 2.23 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.58' | |
| AT5G63860 | UVR8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.53 x 10-9 | 1.449 | 545 | 78 | 276 | 340 | 87.48% | 55.19% | 623 | 616 | 3.82 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.58' |
| AT5G63860 | UVR8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.58' | ||||
| AT5G63860 | UVR8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.58' | ||||
| AT5G63860 | UVR8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.58' | ||||
| AT5G63860 | UVR8 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.001 | 1.049 | 1525 | 500 | 675 | 1130 | 75.31% | 62.60% | 2025 | 1805 | 1.497 | 2.02 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.58' |
| AT5G63860 | UVR8 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.23 x 10-6 | 1.355 | 294 | 188 | 189 | 246 | 61.00% | 56.55% | 482 | 435 | 0.23 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.58' | |
| AT5G63860 | UVR8 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 943 | 65 | 974 | 264 | 93.55% | 21.32% | 1008 | 1238 | 36.363 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.58' | |
| AT5G63850 | AAP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .21 | |||
| AT5G63850 | AAP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | ||||
| AT5G63850 | AAP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | ||||
| AT5G63850 | AAP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | ||||
| AT5G63850 | AAP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | ||||
| AT5G63850 | AAP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | ||||
| AT5G63850 | AAP4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | ||||
| AT5G63850 | AAP4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | ||||
| AT5G63850 | AAP4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | ||||
| AT5G63840 | RSW3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.811 | 149 | 58 | 122 | 210 | 71.98% | 63.25% | 207 | 332 | 0.0926 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .23 | ||
| AT5G63840 | RSW3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.7 x 10-11 | 1.533 | 372 | 105 | 253 | 629 | 77.99% | 71.32% | 477 | 882 | 0.0 | 0.0209 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' |
| AT5G63840 | RSW3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.49 x 10-3 | 1.066 | 121 | 68 | 140 | 176 | 64.02% | 55.70% | 189 | 316 | 0.0985 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |
| AT5G63840 | RSW3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.52 x 10-7 | 1.134 | 3414 | 1586 | 809 | 1963 | 68.28% | 70.82% | 5000 | 2772 | 0.0693 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |
| AT5G63840 | RSW3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.5 x 10-4 | 1.067 | 1679 | 879 | 844 | 1402 | 65.64% | 62.42% | 2558 | 2246 | 0.0 | 0.0316 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' |
| AT5G63840 | RSW3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 1218 | 648 | 503 | 1075 | 65.27% | 68.12% | 1866 | 1578 | 0.115 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | ||
| AT5G63840 | RSW3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 5.48 x 10-15 | 1.206 | 3291 | 1446 | 2519 | 5952 | 69.47% | 70.26% | 4737 | 8471 | 0.511 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |
| AT5G63840 | RSW3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 1453 | 691 | 766 | 1453 | 67.77% | 65.48% | 2144 | 2219 | 0.153 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | ||
| AT5G63840 | RSW3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.38 x 10-6 | 1.115 | 1466 | 768 | 566 | 1588 | 65.62% | 73.72% | 2234 | 2154 | 1.224 | 9.84 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' |
| AT5G63830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.856 | 19 | 8 | 20 | 42 | 70.37% | 67.74% | 27 | 62 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.26 | |||
| AT5G63830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.601 | 25 | 5 | 17 | 23 | 83.33% | 57.50% | 30 | 40 | 0.0759 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.26' | |||
| AT5G63830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 5.69 x 10-8 | 2.603 | 51 | 23 | 1 | 44 | 68.92% | 97.78% | 74 | 45 | 2.118 | 1.53 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.26' | |
| AT5G63830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.5 | 155 | 65 | 48 | 61 | 70.45% | 55.96% | 220 | 109 | 0.0 | 0.0475 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.26' |