| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G45200 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' | |||||
| AT5G45200 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' | |||||
| AT5G45200 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' | |||||
| AT5G45200 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.17' | |||||
| AT5G45190 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 3.87 x 10-5 | 1.42 | 80 | 17 | 85 | 221 | 82.47% | 72.22% | 97 | 306 | 0.105 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.45 | ||
| AT5G45190 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0376 | 0.0 | 73 | 83 | 105 | 285 | 46.79% | 73.08% | 156 | 390 | 1.805 | 6.66 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |
| AT5G45190 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.07 x 10-18 | 9.536 | 129 | 0 | 25 | 46 | 100.00% | 64.79% | 129 | 71 | 11.267 | 7.78 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |
| AT5G45190 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.3 | 339 | 176 | 84 | 221 | 65.83% | 72.46% | 515 | 305 | 0.146 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |||
| AT5G45190 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0023 | 1.064 | 381 | 122 | 271 | 223 | 75.75% | 45.14% | 503 | 494 | 2.594 | 1.74 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |
| AT5G45190 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.78 x 10-4 | 1.128 | 323 | 90 | 165 | 316 | 78.21% | 65.70% | 413 | 481 | 1.23 | 9.17 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |
| AT5G45190 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.073 | 575 | 271 | 358 | 826 | 67.97% | 69.76% | 846 | 1184 | 0.585 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |||
| AT5G45190 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 9.64 x 10-20 | 2.362 | 318 | 94 | 79 | 354 | 77.18% | 81.76% | 412 | 433 | 0.14 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | ||
| AT5G45190 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.41 x 10-4 | 1.097 | 307 | 228 | 26 | 152 | 57.38% | 85.39% | 535 | 178 | 2.421 | 3.19 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |
| AT5G45180 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .17 | |||||
| AT5G45180 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | ||||
| AT5G45180 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||||
| AT5G45180 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||||
| AT5G45180 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||||
| AT5G45180 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||||
| AT5G45180 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||
| AT5G45180 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||||
| AT5G45180 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' | |||||
| AT5G45170 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.654 | 62 | 23 | 63 | 116 | 72.94% | 64.80% | 85 | 179 | 0.363 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .68 | |||
| AT5G45170 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.345 | 45 | 15 | 161 | 303 | 75.00% | 65.30% | 60 | 464 | 0.247 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |||
| AT5G45170 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.917 | 20 | 18 | 54 | 163 | 52.63% | 75.12% | 38 | 217 | 1.069 | 9.24 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | ||
| AT5G45170 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0953 | 84 | 46 | 16 | 69 | 64.62% | 81.18% | 130 | 85 | 0.0 | 0.0341 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | ||
| AT5G45170 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | PEG | not imprinted | 1.69 x 10-7 | 9.967 | 17 | 17 | 28 | 1 | 50.00% | 3.45% | 34 | 29 | 2.492 | 8.12 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |
| AT5G45170 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.573 | 39 | 19 | 27 | 39 | 67.24% | 59.09% | 58 | 66 | 0.444 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |||
| AT5G45170 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 5.15 x 10-11 | 1.874 | 255 | 32 | 154 | 255 | 88.85% | 62.35% | 287 | 409 | 2.735 | 7.33 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |
| AT5G45170 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.511 | 149 | 51 | 32 | 55 | 74.50% | 63.22% | 200 | 87 | 0.0895 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | |||
| AT5G45170 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.274 | 255 | 22 | 232 | 57 | 92.06% | 19.72% | 277 | 289 | 22.943 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.68' | ||
| AT5G45160 | RL2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.594 | 83 | 51 | 117 | 350 | 61.94% | 74.95% | 134 | 467 | 1.054 | 0.0137 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.04 | |
| AT5G45160 | RL2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.364 | 124 | 95 | 183 | 686 | 56.62% | 78.94% | 219 | 869 | 1.869 | 6.44 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.04' | |
| AT5G45160 | RL2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.292 | 163 | 154 | 96 | 301 | 51.42% | 75.82% | 317 | 397 | 1.891 | 4.37 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.04' | |
| AT5G45160 | RL2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.899 | 259 | 198 | 73 | 242 | 56.67% | 76.83% | 457 | 315 | 1.623 | 7.28 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.04' | |
| AT5G45160 | RL2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.016 | 1.017 | 33 | 28 | 46 | 64 | 54.10% | 58.18% | 61 | 110 | 0.732 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.04' | |
| AT5G45160 | RL2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 9.19 x 10-3 | 0.0 | 87 | 58 | 23 | 126 | 60.00% | 84.56% | 145 | 149 | 1.688 | 5.81 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.04' |
| AT5G45160 | RL2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.175 | 489 | 251 | 381 | 920 | 66.08% | 70.71% | 740 | 1301 | 0.0753 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.04' | ||
| AT5G45160 | RL2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 9.01 x 10-11 | 2.156 | 109 | 38 | 26 | 170 | 74.15% | 86.73% | 147 | 196 | 1.048 | 7.65 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.04' |
| AT5G45160 | RL2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.85 x 10-23 | 2.371 | 501 | 71 | 206 | 419 | 87.59% | 67.04% | 572 | 625 | 2.292 | 2.83 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.04' |
| AT5G45150 | RTL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | ||||
| AT5G45150 | RTL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G45150 | RTL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G45150 | RTL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 0.134 | 22 | 9 | 2 | 16 | 70.97% | 88.89% | 31 | 18 | 0.37 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G45150 | RTL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G45150 | RTL3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 15 | 0 | 0 | 0 | 100.00% | 15 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G45150 | RTL3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.436 | 12 | 15 | 5 | 46 | 44.44% | 90.20% | 27 | 51 | 2.242 | 9.17 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G45150 | RTL3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | paternally biased | not imprinted | 3.56 x 10-5 | 6.916 | 53 | 32 | 17 | 0 | 62.35% | 0.00% | 85 | 17 | 4.743 | 1.61 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT5G45150 | RTL3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 0 | 18 | 0 | 16 | 0.00% | 100.00% | 18 | 16 | 19.516 | 7.74 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G45140 | NRPC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.889 | 7 | 5 | 5 | 7 | 58.33% | 58.33% | 12 | 12 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.16 | ||
| AT5G45140 | NRPC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.361 | 28 | 6 | 15 | 24 | 82.35% | 61.54% | 34 | 39 | 0.133 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | ||
| AT5G45140 | NRPC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |||
| AT5G45140 | NRPC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.933 | 91 | 34 | 50 | 65 | 72.80% | 56.52% | 125 | 115 | 0.0 | 0.0371 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |
| AT5G45140 | NRPC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 6.0 x 10-11 | 2.797 | 147 | 6 | 53 | 76 | 96.08% | 58.91% | 153 | 129 | 5.441 | 1.62 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' |
| AT5G45140 | NRPC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 30 | 16 | 0 | 0 | 65.22% | 46 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |||
| AT5G45140 | NRPC2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.793 | 164 | 91 | 71 | 174 | 64.31% | 71.02% | 255 | 245 | 0.237 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | ||
| AT5G45140 | NRPC2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.64 x 10-5 | 1.708 | 124 | 59 | 0 | 17 | 67.76% | 100.00% | 183 | 17 | 1.546 | 6.02 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' |
| AT5G45140 | NRPC2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.69 x 10-4 | 1.145 | 48 | 68 | 0 | 36 | 41.38% | 100.00% | 116 | 36 | 9.194 | 1.44 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' |
| AT5G45130 | RHA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0281 | 0.0 | 201 | 77 | 221 | 499 | 72.30% | 69.31% | 278 | 720 | 0.587 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .2 | |
| AT5G45130 | RHA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.618 | 296 | 185 | 185 | 506 | 61.54% | 73.23% | 481 | 691 | 1.203 | 1.35 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |
| AT5G45130 | RHA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 12 | 110 | 90.16% | 0 | 122 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |||
| AT5G45130 | RHA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |||
