| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G45410 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 7.79 x 10-7 | 1.188 | 1951 | 713 | 388 | 828 | 73.24% | 68.09% | 2664 | 1216 | 1.043 | 5.22 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT5G45410 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.16 x 10-5 | 1.389 | 818 | 273 | 148 | 96 | 74.98% | 39.34% | 1091 | 244 | 3.118 | 1.53 x 10-24 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT5G45410 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.976 | 573 | 78 | 302 | 167 | 88.02% | 35.61% | 651 | 469 | 8.688 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | ||
| AT5G45410 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 7.42 x 10-10 | 1.328 | 719 | 295 | 399 | 1116 | 70.91% | 73.66% | 1014 | 1515 | 0.249 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | ||
| AT5G45410 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 6.1 x 10-17 | 3.22 | 280 | 136 | 9 | 134 | 67.31% | 93.71% | 416 | 143 | 3.038 | 7.2 x 10-11 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT5G45410 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 8.72 x 10-6 | 1.335 | 118 | 59 | 80 | 371 | 66.67% | 82.26% | 177 | 451 | 1.335 | 5.97 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |
| AT5G45400 | RPA70C | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.161 | 172 | 52 | 142 | 237 | 76.79% | 62.53% | 224 | 379 | 1.182 | 0.0012 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.96 | |
| AT5G45400 | RPA70C | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.638 | 354 | 155 | 302 | 490 | 69.55% | 61.87% | 509 | 792 | 1.01 | 0.014 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.96' | |
| AT5G45400 | RPA70C | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0392 | 0.0 | 81 | 24 | 145 | 97 | 77.14% | 40.08% | 105 | 242 | 2.485 | 4.23 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.96' |
| AT5G45400 | RPA70C | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.15 | 748 | 251 | 209 | 219 | 74.87% | 51.17% | 999 | 428 | 2.04 | 1.24 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.96' | |
| AT5G45400 | RPA70C | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0833 | 434 | 103 | 179 | 125 | 80.82% | 41.12% | 537 | 304 | 3.877 | 3.0 x 10-30 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.96' | |
| AT5G45400 | RPA70C | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.109 | 131 | 25 | 56 | 68 | 83.97% | 54.84% | 156 | 124 | 1.985 | 4.21 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.96' | |
| AT5G45400 | RPA70C | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.914 | 124 | 72 | 114 | 283 | 63.27% | 71.28% | 196 | 397 | 0.107 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.96' | ||
| AT5G45400 | RPA70C | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 3.67 x 10-10 | 4.282 | 23 | 0 | 23 | 103 | 100.00% | 81.75% | 23 | 126 | 0.0 | 0.0366 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.96' |
| AT5G45400 | RPA70C | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0682 | 127 | 22 | 23 | 3 | 85.23% | 11.54% | 149 | 26 | 9.033 | 3.97 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.96' | |
| AT5G45390 | CLPP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 3.02 x 10-5 | 1.093 | 1691 | 584 | 1229 | 2187 | 74.33% | 64.02% | 2275 | 3416 | 1.381 | 2.38 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.25 |
| AT5G45390 | CLPP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.637 | 1129 | 491 | 1910 | 3199 | 69.69% | 62.61% | 1620 | 5109 | 1.167 | 1.1 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT5G45390 | CLPP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.07 x 10-3 | 1.029 | 1100 | 426 | 618 | 748 | 72.08% | 54.76% | 1526 | 1366 | 1.715 | 1.98 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT5G45390 | CLPP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 3245 | 1454 | 857 | 1526 | 69.06% | 64.04% | 4699 | 2383 | 1.084 | 1.47 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT5G45390 | CLPP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0139 | 0.0 | 2193 | 1024 | 917 | 1961 | 68.17% | 68.14% | 3217 | 2878 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT5G45390 | CLPP4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.56 x 10-4 | 1.077 | 1638 | 503 | 1116 | 1059 | 76.51% | 48.69% | 2141 | 2175 | 2.855 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT5G45390 | CLPP4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.68 x 10-9 | 1.128 | 4077 | 1379 | 3026 | 5135 | 74.73% | 62.92% | 5456 | 8161 | 1.567 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT5G45390 | CLPP4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 9.26 x 10-6 | 1.109 | 2283 | 428 | 1039 | 1044 | 84.21% | 50.12% | 2711 | 2083 | 4.394 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT5G45390 | CLPP4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.02 x 10-5 | 1.106 | 3654 | 511 | 1440 | 1058 | 87.73% | 42.35% | 4165 | 2498 | 8.196 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT5G45380 | DUR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .57 | ||||
| AT5G45380 | DUR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||||
| AT5G45380 | DUR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||||
| AT5G45380 | DUR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 1 | 1 | 6 | 50.00% | 85.71% | 2 | 7 | 0.66 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||
| AT5G45380 | DUR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||||
| AT5G45380 | DUR3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||||
| AT5G45380 | DUR3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.247 | 14 | 3 | 0 | 2 | 82.35% | 100.00% | 17 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||
| AT5G45380 | DUR3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||||
| AT5G45380 | DUR3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.57' | ||||
| AT5G45370 | UMAMIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.0 x 10-30 | 13.081 | 67 | 6 | 7 | 155 | 91.78% | 95.68% | 73 | 162 | 0.395 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.99 | |
| AT5G45370 | UMAMIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 66.85 | 80 | 0 | 11 | 256 | 100.00% | 95.88% | 80 | 267 | 0.141 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.99' | |
| AT5G45370 | UMAMIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.46 x 10-19 | 19.516 | 36 | 0 | 0 | 32 | 100.00% | 100.00% | 36 | 32 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.99' | |
| AT5G45370 | UMAMIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.67 x 10-5 | 2.08 | 18 | 0 | 2 | 14 | 100.00% | 87.50% | 18 | 16 | 0.423 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.99' | |
| AT5G45370 | UMAMIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 22 | 100.00% | 0 | 22 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.99' | |||
| AT5G45370 | UMAMIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 9.16 x 10-7 | 4.405 | 5 | 0 | 0 | 52 | 100.00% | 100.00% | 5 | 52 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.99' | |
| AT5G45370 | UMAMIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 77.871 | 497 | 14 | 10 | 276 | 97.26% | 96.50% | 511 | 286 | 0.705 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.99' | |
| AT5G45370 | UMAMIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 0.0425 | 0.0 | 236 | 3 | 0 | 1 | 98.74% | 100.00% | 239 | 1 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.99' | |
| AT5G45370 | UMAMIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.16 x 10-8 | 3.827 | 104 | 0 | 23 | 23 | 100.00% | 50.00% | 104 | 46 | 15.307 | 2.27 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.99' |
| AT5G45360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 3.13 x 10-7 | 1.424 | 247 | 51 | 246 | 456 | 82.89% | 64.96% | 298 | 702 | 1.657 | 5.02 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.43 | |
| AT5G45360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.54 x 10-11 | 1.607 | 314 | 66 | 536 | 1047 | 82.63% | 66.14% | 380 | 1583 | 1.685 | 7.11 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' | |
| AT5G45360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.12 x 10-11 | 1.43 | 876 | 225 | 302 | 590 | 79.56% | 66.14% | 1101 | 892 | 1.499 | 5.78 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' | |
| AT5G45360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' | |||||
| AT5G45360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' | |||||
| AT5G45360 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' | |||||
| AT5G45360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.04 x 10-6 | 1.175 | 1046 | 350 | 650 | 1268 | 74.93% | 66.11% | 1396 | 1918 | 1.235 | 2.25 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' | |
| AT5G45360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.13 x 10-3 | 1.015 | 877 | 312 | 279 | 530 | 73.76% | 65.51% | 1189 | 809 | 1.125 | 1.54 x 10-4 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' | |
| AT5G45360 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.24 x 10-6 | 1.162 | 1467 | 243 | 1298 | 586 | 85.79% | 31.10% | 1710 | 1884 | 10.591 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' | |
| AT5G45350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0174 | 0.0 | 535 | 152 | 445 | 675 | 77.87% | 60.27% | 687 | 1120 | 1.72 | 6.33 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .23 | |
| AT5G45350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 6.1 x 10-13 | 1.468 | 1215 | 297 | 320 | 597 | 80.36% | 65.10% | 1512 | 917 | 1.687 | 1.57 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |
| AT5G45350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 6.62 x 10-13 | 7.725 | 127 | 0 | 11 | 21 | 100.00% | 65.62% | 127 | 32 | 8.478 | 1.16 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |
| AT5G45350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0447 | 0.0 | 75 | 15 | 24 | 47 | 83.33% | 66.20% | 90 | 71 | 0.0544 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | ||
| AT5G45350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 6.41 x 10-3 | 0.0 | 175 | 76 | 18 | 68 | 69.72% | 79.07% | 251 | 86 | 0.163 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | ||
| AT5G45350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.14 x 10-7 | 1.716 | 104 | 80 | 17 | 196 | 56.52% | 92.02% | 184 | 213 | 4.061 | 3.55 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |
| AT5G45350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.43 x 10-11 | 1.483 | 653 | 183 | 249 | 566 | 78.11% | 69.45% | 836 | 815 | 1.148 | 2.67 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |
| AT5G45350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.29 x 10-4 | 1.232 | 261 | 10 | 64 | 34 | 96.31% | 34.69% | 271 | 98 | 17.461 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |
| AT5G45350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.62 x 10-6 | 1.513 | 104 | 12 | 65 | 111 | 89.66% | 63.07% | 116 | 176 | 2.076 | 2.9 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |
| AT5G45340 | CYP707A3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 94 | 33 | 88 | 132 | 74.02% | 60.00% | 127 | 220 | 0.0 | 0.0285 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .38 | |
| AT5G45340 | CYP707A3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.214 | 162 | 28 | 286 | 270 | 85.26% | 48.56% | 190 | 556 | 3.485 | 4.0 x 10-19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.38' | |
| AT5G45340 | CYP707A3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.977 | 503 | 78 | 119 | 72 | 86.57% | 37.70% | 581 | 191 | 6.276 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.38' | |
| AT5G45340 | CYP707A3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.31 x 10-3 | 1.118 | 151 | 49 | 29 | 88 | 75.50% | 75.21% | 200 | 117 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.38' | |
| AT5G45340 | CYP707A3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.254 | 123 | 37 | 46 | 37 | 76.88% | 44.58% | 160 | 83 | 1.866 | 1.95 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.38' | |
| AT5G45340 | CYP707A3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.61 x 10-3 | 1.059 | 130 | 49 | 35 | 113 | 72.63% | 76.35% | 179 | 148 | 0.626 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.38' | |
| AT5G45340 | CYP707A3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | maternally biased | not imprinted | 4.58 x 10-15 | 2.064 | 425 | 54 | 146 | 249 | 88.73% | 63.04% | 479 | 395 | 2.838 | 1.95 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.38' |
| AT5G45340 | CYP707A3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 5.89 x 10-17 | 10.021 | 312 | 0 | 54 | 40 | 100.00% | 42.55% | 312 | 94 | 73.053 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.38' |
| AT5G45340 | CYP707A3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.197 | 471 | 82 | 181 | 97 | 85.17% | 34.89% | 553 | 278 | 6.632 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.38' | |
| AT5G45330 | DCP5-L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.987 | 143 | 24 | 99 | 61 | 85.63% | 38.12% | 167 | 160 | 4.583 | 2.68 x 10-18 | TAIR10 | ||
| AT5G45330 | DCP5-L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 235 | 26 | 207 | 89 | 90.04% | 30.07% | 261 | 296 | 10.973 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G45330 | DCP5-L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 101 | 22 | 36 | 29 | 82.11% | 44.62% | 123 | 65 | 2.223 | 7.04 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G45330 | DCP5-L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.458 | 220 | 119 | 53 | 145 | 64.90% | 73.23% | 339 | 198 | 0.152 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G45330 | DCP5-L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 5.67 x 10-6 | 2.248 | 57 | 8 | 0 | 10 | 87.69% | 100.00% | 65 | 10 | 0.684 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G45330 | DCP5-L | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.59 | 67 | 45 | 16 | 32 | 59.82% | 66.67% | 112 | 48 | 0.577 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G45330 | DCP5-L | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.976 | 609 | 54 | 321 | 119 | 91.86% | 27.05% | 663 | 440 | 18.686 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G45330 | DCP5-L | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.6 x 10-7 | 2.491 | 142 | 0 | 91 | 36 | 100.00% | 28.35% | 142 | 127 | 63.673 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT5G45330 | DCP5-L | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 285 | 0 | 53 | 0 | 100.00% | 0.00% | 285 | 53 | 1023.595 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G45320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 3.49 | |||||
| AT5G45320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.49' | ||||
| AT5G45320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 10 | 100.00% | 0 | 10 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.49' | ||||
| AT5G45320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.49' | |||
| AT5G45320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 86 | 100.00% | 0 | 86 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.49' | ||||
| AT5G45320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.49' | |||||
| AT5G45320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | not imprinted | 0.21 | 1 | 0 | 0 | 9 | 100.00% | 100.00% | 1 | 9 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.49' | |||
| AT5G45320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.74 x 10-14 | 11.181 | 33 | 0 | 0 | 20 | 100.00% | 100.00% | 33 | 20 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.49' | ||
| AT5G45320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.14 x 10-6 | 2.287 | 15 | 0 | 0 | 9 | 100.00% | 100.00% | 15 | 9 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.49' | ||
| AT5G45310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.598 | 1 | 0 | 3 | 12 | 100.00% | 80.00% | 1 | 15 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.38 | |||
| AT5G45310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |||||
| AT5G45310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | no data | 1.0 | 42 | 0 | 4 | 0 | 100.00% | 0.00% | 42 | 4 | 11.385 | 1.22 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | ||
| AT5G45310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | ||||
| AT5G45310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |||||
| AT5G45310 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |||||
| AT5G45310 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | ||||
| AT5G45310 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |||||
| AT5G45310 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 15 | 0 | 0.00% | 0 | 15 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | ||||
| AT5G45307 | MIR168B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | |||||
| AT5G45307 | MIR168B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G45307 | MIR168B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G45307 | MIR168B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |