| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G04190 | TPR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | paternally biased | not imprinted | 4.43 x 10-3 | 2.654 | 15 | 8 | 11 | 0 | 65.22% | 0.00% | 23 | 11 | 2.332 | 8.11 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' |
| AT1G04190 | TPR3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | not imprinted | 7.95 x 10-17 | 18.144 | 63 | 0 | 0 | 17 | 100.00% | 100.00% | 63 | 17 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT1G04190 | TPR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.385 | 215 | 92 | 168 | 242 | 70.03% | 59.02% | 307 | 410 | 1.045 | 0.0082 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT1G04190 | TPR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.49 x 10-3 | 0.0 | 48 | 0 | 9 | 7 | 100.00% | 43.75% | 48 | 16 | 6.204 | 9.12 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' |
| AT1G04190 | TPR3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.163 | 307 | 85 | 207 | 295 | 78.32% | 58.76% | 392 | 502 | 1.67 | 3.21 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT1G04180 | YUC9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||
| AT1G04180 | YUC9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT1G04180 | YUC9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT1G04180 | YUC9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT1G04180 | YUC9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT1G04180 | YUC9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT1G04180 | YUC9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT1G04180 | YUC9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT1G04180 | YUC9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .07 | |||
| AT1G04171 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT1G04171 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G04171 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G04171 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G04171 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT1G04171 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G04171 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G04171 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G04171 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G04170 | EIF2 GAMMA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 9.73 x 10-3 | 0.0 | 2077 | 1103 | 1160 | 2812 | 65.31% | 70.80% | 3180 | 3972 | 1.118 | 1.76 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' |
| AT1G04170 | EIF2 GAMMA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.14 x 10-4 | 1.051 | 2854 | 803 | 2147 | 2905 | 78.04% | 57.50% | 3657 | 5052 | 2.297 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' |
| AT1G04170 | EIF2 GAMMA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0259 | 0.0 | 956 | 306 | 1292 | 1975 | 75.75% | 60.45% | 1262 | 3267 | 1.675 | 1.47 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' |
| AT1G04170 | EIF2 GAMMA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.874 | 736 | 365 | 152 | 320 | 66.85% | 67.80% | 1101 | 472 | 0.947 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT1G04170 | EIF2 GAMMA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.02 x 10-12 | 1.439 | 464 | 360 | 922 | 1598 | 56.31% | 63.41% | 824 | 2520 | 1.081 | 5.46 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' |
| AT1G04170 | EIF2 GAMMA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.12 x 10-21 | 1.349 | 4551 | 1726 | 1885 | 1882 | 72.50% | 49.96% | 6277 | 3767 | 2.344 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' |
| AT1G04170 | EIF2 GAMMA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 5.26 x 10-14 | 1.24 | 2281 | 1079 | 2408 | 3241 | 67.89% | 57.37% | 3360 | 5649 | 1.386 | 1.86 x 10-22 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' |
| AT1G04170 | EIF2 GAMMA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.184 | 664 | 287 | 541 | 802 | 69.82% | 59.72% | 951 | 1343 | 1.219 | 4.4 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.83 | |
| AT1G04170 | EIF2 GAMMA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 6.42 x 10-11 | 1.215 | 1794 | 775 | 1094 | 2681 | 69.83% | 71.02% | 2569 | 3775 | 0.392 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT1G04160 | XIB | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.664 | 45 | 8 | 4 | 0 | 84.91% | 0.00% | 53 | 4 | 2.808 | 2.31 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |
| AT1G04160 | XIB | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 2.98 x 10-14 | 2.9 | 144 | 16 | 39 | 120 | 90.00% | 75.47% | 160 | 159 | 1.225 | 1.09 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' |
| AT1G04160 | XIB | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.824 | 119 | 56 | 78 | 132 | 68.00% | 62.86% | 175 | 210 | 0.515 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .05 | ||
| AT1G04160 | XIB | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.33 x 10-6 | 1.461 | 258 | 13 | 361 | 218 | 95.20% | 37.65% | 271 | 579 | 16.028 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' |
| AT1G04160 | XIB | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.92 x 10-10 | 1.719 | 259 | 50 | 122 | 271 | 83.82% | 68.96% | 309 | 393 | 1.393 | 2.8 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' |
