| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G42400 | SDG25 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.562 | 24 | 21 | 66 | 180 | 53.33% | 73.17% | 45 | 246 | 1.011 | 0.03 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.39' | |
| AT5G42400 | SDG25 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.839 | 169 | 240 | 34 | 183 | 41.32% | 84.33% | 409 | 217 | 4.364 | 1.15 x 10-25 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.39' | |
| AT5G42400 | SDG25 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.513 | 115 | 51 | 42 | 99 | 69.28% | 70.21% | 166 | 141 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.39' | ||
| AT5G42400 | SDG25 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 3.3 x 10-11 | 1.805 | 198 | 82 | 66 | 332 | 70.71% | 83.42% | 280 | 398 | 1.238 | 1.9 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.39' |
| AT5G42400 | SDG25 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.58 x 10-3 | 1.074 | 174 | 124 | 97 | 159 | 58.39% | 62.11% | 298 | 256 | 0.473 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.39' | |
| AT5G42400 | SDG25 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 7.84 x 10-3 | 0.0 | 163 | 51 | 68 | 154 | 76.17% | 69.37% | 214 | 222 | 0.246 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.39' | |
| AT5G42400 | SDG25 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0174 | 0.0 | 35 | 0 | 24 | 10 | 100.00% | 29.41% | 35 | 34 | 10.623 | 1.9 x 10-10 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.39' |
| AT5G42400 | SDG25 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 5.61 x 10-8 | 2.263 | 73 | 2 | 59 | 76 | 97.33% | 56.30% | 75 | 135 | 5.454 | 1.66 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.39' |
| AT5G42390 | SPP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.136 | 225 | 131 | 201 | 359 | 63.20% | 64.11% | 356 | 560 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .56 | ||
| AT5G42390 | SPP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 7.2 x 10-10 | 1.364 | 600 | 175 | 511 | 1069 | 77.42% | 67.66% | 775 | 1580 | 1.247 | 4.43 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.56' |
| AT5G42390 | SPP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.98 x 10-15 | 1.829 | 604 | 121 | 151 | 326 | 83.31% | 68.34% | 725 | 477 | 1.569 | 6.69 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.56' |
| AT5G42390 | SPP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0236 | 0.0 | 1114 | 375 | 287 | 498 | 74.82% | 63.44% | 1489 | 785 | 1.317 | 2.07 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.56' |
| AT5G42390 | SPP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 5.67 x 10-18 | 1.994 | 745 | 128 | 152 | 305 | 85.34% | 66.74% | 873 | 457 | 1.981 | 6.37 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.56' |
| AT5G42390 | SPP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.57 x 10-6 | 1.423 | 223 | 145 | 134 | 158 | 60.60% | 54.11% | 368 | 292 | 0.134 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.56' | |
| AT5G42390 | SPP | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 7.04 x 10-3 | 1.019 | 376 | 164 | 257 | 634 | 69.63% | 71.16% | 540 | 891 | 0.727 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.56' | |
| AT5G42390 | SPP | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 12 | 53 | 81.54% | 0 | 65 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.56' | |||
| AT5G42390 | SPP | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 2.76 x 10-6 | 2.539 | 14 | 31 | 64 | 87 | 31.11% | 57.62% | 45 | 151 | 1.173 | 2.75 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.56' |
| AT5G42380 | CML37 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.836 | 1 | 6 | 3 | 13 | 14.29% | 81.25% | 7 | 16 | 1.257 | 0.0152 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .46 | |
| AT5G42380 | CML37 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0202 | 0.0 | 5 | 0 | 11 | 42 | 100.00% | 79.25% | 5 | 53 | 0.71 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.46' | |
| AT5G42380 | CML37 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.275 | 28 | 38 | 3 | 5 | 42.42% | 62.50% | 66 | 8 | 0.524 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.46' | ||
| AT5G42380 | CML37 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | MEG | 0.37 | 52 | 22 | 5 | 18 | 70.27% | 78.26% | 74 | 23 | 0.836 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.46' | ||
| AT5G42380 | CML37 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | MEG | 3.99 x 10-9 | 5.082 | 10 | 0 | 0 | 30 | 100.00% | 100.00% | 10 | 30 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.46' | |
| AT5G42380 | CML37 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | MEG | 1.14 x 10-7 | 3.659 | 9 | 0 | 0 | 24 | 100.00% | 100.00% | 9 | 24 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.46' | |
| AT5G42380 | CML37 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.49 x 10-6 | 1.744 | 60 | 8 | 25 | 75 | 88.24% | 75.00% | 68 | 100 | 0.104 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.46' | |
| AT5G42380 | CML37 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 27 | 0 | 0 | 0 | 100.00% | 27 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.46' | |||
| AT5G42380 | CML37 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0314 | 0.0 | 48 | 17 | 21 | 9 | 73.85% | 30.00% | 65 | 30 | 1.78 | 1.24 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.46' |
| AT5G42370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.153 | 23 | 2 | 19 | 24 | 92.00% | 55.81% | 25 | 43 | 1.315 | 7.68 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .42 | ||
| AT5G42370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 6.03 x 10-7 | 2.598 | 23 | 0 | 23 | 64 | 100.00% | 73.56% | 23 | 87 | 1.342 | 0.0091 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.42' | |
| AT5G42370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0808 | 14 | 30 | 5 | 14 | 31.82% | 73.68% | 44 | 19 | 1.205 | 4.23 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.42' | ||
| AT5G42370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.42' | |||||
| AT5G42370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.42' | |||||
| AT5G42370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.42' | |||||
| AT5G42370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 61 | 30 | 55 | 110 | 67.03% | 66.67% | 91 | 165 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.42' | |||
| AT5G42370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.365 | 21 | 0 | 7 | 2 | 100.00% | 22.22% | 21 | 9 | 4.52 | 3.67 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.42' | ||
| AT5G42370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 117 | 0 | 19 | 0 | 100.00% | 0.00% | 117 | 19 | 150.642 | 3.39 x 10-23 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.42' | ||
| AT5G42360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.308 | 10 | 6 | 23 | 24 | 62.50% | 51.06% | 16 | 47 | 0.754 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.97 | |||
| AT5G42360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.21 x 10-3 | 0.0 | 12 | 0 | 28 | 47 | 100.00% | 62.67% | 12 | 75 | 1.17 | 0.02 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |
| AT5G42360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |||||
| AT5G42360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.51 | 156 | 60 | 31 | 33 | 72.22% | 51.56% | 216 | 64 | 1.117 | 0.0152 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | ||
| AT5G42360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0037 | 0.0 | 107 | 18 | 111 | 155 | 85.60% | 58.27% | 125 | 266 | 2.036 | 9.85 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |
| AT5G42360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 4.88 x 10-7 | 2.79 | 63 | 12 | 0 | 15 | 84.00% | 100.00% | 75 | 15 | 0.268 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | ||
| AT5G42360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.784 | 162 | 69 | 186 | 344 | 70.13% | 64.91% | 231 | 530 | 0.318 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |||
| AT5G42360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.07 x 10-12 | 5.193 | 75 | 0 | 27 | 46 | 100.00% | 63.01% | 75 | 73 | 7.157 | 8.17 x 10-10 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |
| AT5G42360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.02 x 10-8 | 2.056 | 95 | 30 | 12 | 85 | 76.00% | 87.63% | 125 | 97 | 0.0 | 0.0447 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |
| AT5G42350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.808 | 17 | 7 | 17 | 19 | 70.83% | 52.78% | 24 | 36 | 0.337 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.97 | |||
| AT5G42350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.426 | 4 | 0 | 31 | 37 | 100.00% | 54.41% | 4 | 68 | 0.22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |||
| AT5G42350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.17 x 10-4 | 1.371 | 95 | 0 | 31 | 13 | 100.00% | 29.55% | 95 | 44 | 31.195 | 3.21 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |
| AT5G42350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 35 | 19 | 10 | 24 | 64.81% | 70.59% | 54 | 34 | 0.879 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |||
| AT5G42350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0298 | 0.0 | 22 | 9 | 23 | 104 | 70.97% | 81.89% | 31 | 127 | 0.268 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | ||
| AT5G42350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 6 | 0 | 2 | 0 | 100.00% | 0.00% | 6 | 2 | 0.0534 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |||
| AT5G42350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0704 | 81 | 28 | 65 | 159 | 74.31% | 70.98% | 109 | 224 | 0.778 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |||
| AT5G42350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 1.23 x 10-9 | 7.183 | 53 | 0 | 0 | 8 | 100.00% | 100.00% | 53 | 8 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | ||
| AT5G42350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.13 x 10-4 | 1.668 | 66 | 36 | 36 | 18 | 64.71% | 33.33% | 102 | 54 | 1.401 | 2.82 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.97' | |
| AT5G42340 | PUB15 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.12 | ||||
| AT5G42340 | PUB15 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G42340 | PUB15 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G42340 | PUB15 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||
| AT5G42340 | PUB15 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G42340 | PUB15 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G42340 | PUB15 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G42340 | PUB15 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G42340 | PUB15 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT5G42330 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0331 | 0.0 | 181 | 85 | 161 | 197 | 68.05% | 55.03% | 266 | 358 | 1.093 | 4.33 x 10-3 | TAIR10 | ||
