| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G55915 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 15 | 11 | 38 | 95 | 57.69% | 71.43% | 26 | 133 | 0.277 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.63' | |||
| AT1G55915 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 2.68 x 10-8 | 2.995 | 32 | 0 | 21 | 50 | 100.00% | 70.42% | 32 | 71 | 2.113 | 3.21 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.63' | |
| AT1G55910 | ZIP11 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 8.78 x 10-10 | 4.896 | 79 | 0 | 10 | 20 | 100.00% | 66.67% | 79 | 30 | 4.896 | 1.88 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.31' |
| AT1G55910 | ZIP11 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.23 x 10-6 | 1.665 | 212 | 14 | 77 | 79 | 93.81% | 50.64% | 226 | 156 | 6.327 | 9.62 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.31' |
| AT1G55910 | ZIP11 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.02 x 10-9 | 2.354 | 165 | 15 | 36 | 77 | 91.67% | 68.14% | 180 | 113 | 2.058 | 2.48 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.31' |
| AT1G55910 | ZIP11 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.15 x 10-3 | 1.226 | 68 | 11 | 118 | 21 | 86.08% | 15.11% | 79 | 139 | 11.716 | 1.74 x 10-25 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.31' |
| AT1G55910 | ZIP11 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 0.0 | 71.154 | 42 | 0 | 0 | 100 | 100.00% | 100.00% | 42 | 100 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.31' | |
| AT1G55910 | ZIP11 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 8.85 x 10-7 | 2.167 | 28 | 0 | 25 | 48 | 100.00% | 65.75% | 28 | 73 | 2.352 | 1.58 x 10-4 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.31' |
| AT1G55910 | ZIP11 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 7.43 x 10-4 | 1.235 | 63 | 11 | 25 | 64 | 85.14% | 71.91% | 74 | 89 | 0.128 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .31 | |
| AT1G55910 | ZIP11 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.38 x 10-6 | 4.632 | 130 | 0 | 4 | 7 | 100.00% | 63.64% | 130 | 11 | 6.05 | 3.96 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.31' |
| AT1G55910 | ZIP11 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.16 x 10-9 | 2.614 | 260 | 42 | 12 | 52 | 86.09% | 81.25% | 302 | 64 | 0.567 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.31' | |
| AT1G55900 | TIM50 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 110 | 63 | 25 | 55 | 63.58% | 68.75% | 173 | 80 | 0.724 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' | ||
| AT1G55900 | TIM50 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.36 x 10-3 | 1.045 | 303 | 88 | 205 | 374 | 77.49% | 64.59% | 391 | 579 | 1.256 | 8.01 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' |
| AT1G55900 | TIM50 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.415 | 152 | 59 | 70 | 133 | 72.04% | 65.52% | 211 | 203 | 0.222 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' | ||
| AT1G55900 | TIM50 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.23 x 10-4 | 1.148 | 342 | 105 | 238 | 168 | 76.51% | 41.38% | 447 | 406 | 3.046 | 4.18 x 10-25 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' |
| AT1G55900 | TIM50 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.141 | 439 | 179 | 265 | 533 | 71.04% | 66.79% | 618 | 798 | 0.186 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' | ||
| AT1G55900 | TIM50 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.454 | 158 | 43 | 112 | 153 | 78.61% | 57.74% | 201 | 265 | 1.508 | 1.02 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.12 | |
| AT1G55900 | TIM50 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.83 x 10-7 | 1.592 | 224 | 47 | 46 | 118 | 82.66% | 71.95% | 271 | 164 | 0.0 | 0.0165 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' |
| AT1G55900 | TIM50 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.119 | 507 | 17 | 132 | 31 | 96.76% | 19.02% | 524 | 163 | 53.341 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' | |
| AT1G55900 | TIM50 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | paternally biased | not imprinted | 1.9 x 10-14 | 2.26 | 212 | 143 | 191 | 149 | 59.72% | 43.82% | 355 | 340 | 1.242 | 5.97 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' |
| AT1G55890 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.109 | 380 | 36 | 192 | 47 | 91.35% | 19.67% | 416 | 239 | 22.337 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||
| AT1G55890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 1.17 x 10-15 | 5.501 | 140 | 1 | 56 | 71 | 99.29% | 55.91% | 141 | 127 | 13.688 | 4.08 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT1G55890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.737 | 488 | 35 | 353 | 118 | 93.31% | 25.05% | 523 | 471 | 24.08 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.12 | ||
| AT1G55890 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.16 x 10-18 | 8.121 | 614 | 0 | 295 | 77 | 100.00% | 20.70% | 614 | 372 | 476.823 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT1G55890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 497 | 99 | 137 | 109 | 83.39% | 44.31% | 596 | 246 | 3.959 | 1.98 x 10-27 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||
| AT1G55890 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0207 | 0.0 | 639 | 106 | 346 | 319 | 85.77% | 47.97% | 745 | 665 | 4.575 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT1G55890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0218 | 0.0 | 211 | 74 | 20 | 54 | 74.04% | 72.97% | 285 | 74 | 0.993 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||
| AT1G55890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0346 | 0.0 | 547 | 75 | 585 | 229 | 87.94% | 28.13% | 622 | 814 | 12.572 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT1G55890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0451 | 0.0 | 494 | 32 | 288 | 43 | 93.92% | 12.99% | 526 | 331 | 52.659 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT1G55880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0729 | 253 | 36 | 186 | 152 | 87.54% | 44.97% | 289 | 338 | 4.906 | 2.4 x 10-29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | ||
| AT1G55880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.305 | 26 | 19 | 10 | 17 | 57.78% | 62.96% | 45 | 27 | 0.915 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | |||
| AT1G55880 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0478 | 0.0 | 460 | 107 | 369 | 455 | 81.13% | 55.22% | 567 | 824 | 2.464 | 2.03 x 10-23 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | |
| AT1G55880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.215 | 220 | 61 | 353 | 491 | 78.29% | 58.18% | 281 | 844 | 1.705 | 4.72 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | ||
| AT1G55880 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0337 | 0.0 | 330 | 27 | 226 | 118 | 92.44% | 34.30% | 357 | 344 | 12.694 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | |
| AT1G55880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 34 | 0 | 34 | 0 | 100.00% | 0.00% | 34 | 34 | 78.337 | 3.9 x 10-19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | ||
| AT1G55880 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.041 | 0.0 | 374 | 86 | 169 | 105 | 81.30% | 38.32% | 460 | 274 | 4.345 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | |
| AT1G55880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.08 x 10-3 | 1.108 | 264 | 45 | 285 | 345 | 85.44% | 54.76% | 309 | 630 | 3.024 | 1.22 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.71 | |
| AT1G55880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.446 | 73 | 28 | 23 | 21 | 72.28% | 47.73% | 101 | 44 | 1.034 | 0.0292 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | ||
| AT1G55870 | AHG2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 60 | 21 | 18 | 20 | 74.07% | 52.63% | 81 | 38 | 0.106 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | ||
| AT1G55870 | AHG2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.766 | 185 | 45 | 128 | 137 | 80.43% | 51.70% | 230 | 265 | 2.184 | 1.19 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |
| AT1G55870 | AHG2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.433 | 32 | 25 | 4 | 7 | 56.14% | 63.64% | 57 | 11 | 0.857 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | ||
| AT1G55870 | AHG2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0186 | 0.0 | 158 | 38 | 94 | 46 | 80.61% | 32.86% | 196 | 140 | 4.206 | 4.37 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' |
| AT1G55870 | AHG2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.337 | 342 | 69 | 222 | 219 | 83.21% | 49.66% | 411 | 441 | 3.222 | 1.18 x 10-24 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |
| AT1G55870 | AHG2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 3.36 x 10-4 | 1.299 | 115 | 10 | 73 | 85 | 92.00% | 53.80% | 125 | 158 | 3.831 | 3.09 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .3 |
| AT1G55870 | AHG2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | PEG | not imprinted | 5.83 x 10-8 | 4.64 | 7 | 22 | 93 | 82 | 24.14% | 46.86% | 29 | 175 | 0.0 | 0.0373 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' |
| AT1G55870 | AHG2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.145 | 229 | 33 | 93 | 33 | 87.40% | 26.19% | 262 | 126 | 9.169 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |
| AT1G55870 | AHG2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.219 | 82 | 21 | 101 | 72 | 79.61% | 41.62% | 103 | 173 | 2.521 | 1.52 x 10-9 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |
| AT1G55860 | UPL1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.3 | 791 | 282 | 583 | 918 | 73.72% | 61.16% | 1073 | 1501 | 1.402 | 9.46 x 10-11 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | |
| AT1G55860 | UPL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.351 | 440 | 457 | 265 | 999 | 49.05% | 79.03% | 897 | 1264 | 3.001 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | |
| AT1G55860 | UPL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0209 | 0.0 | 186 | 33 | 208 | 242 | 84.93% | 53.78% | 219 | 450 | 2.786 | 3.81 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.37 |
| AT1G55860 | UPL1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.51 x 10-5 | 1.118 | 1492 | 389 | 750 | 561 | 79.32% | 42.79% | 1881 | 1311 | 4.111 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' |
| AT1G55860 | UPL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0135 | 0.0 | 366 | 135 | 600 | 1189 | 73.05% | 66.46% | 501 | 1789 | 1.018 | 0.0153 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' |
| AT1G55860 | UPL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0234 | 0.0 | 678 | 327 | 184 | 475 | 67.46% | 72.08% | 1005 | 659 | 0.142 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | |
| AT1G55860 | UPL1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.38 x 10-3 | 1.032 | 1085 | 425 | 948 | 1854 | 71.85% | 66.17% | 1510 | 2802 | 1.079 | 4.67 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' |
| AT1G55860 | UPL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.113 | 300 | 268 | 160 | 703 | 52.82% | 81.46% | 568 | 863 | 2.805 | 1.3 x 10-29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | |
| AT1G55860 | UPL1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 9.34 x 10-8 | 1.229 | 823 | 253 | 446 | 870 | 76.49% | 66.11% | 1076 | 1316 | 1.292 | 6.32 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' |
| AT1G55850 | CSLE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 7 | 100.00% | 0 | 7 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||
| AT1G55850 | CSLE1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 11 | 1 | 2 | 2 | 91.67% | 50.00% | 12 | 4 | 0.252 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | ||
| AT1G55850 | CSLE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 13 | 0 | 0 | 0 | 100.00% | 13 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||
| AT1G55850 | CSLE1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | ||||
| AT1G55850 | CSLE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | ||||
| AT1G55850 | CSLE1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | ||||
| AT1G55850 | CSLE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 1 | 0 | 2 | 2 | 100.00% | 50.00% | 1 | 4 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .17 | ||
| AT1G55850 | CSLE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 15 | 2 | 1 | 0 | 88.24% | 0.00% | 17 | 1 | 0.353 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | ||
| AT1G55850 | CSLE1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 8 | 0 | 4 | 0 | 100.00% | 0.00% | 8 | 4 | 2.168 | 6.06 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |
| AT1G55840 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.2' | |||||
| AT1G55840 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0124 | 0.0 | 152 | 31 | 37 | 66 | 83.06% | 64.08% | 183 | 103 | 1.255 | 2.39 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.2' | |
| AT1G55840 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 46 | 0 | 18 | 0 | 100.00% | 0.00% | 46 | 18 | 56.11 | 1.54 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.2' | ||
| AT1G55840 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.2' | |||||
| AT1G55840 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 4.02 x 10-14 | 2.693 | 118 | 52 | 26 | 255 | 69.41% | 90.75% | 170 | 281 | 2.092 | 8.21 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.2' | |
| AT1G55840 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.2 | |||||
| AT1G55840 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 7.72 x 10-21 | 22.922 | 41 | 0 | 0 | 33 | 100.00% | 100.00% | 41 | 33 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.2' | ||
| AT1G55840 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 25 | 100.00% | 0 | 25 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.2' | ||||
| AT1G55840 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 9 | 100.00% | 0 | 9 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.2' | ||||
| AT1G55830 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 4.37 x 10-12 | 7.827 | 21 | 0 | 0 | 22 | 100.00% | 100.00% | 21 | 22 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.92' | ||
| AT1G55830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 5 | 0 | 0 | 0.00% | 5 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.92' | ||||
| AT1G55830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 7 | 0 | 6 | 0 | 100.00% | 0.00% | 7 | 6 | 2.846 | 2.22 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .92 | ||
| AT1G55830 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 64 | 0 | 20 | 0 | 100.00% | 0.00% | 64 | 20 | 86.74 | 2.17 x 10-19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.92' | ||
| AT1G55830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 0.923 | 12 | 1 | 13 | 10 | 92.31% | 43.48% | 13 | 23 | 1.166 | 0.0197 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.92' | ||
| AT1G55830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 1.0 | 11 | 0 | 15 | 0 | 100.00% | 0.00% | 11 | 15 | 11.181 | 7.73 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.92' | ||
| AT1G55830 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0124 | 0.0 | 47 | 8 | 31 | 63 | 85.45% | 67.02% | 55 | 94 | 0.0 | 0.049 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.92' | |
| AT1G55830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 33 | 0 | 0 | 0 | 100.00% | 33 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.92' | ||||
| AT1G55830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.92' | ||||
| AT1G55820 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 5.09 x 10-16 | 7.007 | 125 | 0 | 42 | 54 | 100.00% | 56.25% | 125 | 96 | 16.955 | 4.6 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.57' | |
| AT1G55820 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.955 | 217 | 113 | 149 | 323 | 65.76% | 68.43% | 330 | 472 | 0.623 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.57' | |||
| AT1G55820 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | paternally biased | not imprinted | 4.04 x 10-10 | 2.465 | 91 | 51 | 151 | 74 | 64.08% | 32.89% | 142 | 225 | 1.962 | 1.69 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.57' | |
| AT1G55820 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.83 x 10-16 | 5.981 | 112 | 0 | 138 | 143 | 100.00% | 50.89% | 112 | 281 | 22.28 | 3.29 x 10-26 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.57' | |
| AT1G55820 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 1.27 x 10-7 | 2.024 | 83 | 20 | 7 | 48 | 80.58% | 87.27% | 103 | 55 | 0.455 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.57' | ||
| AT1G55820 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.65 x 10-5 | 1.589 | 50 | 0 | 48 | 36 | 100.00% | 42.86% | 50 | 84 | 11.302 | 6.48 x 10-13 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.57' | |
| AT1G55820 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 3.19 x 10-6 | 1.576 | 101 | 15 | 120 | 239 | 87.07% | 66.57% | 116 | 359 | 1.589 | 5.14 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.57 | |
| AT1G55820 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.526 | 85 | 36 | 89 | 183 | 70.25% | 67.28% | 121 | 272 | 0.775 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.57' | |||
| AT1G55820 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 129 | 48 | 63 | 98 | 72.88% | 60.87% | 177 | 161 | 0.0684 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.57' | |||
| AT1G55810 | UKL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 2095 | 739 | 643 | 905 | 73.92% | 58.46% | 2834 | 1548 | 1.674 | 5.27 x 10-24 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.45' | |
| AT1G55810 | UKL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.813 | 555 | 268 | 2746 | 5128 | 67.44% | 65.13% | 823 | 7874 | 0.302 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.45' | ||
| AT1G55810 | UKL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 9.86 x 10-28 | 1.303 | 4085 | 1798 | 3184 | 8044 | 69.44% | 71.64% | 5883 | 11228 | 1.01 | 4.85 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.45' |
| AT1G55810 | UKL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.93 x 10-6 | 1.068 | 4075 | 2321 | 3435 | 6684 | 63.71% | 66.05% | 6396 | 10119 | 1.011 | 3.31 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.45' |
| AT1G55810 | UKL3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.965 | 2041 | 1306 | 1386 | 3593 | 60.98% | 72.16% | 3347 | 4979 | 1.455 | 2.12 x 10-25 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.45' | |
| AT1G55810 | UKL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 3.16 x 10-25 | 1.741 | 819 | 187 | 1442 | 2863 | 81.41% | 66.50% | 1006 | 4305 | 1.767 | 2.08 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.45 |
| AT1G55810 | UKL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0 | 1.559 | 4768 | 2500 | 1419 | 5164 | 65.60% | 78.44% | 7268 | 6583 | 1.714 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.45' |
| AT1G55810 | UKL3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 x 10-30 | 1.544 | 3169 | 1213 | 1766 | 1531 | 72.32% | 46.44% | 4382 | 3297 | 2.634 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.45' |