| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G09575 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.379 | 21 | 17 | 11 | 63 | 55.26% | 85.14% | 38 | 74 | 1.316 | 3.71 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.51 | ||
| AT1G09575 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.108 | 7 | 0 | 0 | 2 | 100.00% | 100.00% | 7 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.51' | |||
| AT1G09575 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 12 | 100.00% | 0 | 12 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.51' | ||||
| AT1G09575 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.6 x 10-15 | 13.418 | 44 | 0 | 0 | 18 | 100.00% | 100.00% | 44 | 18 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.51' | ||
| AT1G09575 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 9.13 x 10-8 | 2.848 | 26 | 2 | 15 | 86 | 92.86% | 85.15% | 28 | 101 | 0.499 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.51' | ||
| AT1G09575 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.51' | |||||
| AT1G09570 | PHYA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.37 x 10-3 | 3.535 | 37 | 16 | 14 | 0 | 69.81% | 0.00% | 53 | 14 | 4.727 | 3.82 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.03' |
| AT1G09570 | PHYA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 4.192 | 1181 | 65 | 509 | 676 | 94.78% | 57.05% | 1246 | 1185 | 9.506 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.03' |
| AT1G09570 | PHYA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 5.81 x 10-4 | 1.057 | 656 | 189 | 683 | 1076 | 77.63% | 61.17% | 845 | 1759 | 1.703 | 1.3 x 10-16 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.03' |
| AT1G09570 | PHYA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.58 x 10-17 | 1.52 | 872 | 190 | 1032 | 1727 | 82.11% | 62.60% | 1062 | 2759 | 2.171 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.03' |
| AT1G09570 | PHYA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.77 x 10-13 | 1.551 | 1636 | 89 | 1129 | 523 | 94.84% | 31.66% | 1725 | 1652 | 28.914 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.03' |
| AT1G09570 | PHYA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.408 | 97 | 41 | 18 | 47 | 70.29% | 72.31% | 138 | 65 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.03' | ||
| AT1G09570 | PHYA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.3 x 10-18 | 1.483 | 1162 | 304 | 1077 | 2041 | 79.26% | 65.46% | 1466 | 3118 | 1.651 | 4.41 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.03' |
| AT1G09570 | PHYA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 3.16 x 10-11 | 2.533 | 143 | 25 | 19 | 84 | 85.12% | 81.55% | 168 | 103 | 0.589 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.03' | |
| AT1G09570 | PHYA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 4.56 x 10-3 | 1.039 | 375 | 118 | 496 | 890 | 76.06% | 64.21% | 493 | 1386 | 1.291 | 6.27 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.03 |
| AT1G09560 | GLP5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.91 x 10-22 | 8.869 | 61 | 8 | 5 | 114 | 88.41% | 95.80% | 69 | 119 | 0.157 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.44 | |
| AT1G09560 | GLP5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 104.406 | 444 | 11 | 22 | 626 | 97.58% | 96.60% | 455 | 648 | 0.55 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.44' | |
| AT1G09560 | GLP5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 27.881 | 615 | 34 | 7 | 128 | 94.76% | 94.81% | 649 | 135 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.44' | |
| AT1G09560 | GLP5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 4.54 x 10-22 | 4.737 | 177 | 21 | 18 | 104 | 89.39% | 85.25% | 198 | 122 | 0.363 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.44' | |
| AT1G09560 | GLP5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 124.537 | 222 | 0 | 12 | 184 | 100.00% | 93.88% | 222 | 196 | 2.119 | 3.67 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.44' |
| AT1G09560 | GLP5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 186.321 | 141 | 0 | 0 | 78 | 100.00% | 100.00% | 141 | 78 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.44' | |
| AT1G09560 | GLP5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0 | 35.966 | 129 | 8 | 0 | 69 | 94.16% | 100.00% | 137 | 69 | 0.0781 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.44' | |
| AT1G09560 | GLP5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 119.422 | 172 | 0 | 8 | 171 | 100.00% | 95.53% | 172 | 179 | 1.046 | 0.0114 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.44' |
| AT1G09560 | GLP5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 34.171 | 231 | 0 | 53 | 164 | 100.00% | 75.58% | 231 | 217 | 14.275 | 1.13 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.44' |
| AT1G09550 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 28.335 | 1220 | 3 | 447 | 419 | 99.75% | 48.38% | 1223 | 866 | 128.992 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '6.99' | |
| AT1G09550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0 | 1076.622 | 310 | 0 | 0 | 205 | 100.00% | 100.00% | 310 | 205 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '6.99' | ||
| AT1G09550 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 49783.444 | 3096 | 2 | 1 | 2659 | 99.94% | 99.96% | 3098 | 2660 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '6.99' | ||
| AT1G09550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 3708.634 | 359 | 3 | 0 | 1406 | 99.17% | 100.00% | 362 | 1406 | 1.036 | 0.0248 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 6.99 | |
| AT1G09550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 2205.36 | 1373 | 2 | 9 | 805 | 99.85% | 98.89% | 1375 | 814 | 1.103 | 0.0138 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '6.99' | |
| AT1G09550 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 1502.421 | 813 | 1 | 0 | 161 | 99.88% | 100.00% | 814 | 161 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '6.99' | ||
| AT1G09550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 2941.132 | 975 | 1 | 2 | 500 | 99.90% | 99.60% | 976 | 502 | 0.321 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '6.99' | ||
| AT1G09550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 7083.239 | 527 | 0 | 6 | 2706 | 100.00% | 99.78% | 527 | 2712 | 0.736 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '6.99' | ||
| AT1G09550 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0 | 176.133 | 163 | 1 | 1 | 140 | 99.39% | 99.29% | 164 | 141 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '6.99' | ||
| AT1G09540 | MYB61 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT1G09540 | MYB61 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | MEG | 1.34 x 10-24 | 25.114 | 140 | 0 | 4 | 30 | 100.00% | 88.24% | 140 | 34 | 1.786 | 1.97 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT1G09540 | MYB61 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 2 | 35 | 94.59% | 0 | 37 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT1G09540 | MYB61 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | MEG | 0.0 | 602.467 | 314 | 0 | 4 | 305 | 100.00% | 98.71% | 314 | 309 | 0.117 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT1G09540 | MYB61 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.11 x 10-10 | 4.4 | 137 | 0 | 41 | 32 | 100.00% | 43.84% | 137 | 73 | 28.895 | 1.77 x 10-23 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT1G09540 | MYB61 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT1G09540 | MYB61 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | MEG | not imprinted | 0.0 | 506.259 | 722 | 6 | 10 | 681 | 99.18% | 98.55% | 728 | 691 | 0.491 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT1G09540 | MYB61 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT1G09540 | MYB61 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | MEG | MEG | 0.0 | 172.076 | 96 | 0 | 2 | 202 | 100.00% | 99.02% | 96 | 204 | 1.0 | TAIR10 | ||
| AT1G09530 | PIF3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.833 | 55 | 42 | 57 | 153 | 56.70% | 72.86% | 97 | 210 | 1.016 | 0.0178 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.38 | |
| AT1G09530 | PIF3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.0833 | 5 | 4 | 0 | 17 | 55.56% | 100.00% | 9 | 17 | 1.03 | 0.0231 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |
| AT1G09530 | PIF3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.789 | 163 | 157 | 50 | 169 | 50.94% | 77.17% | 320 | 219 | 1.911 | 7.07 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |
| AT1G09530 | PIF3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.15 | 82 | 107 | 23 | 81 | 43.39% | 77.88% | 189 | 104 | 2.18 | 2.73 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |
| AT1G09530 | PIF3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.43 x 10-4 | 1.419 | 59 | 12 | 112 | 296 | 83.10% | 72.55% | 71 | 408 | 0.144 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |
| AT1G09530 | PIF3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.831 | 35 | 36 | 39 | 182 | 49.30% | 82.35% | 71 | 221 | 2.145 | 2.78 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |
| AT1G09530 | PIF3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.84 x 10-3 | 1.073 | 92 | 51 | 49 | 223 | 64.34% | 81.99% | 143 | 272 | 1.319 | 2.12 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' |
| AT1G09530 | PIF3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | ||||
| AT1G09530 | PIF3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | ||||
| AT1G09520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' | |||||
| AT1G09520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 1.4 x 10-23 | 11.062 | 98 | 58 | 0 | 139 | 62.82% | 100.00% | 156 | 139 | 15.499 | 1.01 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' | |
| AT1G09520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' | |||||
| AT1G09520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 42 | 18 | 35 | 61 | 70.00% | 63.54% | 60 | 96 | 0.68 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.58 | |||
| AT1G09520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.557 | 100 | 60 | 21 | 68 | 62.50% | 76.40% | 160 | 89 | 0.102 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' | |||
| AT1G09520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' | |||||
| AT1G09520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.63 x 10-3 | 1.294 | 24 | 25 | 46 | 58 | 48.98% | 55.77% | 49 | 104 | 0.562 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' | ||
| AT1G09520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.846 | 26 | 17 | 39 | 87 | 60.47% | 69.05% | 43 | 126 | 0.486 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' | |||
| AT1G09520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 2.29 x 10-10 | 2.208 | 155 | 14 | 68 | 125 | 91.72% | 64.77% | 169 | 193 | 2.614 | 1.22 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' | |
| AT1G09510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 13 | 0 | 0 | 0 | 100.00% | 13 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.28' | ||||
| AT1G09510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 72 | 11 | 13.25% | 0 | 83 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.28' | ||||
| AT1G09510 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 31 | 0 | 0.00% | 0 | 31 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.28' | ||||
| AT1G09510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.513 | 23 | 0 | 167 | 25 | 100.00% | 13.02% | 23 | 192 | 26.35 | 7.66 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.28' | ||
| AT1G09510 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 10 | 0 | 0 | 0 | 100.00% | 10 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.28' | ||||
| AT1G09510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.604 | 0 | 1 | 2 | 0 | 0.00% | 0.00% | 1 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.28' | |||
| AT1G09510 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.945 | 39 | 2 | 376 | 64 | 95.12% | 14.55% | 41 | 440 | 23.438 | 7.16 x 10-26 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.28' | ||
| AT1G09510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.28' | |||||
| AT1G09510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.824 | 11 | 0 | 153 | 38 | 100.00% | 19.90% | 11 | 191 | 8.097 | 4.44 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -2.28 | ||
| AT1G09500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.505 | 177 | 117 | 199 | 448 | 60.20% | 69.24% | 294 | 647 | 0.0 | 0.0218 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.79 | ||
| AT1G09500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.404 | 681 | 307 | 673 | 1101 | 68.93% | 62.06% | 988 | 1774 | 1.077 | 1.09 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | ||
| AT1G09500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.131 | 141 | 116 | 47 | 99 | 54.86% | 67.81% | 257 | 146 | 0.0 | 0.0415 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | ||
| AT1G09500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.33 x 10-4 | 1.264 | 104 | 12 | 71 | 101 | 89.66% | 58.72% | 116 | 172 | 2.498 | 1.54 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | |
| AT1G09500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.797 | 174 | 93 | 233 | 531 | 65.17% | 69.50% | 267 | 764 | 0.307 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | |||
| AT1G09500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0195 | 0.0 | 1163 | 361 | 438 | 435 | 76.31% | 49.83% | 1524 | 873 | 2.525 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | |
| AT1G09500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0582 | 122 | 73 | 61 | 218 | 62.56% | 78.14% | 195 | 279 | 1.207 | 5.48 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | ||
| AT1G09500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.4 x 10-7 | 1.328 | 548 | 197 | 441 | 353 | 73.56% | 44.46% | 745 | 794 | 2.568 | 2.0 x 10-30 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | |
| AT1G09500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0621 | 2045 | 262 | 1801 | 796 | 88.64% | 30.65% | 2307 | 2597 | 14.288 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | ||
| AT1G09490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.73 x 10-10 | 3.781 | 76 | 0 | 48 | 54 | 100.00% | 52.94% | 76 | 102 | 11.95 | 1.69 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | |
| AT1G09490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 6 | 0 | 0 | 0 | 100.00% | 6 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | ||||
| AT1G09490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0342 | 0.0 | 170 | 58 | 118 | 246 | 74.56% | 67.58% | 228 | 364 | 0.161 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | ||
| AT1G09490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0162 | 1.025 | 80 | 53 | 87 | 121 | 60.15% | 58.17% | 133 | 208 | 0.916 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.89 | ||
| AT1G09490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.609 | 14 | 13 | 2 | 3 | 51.85% | 60.00% | 27 | 5 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | |||
| AT1G09490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 0.373 | 1 | 0 | 9 | 42 | 100.00% | 82.35% | 1 | 51 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | |||
| AT1G09490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.324 | 81 | 56 | 42 | 90 | 59.12% | 68.18% | 137 | 132 | 0.164 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | |||
| AT1G09490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.215 | 154 | 41 | 107 | 157 | 78.97% | 59.47% | 195 | 264 | 1.422 | 4.02 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | ||
| AT1G09490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.255 | 1 | 15 | 13 | 80 | 6.25% | 86.02% | 16 | 93 | 8.734 | 1.87 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | ||
| AT1G09483 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G09483 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G09483 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G09483 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 3 | 0 | 0 | 0.00% | 3 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT1G09483 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G09483 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G09483 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G09483 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT1G09483 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | 1.0 | TAIR10 | |||||
| AT1G09480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.89 | |||||
| AT1G09480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | |||||
| AT1G09480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | |||||
| AT1G09480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' |