| AT5G42330 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.816 | 148 | 62 | 232 | 422 | 70.48% | 64.53% | 210 | 654 | 0.224 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G42330 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.218 | 171 | 38 | 129 | 151 | 81.82% | 53.93% | 209 | 280 | 2.144 | 2.1 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G42330 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.573 | 769 | 398 | 191 | 439 | 65.90% | 69.68% | 1167 | 630 | 0.266 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G42330 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0319 | 0.0 | 543 | 283 | 199 | 320 | 65.74% | 61.66% | 826 | 519 | 0.168 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G42330 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.805 | 173 | 47 | 134 | 134 | 78.64% | 50.00% | 220 | 268 | 2.103 | 2.21 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G42330 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 173 | 115 | 220 | 596 | 60.07% | 73.04% | 288 | 816 | 1.22 | 2.15 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G42330 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 2.23 x 10-13 | 2.213 | 174 | 23 | 128 | 284 | 88.32% | 68.93% | 197 | 412 | 1.798 | 2.05 x 10-7 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G42330 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.77 x 10-5 | 1.351 | 281 | 116 | 26 | 110 | 70.78% | 80.88% | 397 | 136 | 0.0 | 0.0294 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G42325 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | 1.0 | TAIR10 | |||||
| AT5G42325 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G42325 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G42325 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G42325 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G42325 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G42325 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G42325 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G42325 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G42320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.824 | 50 | 35 | 61 | 202 | 58.82% | 76.81% | 85 | 263 | 1.135 | 6.78 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.61 | ||
| AT5G42320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.205 | 74 | 44 | 108 | 356 | 62.71% | 76.72% | 118 | 464 | 1.091 | 0.0091 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | ||
| AT5G42320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.21 x 10-11 | 1.593 | 378 | 143 | 129 | 458 | 72.55% | 78.02% | 521 | 587 | 0.0 | 0.0488 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | |
| AT5G42320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.277 | 204 | 127 | 53 | 177 | 61.63% | 76.96% | 331 | 230 | 1.228 | 8.78 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | ||
| AT5G42320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 4.66 x 10-5 | 1.132 | 451 | 271 | 243 | 886 | 62.47% | 78.48% | 722 | 1129 | 1.636 | 4.13 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | |
| AT5G42320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 4.56 x 10-13 | 1.75 | 315 | 149 | 106 | 525 | 67.89% | 83.20% | 464 | 631 | 1.566 | 1.32 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | |
| AT5G42320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | ||||
| AT5G42320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 10 | 100.00% | 0 | 10 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | ||||
| AT5G42320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.61' | |||||
| AT5G42310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.298 | 64 | 27 | 73 | 82 | 70.33% | 52.90% | 91 | 155 | 0.0 | 0.0221 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .08 | ||
| AT5G42310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0116 | 1.103 | 55 | 40 | 158 | 227 | 57.89% | 58.96% | 95 | 385 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | ||
| AT5G42310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.26 x 10-28 | 13.652 | 162 | 0 | 71 | 123 | 100.00% | 63.40% | 162 | 194 | 18.195 | 8.47 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |
| AT5G42310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.4 x 10-4 | 1.254 | 255 | 61 | 37 | 86 | 80.70% | 69.92% | 316 | 123 | 0.0697 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | ||
| AT5G42310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 0.0 | 14.051 | 144 | 19 | 2 | 88 | 88.34% | 97.78% | 163 | 90 | 0.0 | 0.0125 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |
| AT5G42310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.455 | 39 | 10 | 33 | 51 | 79.59% | 60.71% | 49 | 84 | 0.0511 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |||
| AT5G42310 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.602 | 67 | 25 | 19 | 39 | 72.83% | 67.24% | 92 | 58 | 0.648 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | |||
| AT5G42310 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 2.91 x 10-24 | 35.238 | 26 | 0 | 0 | 80 | 100.00% | 100.00% | 26 | 80 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | ||
| AT5G42310 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.79 x 10-4 | 1.482 | 57 | 53 | 31 | 33 | 51.82% | 51.56% | 110 | 64 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.08' | ||
| AT5G42300 | UBL5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.517 | 88 | 21 | 70 | 89 | 80.73% | 55.97% | 109 | 159 | 1.506 | 1.16 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .23 | |
| AT5G42300 | UBL5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.43 | 70 | 19 | 216 | 300 | 78.65% | 58.14% | 89 | 516 | 1.349 | 8.41 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' |