| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G17770 | SUVH7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | PEG | PEG | 1.76 x 10-15 | 46.573 | 15 | 80 | 22 | 1 | 15.79% | 4.35% | 95 | 23 | 0.244 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.83' | |
| AT1G17770 | SUVH7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | PEG | PEG | 6.25 x 10-9 | 72.027 | 1 | 7 | 118 | 2 | 12.50% | 1.67% | 8 | 120 | 0.285 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.83' | |
| AT1G17770 | SUVH7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | PEG | PEG | 2.02 x 10-20 | 18.947 | 28 | 74 | 46 | 8 | 27.45% | 14.81% | 102 | 54 | 0.257 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.83' | |
| AT1G17770 | SUVH7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | PEG | PEG | 5.11 x 10-22 | 411.742 | 0 | 31 | 49 | 0 | 0.00% | 0.00% | 31 | 49 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.83' | |
| AT1G17770 | SUVH7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.83' | ||||
| AT1G17770 | SUVH7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 8 | 0 | 0.00% | 0 | 8 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.83' | |||
| AT1G17770 | SUVH7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | PEG | no data | 8.76 x 10-7 | 15.485 | 2 | 10 | 24 | 2 | 16.67% | 7.69% | 12 | 26 | 0.754 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.83' | |
| AT1G17770 | SUVH7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | PEG | 1.0 | 7 | 6 | 6 | 14 | 53.85% | 70.00% | 13 | 20 | 0.561 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.83' | ||
| AT1G17770 | SUVH7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | paternally biased | PEG | 4.02 x 10-15 | 41.612 | 18 | 14 | 151 | 1 | 56.25% | 0.66% | 32 | 152 | 17.197 | 2.53 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -2.83 |
| AT1G17760 | CSTF77 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.772 | 251 | 103 | 272 | 414 | 70.90% | 60.35% | 354 | 686 | 1.093 | 3.08 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .54 | |
| AT1G17760 | CSTF77 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.412 | 38 | 40 | 33 | 97 | 48.72% | 74.62% | 78 | 130 | 1.345 | 1.01 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | |
| AT1G17760 | CSTF77 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 18 | 0 | 0 | 0 | 100.00% | 18 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | |||
| AT1G17760 | CSTF77 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0143 | 0.0 | 243 | 73 | 66 | 131 | 76.90% | 66.50% | 316 | 197 | 0.0 | 0.0175 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' |
| AT1G17760 | CSTF77 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 270 | 140 | 123 | 255 | 65.85% | 67.46% | 410 | 378 | 0.752 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | ||
| AT1G17760 | CSTF77 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.15 x 10-3 | 0.0 | 15 | 0 | 21 | 34 | 100.00% | 61.82% | 15 | 55 | 1.409 | 4.09 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' |
| AT1G17760 | CSTF77 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.27 | 985 | 363 | 246 | 426 | 73.07% | 63.39% | 1348 | 672 | 1.188 | 6.53 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | |
| AT1G17760 | CSTF77 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.58 x 10-9 | 1.347 | 611 | 138 | 500 | 818 | 81.58% | 62.06% | 749 | 1318 | 2.014 | 6.2 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' |
| AT1G17760 | CSTF77 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0211 | 0.0 | 204 | 81 | 82 | 198 | 71.58% | 70.71% | 285 | 280 | 0.934 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | |
| AT1G17750 | PEPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | not imprinted | 2.06 x 10-23 | 28.411 | 39 | 0 | 0 | 43 | 100.00% | 100.00% | 39 | 43 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.81' | |
| AT1G17750 | PEPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.27 x 10-5 | 2.403 | 111 | 2 | 11 | 15 | 98.23% | 57.69% | 113 | 26 | 5.169 | 6.85 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.81' |
| AT1G17750 | PEPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.81' | ||||
| AT1G17750 | PEPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0768 | 50 | 6 | 16 | 21 | 89.29% | 56.76% | 56 | 37 | 1.47 | 1.53 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.81' | |
| AT1G17750 | PEPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 24 | 0 | 21 | 0 | 100.00% | 0.00% | 24 | 21 | 34.154 | 1.24 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.81' | |
| AT1G17750 | PEPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 3 | 1 | 0 | 0 | 75.00% | 4 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.81' | |||
| AT1G17750 | PEPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.744 | 10 | 5 | 12 | 16 | 66.67% | 57.14% | 15 | 28 | 0.924 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .81 | ||
| AT1G17750 | PEPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.81' | ||||
| AT1G17750 | PEPR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 55 | 0 | 0 | 0 | 100.00% | 55 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.81' | |||
| AT1G17745 | PGDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0 | 150.795 | 69 | 0 | 0 | 129 | 100.00% | 100.00% | 69 | 129 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.87' | |
| AT1G17745 | PGDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 102.675 | 90 | 0 | 1 | 100 | 100.00% | 99.01% | 90 | 101 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.87' | |