| AT5G45130 | RHA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||||
| AT5G45130 | RHA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||||
| AT5G45130 | RHA1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0728 | 601 | 290 | 363 | 854 | 67.45% | 70.17% | 891 | 1217 | 0.32 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||
| AT5G45130 | RHA1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 0.0 | 72.731 | 108 | 1 | 0 | 59 | 99.08% | 100.00% | 109 | 59 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |
| AT5G45130 | RHA1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.14 x 10-17 | 8.637 | 164 | 0 | 41 | 50 | 100.00% | 54.95% | 164 | 91 | 23.231 | 7.1 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' |
| AT5G45120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .1 | ||||
| AT5G45120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 2 | 3 | 60.00% | 0 | 5 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.1' | ||||
| AT5G45120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.1' | |||||
| AT5G45120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.1' | ||||
| AT5G45120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.1' | |||||
| AT5G45120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.1' | |||||
| AT5G45120 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 1 | 0 | 4 | 0.00% | 100.00% | 1 | 4 | 0.343 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.1' | |||
| AT5G45120 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.1' | |||||
| AT5G45120 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.1' | |||||
| AT5G45116 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT5G45116 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G45116 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G45116 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G45116 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G45116 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G45116 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G45116 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G45116 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G45113 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | not imprinted | 0.768 | 3 | 1 | 2 | 14 | 75.00% | 87.50% | 4 | 16 | 0.7 | TAIR10 | ||||
| AT5G45113 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 0 | 3 | 2 | 48 | 0.00% | 96.00% | 3 | 50 | 5.021 | 1.48 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G45113 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 2 | 34 | 0 | 25 | 5.56% | 100.00% | 36 | 25 | 29.359 | 1.57 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G45113 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.414 | 3 | 32 | 0 | 47 | 8.57% | 100.00% | 35 | 47 | 42.436 | 2.18 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G45113 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 0 | 10 | 0 | 54 | 0.00% | 100.00% | 10 | 54 | 36.593 | 2.2 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G45113 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 0 | 20 | 0 | 22 | 0.00% | 100.00% | 20 | 22 | 29.817 | 8.55 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G45113 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0403 | 0.0 | 117 | 21 | 68 | 91 | 84.78% | 57.23% | 138 | 159 | 1.921 | 1.33 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G45113 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 51 | 21 | 14 | 22 | 70.83% | 61.11% | 72 | 36 | 0.462 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G45113 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 119 | 24 | 0 | 0 | 83.22% | 143 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G45110 | NPR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.87 x 10-5 | 1.171 | 455 | 161 | 552 | 1211 | 73.86% | 68.69% | 616 | 1763 | 0.0 | 0.0438 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .36 |
| AT5G45110 | NPR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.85 x 10-6 | 1.157 | 828 | 319 | 1546 | 3330 | 72.19% | 68.29% | 1147 | 4876 | 0.0 | 0.0264 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.36' |
| AT5G45110 | NPR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 1.892 | 3403 | 736 | 801 | 1546 | 82.22% | 65.87% | 4139 | 2347 | 2.031 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.36' |
| AT5G45110 | NPR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.91 x 10-15 | 1.481 | 2521 | 533 | 442 | 685 | 82.55% | 60.78% | 3054 | 1127 | 2.467 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.36' |
| AT5G45110 | NPR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0118 | 1.068 | 1448 | 254 | 151 | 65 | 85.08% | 30.09% | 1702 | 216 | 8.676 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.36' |
| AT5G45110 | NPR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 7.42 x 10-5 | 1.171 | 876 | 77 | 390 | 238 | 91.92% | 37.90% | 953 | 628 | 12.578 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.36' |