| AT1G04160 | XIB | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 10 | 6 | 0 | 0 | 62.50% | 16 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |||
| AT1G04160 | XIB | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 5.04 x 10-7 | 1.37 | 299 | 70 | 206 | 405 | 81.03% | 66.28% | 369 | 611 | 1.417 | 2.72 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' |
| AT1G04160 | XIB | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.38 | 494 | 114 | 140 | 151 | 81.25% | 51.89% | 608 | 291 | 2.606 | 1.73 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |
| AT1G04160 | XIB | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.362 | 29 | 10 | 4 | 13 | 74.36% | 76.47% | 39 | 17 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | ||
| AT1G04150 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 0.793 | 20 | 13 | 5 | 8 | 60.61% | 61.54% | 33 | 13 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |||
| AT1G04150 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |||||
| AT1G04150 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0014 | 1.584 | 8 | 28 | 19 | 46 | 22.22% | 70.77% | 36 | 65 | 2.321 | 4.72 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT1G04150 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.719 | 45 | 24 | 14 | 38 | 65.22% | 73.08% | 69 | 52 | 0.573 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |||
| AT1G04150 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 7 | 100.00% | 0 | 7 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | ||||
| AT1G04150 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0942 | 97 | 54 | 62 | 85 | 64.24% | 57.82% | 151 | 147 | 0.45 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |||
| AT1G04150 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.473 | 15 | 10 | 10 | 13 | 60.00% | 56.52% | 25 | 23 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.04 | |||
| AT1G04150 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 14 | 0 | 0 | 0 | 100.00% | 14 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | ||||
| AT1G04150 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | paternally biased | not imprinted | 3.9 x 10-7 | 11.845 | 0 | 33 | 10 | 13 | 0.00% | 56.52% | 33 | 23 | 5.005 | 1.45 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT1G04140 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.43 x 10-6 | 1.238 | 470 | 199 | 364 | 365 | 70.25% | 50.07% | 669 | 729 | 1.726 | 7.16 x 10-14 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | |
| AT1G04140 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0664 | 189 | 77 | 167 | 384 | 71.05% | 69.69% | 266 | 551 | 0.923 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .11 | |||
| AT1G04140 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.234 | 10 | 15 | 2 | 37 | 40.00% | 94.87% | 25 | 39 | 3.384 | 4.62 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | ||
| AT1G04140 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.57 x 10-3 | 1.043 | 940 | 387 | 642 | 1363 | 70.84% | 67.98% | 1327 | 2005 | 0.171 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | ||
| AT1G04140 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.874 | 1033 | 310 | 436 | 509 | 76.92% | 53.86% | 1343 | 945 | 2.213 | 2.0 x 10-30 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | ||
| AT1G04140 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.53 | 281 | 97 | 63 | 107 | 74.34% | 62.94% | 378 | 170 | 0.0 | 0.0311 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | ||
| AT1G04140 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0325 | 0.0 | 231 | 216 | 145 | 399 | 51.68% | 73.35% | 447 | 544 | 1.768 | 8.65 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | |
| AT1G04140 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0214 | 0.0 | 285 | 84 | 215 | 354 | 77.24% | 62.21% | 369 | 569 | 1.365 | 2.99 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | |
| AT1G04140 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.924 | 258 | 123 | 417 | 769 | 67.72% | 64.84% | 381 | 1186 | 0.457 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.11' | |||
| AT1G04130 | TPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 3 | 2 | 7 | 22 | 60.00% | 75.86% | 5 | 29 | 0.729 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT1G04130 | TPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 0.0379 | 0.0 | 29 | 14 | 1 | 16 | 67.44% | 94.12% | 43 | 17 | 0.131 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |
| AT1G04130 | TPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 6.71 x 10-3 | 1.038 | 62 | 12 | 23 | 55 | 83.78% | 70.51% | 74 | 78 | 0.122 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |
| AT1G04130 | TPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 74 | 100.00% | 0 | 74 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |||
| AT1G04130 | TPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 12 | 55 | 82.09% | 0 | 67 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |||
| AT1G04130 | TPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 22 | 100.00% | 0 | 22 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |||
| AT1G04130 | TPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |||
| AT1G04130 | TPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||||
| AT1G04130 | TPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0718 | 16 | 2 | 5 | 16 | 88.89% | 76.19% | 18 | 21 | 0.609 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .24 | ||
| AT1G04120 | ABCC5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.448 | 73 | 19 | 80 | 113 | 79.35% | 58.55% | 92 | 193 | 1.241 | 2.03 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.04 | |
| AT1G04120 | ABCC5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 3.56 x 10-21 | 9.443 | 87 | 9 | 2 | 57 | 90.62% | 96.61% | 96 | 59 | 0.27 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT1G04120 | ABCC5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.58 x 10-7 | 1.861 | 443 | 41 | 36 | 52 | 91.53% | 59.09% | 484 | 88 | 3.567 | 2.54 x 10-12 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' |
| AT1G04120 | ABCC5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.994 | 161 | 108 | 44 | 121 | 59.85% | 73.33% | 269 | 165 | 1.026 | 7.86 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT1G04120 | ABCC5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 3.77 x 10-3 | 1.022 | 1253 | 501 | 516 | 1040 | 71.44% | 66.84% | 1754 | 1556 | 1.007 | 0.0134 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' |
| AT1G04120 | ABCC5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0244 | 0.0 | 159 | 50 | 318 | 605 | 76.08% | 65.55% | 209 | 923 | 1.064 | 0.0092 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' |
| AT1G04120 | ABCC5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0103 | 1.021 | 426 | 160 | 137 | 308 | 72.70% | 69.21% | 586 | 445 | 0.457 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT1G04120 | ABCC5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | not imprinted | 0.0 | 61.555 | 372 | 1 | 23 | 134 | 99.73% | 85.35% | 373 | 157 | 7.254 | 1.22 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' |
| AT1G04120 | ABCC5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0554 | 460 | 63 | 350 | 255 | 87.95% | 42.15% | 523 | 605 | 6.56 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT1G04110 | SDD1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||||
| AT1G04110 | SDD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 1.0 | 5 | 10 | 2 | 13 | 33.33% | 86.67% | 15 | 15 | 1.174 | 0.0201 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | |
| AT1G04110 | SDD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||||
| AT1G04110 | SDD1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 1.0 | 13 | 7 | 6 | 13 | 65.00% | 68.42% | 20 | 19 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||
| AT1G04110 | SDD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||||
| AT1G04110 | SDD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||||
| AT1G04110 | SDD1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||||
| AT1G04110 | SDD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 7 | 3 | 1 | 3 | 70.00% | 75.00% | 10 | 4 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.33 | ||
| AT1G04110 | SDD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||||
| AT1G04100 | IAA10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | ||||
| AT1G04100 | IAA10 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 57 | 0 | 0 | 0 | 100.00% | 57 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |||
| AT1G04100 | IAA10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 9.3 x 10-4 | 1.272 | 13 | 0 | 2 | 12 | 100.00% | 85.71% | 13 | 14 | 0.674 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .15 | |
| AT1G04100 | IAA10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | ||||
| AT1G04100 | IAA10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | ||||
| AT1G04100 | IAA10 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0456 | 0.0 | 9 | 4 | 43 | 17 | 69.23% | 28.33% | 13 | 60 | 1.068 | 0.0114 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' |
| AT1G04100 | IAA10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 13 | 36 | 73.47% | 0 | 49 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |||
| AT1G04100 | IAA10 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 4 | 33 | 89.19% | 0 | 37 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |||
| AT1G04100 | IAA10 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.684 | 37 | 15 | 26 | 53 | 71.15% | 67.09% | 52 | 79 | 0.871 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | ||
| AT1G04090 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0112 | 0.0 | 113 | 43 | 27 | 87 | 72.44% | 76.32% | 156 | 114 | 0.666 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | ||
| AT1G04090 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0542 | 218 | 14 | 65 | 33 | 93.97% | 33.67% | 232 | 98 | 11.862 | 1.0 x 10-29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | ||
| AT1G04090 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | |||||
| AT1G04090 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | |||||
| AT1G04090 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 9.77 x 10-8 | 2.531 | 69 | 59 | 0 | 47 | 53.91% | 100.00% | 128 | 47 | 7.403 | 2.44 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' |