| AT1G17745 | PGDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 173.818 | 108 | 0 | 0 | 95 | 100.00% | 100.00% | 108 | 95 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.87' | |
| AT1G17745 | PGDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 124.993 | 238 | 0 | 0 | 31 | 100.00% | 100.00% | 238 | 31 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.87' | |
| AT1G17745 | PGDH | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 23 | 1 | 0 | 0 | 95.83% | 24 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.87' | |||
| AT1G17745 | PGDH | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.24 x 10-18 | 20.33 | 60 | 0 | 0 | 20 | 100.00% | 100.00% | 60 | 20 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.87' | |
| AT1G17745 | PGDH | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 589.135 | 325 | 0 | 0 | 107 | 100.00% | 100.00% | 325 | 107 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.87' | |
| AT1G17745 | PGDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 3.26 x 10-15 | 22.363 | 120 | 0 | 0 | 11 | 100.00% | 100.00% | 120 | 11 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.87' | |
| AT1G17745 | PGDH | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 4.03 x 10-14 | 10.387 | 23 | 0 | 1 | 40 | 100.00% | 97.56% | 23 | 41 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 4.87 | |
| AT1G17744 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 3.17 | |||||
| AT1G17744 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.17' | |||||
| AT1G17744 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.17' | |||||
| AT1G17744 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.17' | |||||
| AT1G17744 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.17' | |||||
| AT1G17744 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.17' | |||||
| AT1G17744 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.17' | |||||
| AT1G17744 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.17' | |||||
| AT1G17744 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.17' | |||||
| AT1G17730 | VPS46.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.87 x 10-6 | 2.003 | 42 | 0 | 253 | 222 | 100.00% | 46.74% | 42 | 475 | 10.408 | 3.99 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' |
| AT1G17730 | VPS46.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 1.0 | 191 | 87 | 39 | 75 | 68.71% | 65.79% | 278 | 114 | 0.869 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | ||
| AT1G17730 | VPS46.1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | PEG | not imprinted | 1.38 x 10-17 | 4.605 | 38 | 47 | 413 | 248 | 44.71% | 37.52% | 85 | 661 | 0.264 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | |
| AT1G17730 | VPS46.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.63 x 10-3 | 1.016 | 205 | 64 | 122 | 254 | 76.21% | 67.55% | 269 | 376 | 0.0 | 0.0406 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' |
| AT1G17730 | VPS46.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 32 | 23 | 0 | 0 | 58.18% | 55 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | |||
| AT1G17730 | VPS46.1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 4.43 x 10-3 | 1.029 | 392 | 138 | 314 | 632 | 73.96% | 66.81% | 530 | 946 | 1.016 | 0.0135 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' |
| AT1G17730 | VPS46.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 57 | 25 | 77 | 135 | 69.51% | 63.68% | 82 | 212 | 0.603 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.02 | ||
| AT1G17730 | VPS46.1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.545 | 61 | 19 | 211 | 326 | 76.25% | 60.71% | 80 | 537 | 1.05 | 0.0137 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | |
| AT1G17730 | VPS46.1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 36 | 51 | 0 | 0 | 41.38% | 87 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | |||
| AT1G17720 | ATB BETA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.25 x 10-5 | 1.541 | 111 | 49 | 119 | 73 | 69.38% | 38.02% | 160 | 192 | 1.977 | 1.45 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' |
| AT1G17720 | ATB BETA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0157 | 0.0 | 210 | 67 | 202 | 390 | 75.81% | 65.88% | 277 | 592 | 1.042 | 0.01 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' |
| AT1G17720 | ATB BETA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.379 | 141 | 38 | 38 | 61 | 78.77% | 61.62% | 179 | 99 | 1.082 | 0.013 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | |
| AT1G17720 | ATB BETA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.26 x 10-6 | 1.374 | 117 | 21 | 115 | 225 | 84.78% | 66.18% | 138 | 340 | 1.436 | 5.77 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' |
| AT1G17720 | ATB BETA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0179 | 0.0 | 169 | 84 | 27 | 95 | 66.80% | 77.87% | 253 | 122 | 0.0 | 0.036 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' |
| AT1G17720 | ATB BETA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.78 x 10-3 | 1.011 | 120 | 50 | 65 | 201 | 70.59% | 75.56% | 170 | 266 | 0.331 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | |
| AT1G17720 | ATB BETA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 5.14 x 10-4 | 1.094 | 414 | 129 | 287 | 550 | 76.24% | 65.71% | 543 | 837 | 1.192 | 1.34 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' |
| AT1G17720 | ATB BETA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0902 | 78 | 38 | 15 | 13 | 67.24% | 46.43% | 116 | 28 | 0.0733 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | ||
| AT1G17720 | ATB BETA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.942 | 108 | 31 | 111 | 140 | 77.70% | 55.78% | 139 | 251 | 1.449 | 8.02 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.19 | |
| AT1G17710 | PEPC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .32 | |||
| AT1G17710 | PEPC1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' | |||
| AT1G17710 | PEPC1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 24 | 0 | 0 | 0 | 100.00% | 24 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' | |||
| AT1G17710 | PEPC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' | ||||
| AT1G17710 | PEPC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' | ||||
| AT1G17710 | PEPC1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 6 | 0 | 0 | 0 | 100.00% | 6 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' | |||
| AT1G17710 | PEPC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' | ||
| AT1G17710 | PEPC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' | |||
| AT1G17710 | PEPC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' | |||
| AT1G17700 | PRA1.F1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | ||||
| AT1G17700 | PRA1.F1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | ||||
| AT1G17700 | PRA1.F1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | ||||
| AT1G17700 | PRA1.F1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | ||||
| AT1G17700 | PRA1.F1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | ||||
| AT1G17700 | PRA1.F1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | ||||
| AT1G17700 | PRA1.F1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.06 | |||
| AT1G17700 | PRA1.F1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | ||||
| AT1G17700 | PRA1.F1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | ||||
| AT1G17690 | NOF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 0.133 | 9 | 0 | 0 | 1 | 100.00% | 100.00% | 9 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.83' | ||
| AT1G17690 | NOF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.219 | 31 | 17 | 53 | 68 | 64.58% | 56.20% | 48 | 121 | 0.528 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.83' | ||
| AT1G17690 | NOF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0196 | 0.0 | 36 | 20 | 5 | 41 | 64.29% | 89.13% | 56 | 46 | 1.082 | 0.0204 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.83' |
| AT1G17690 | NOF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.75 x 10-6 | 2.686 | 104 | 0 | 16 | 13 | 100.00% | 44.83% | 104 | 29 | 16.277 | 1.32 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.83' |
| AT1G17690 | NOF1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0699 | 159 | 17 | 19 | 0 | 90.34% | 0.00% | 176 | 19 | 28.197 | 1.73 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.83' | |
| AT1G17690 | NOF1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 3.45 x 10-4 | 2.065 | 134 | 0 | 12 | 7 | 100.00% | 36.84% | 134 | 19 | 24.28 | 9.1 x 10-13 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.83' |
| AT1G17690 | NOF1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.154 | 193 | 32 | 159 | 151 | 85.78% | 48.71% | 225 | 310 | 3.506 | 8.87 x 10-19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.83' | |
| AT1G17690 | NOF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0056 | 1.191 | 22 | 18 | 38 | 36 | 55.00% | 48.65% | 40 | 74 | 0.662 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.83' | |
| AT1G17690 | NOF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.775 | 34 | 18 | 20 | 32 | 65.38% | 61.54% | 52 | 52 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.83 | ||
| AT1G17680 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.609 | 46 | 18 | 60 | 125 | 71.88% | 67.57% | 64 | 185 | 0.826 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.75 | |||
| AT1G17680 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.129 | 171 | 56 | 139 | 255 | 75.33% | 64.72% | 227 | 394 | 1.003 | 0.0195 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.75' | ||
| AT1G17680 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.71 x 10-4 | 1.205 | 40 | 0 | 44 | 32 | 100.00% | 42.11% | 40 | 76 | 9.115 | 8.56 x 10-11 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.75' | |
| AT1G17680 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0483 | 0.0 | 42 | 25 | 50 | 59 | 62.69% | 54.13% | 67 | 109 | 0.35 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.75' | ||
| AT1G17680 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0214 | 0.0 | 91 | 68 | 33 | 49 | 57.23% | 59.76% | 159 | 82 | 0.891 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.75' | ||
| AT1G17680 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.332 | 163 | 29 | 46 | 45 | 84.90% | 49.45% | 192 | 91 | 2.58 | 1.72 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.75' | ||
| AT1G17680 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.106 | 208 | 67 | 45 | 94 | 75.64% | 67.63% | 275 | 139 | 0.242 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.75' | |||
| AT1G17680 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.654 | 87 | 47 | 64 | 164 | 64.93% | 71.93% | 134 | 228 | 0.306 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.75' | |||
| AT1G17680 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.51 x 10-3 | 0.0 | 12 | 0 | 27 | 53 | 100.00% | 66.25% | 12 | 80 | 1.005 | 0.0222 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.75' | |
| AT1G17670 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |