| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G47890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 42 | 5 | 0 | 0 | 89.36% | 47 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||||
| AT5G47890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 16 | 0 | 0 | 0 | 100.00% | 16 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||||
| AT5G47890 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.356 | 2 | 60 | 0 | 254 | 3.23% | 100.00% | 62 | 254 | 533.86 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||
| AT5G47890 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 1.58 x 10-10 | 6.099 | 24 | 0 | 0 | 15 | 100.00% | 100.00% | 24 | 15 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||
| AT5G47890 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 8 | 100.00% | 0 | 8 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||||
| AT5G47880 | ERF1-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.504 | 34 | 12 | 32 | 66 | 73.91% | 67.35% | 46 | 98 | 0.751 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.56 | ||
| AT5G47880 | ERF1-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.488 | 15 | 19 | 60 | 188 | 44.12% | 75.81% | 34 | 248 | 1.528 | 1.21 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.56' | |
| AT5G47880 | ERF1-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.33 x 10-15 | 6.294 | 78 | 0 | 53 | 92 | 100.00% | 63.45% | 78 | 145 | 8.356 | 7.45 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.56' |
| AT5G47880 | ERF1-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 1683 | 1036 | 377 | 920 | 61.90% | 70.93% | 2719 | 1297 | 1.233 | 1.78 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.56' | |
| AT5G47880 | ERF1-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.42 x 10-15 | 1.528 | 836 | 417 | 225 | 893 | 66.72% | 79.87% | 1253 | 1118 | 1.521 | 2.15 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.56' |
| AT5G47880 | ERF1-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 5.02 x 10-6 | 1.248 | 384 | 142 | 142 | 385 | 73.00% | 73.06% | 526 | 527 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.56' | |
| AT5G47880 | ERF1-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 5.27 x 10-4 | 1.051 | 1624 | 626 | 912 | 1756 | 72.18% | 65.82% | 2250 | 2668 | 1.134 | 7.87 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.56' |
| AT5G47880 | ERF1-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.38 x 10-5 | 1.196 | 430 | 136 | 89 | 209 | 75.97% | 70.13% | 566 | 298 | 0.0989 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.56' | |
| AT5G47880 | ERF1-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 8.23 x 10-10 | 1.607 | 398 | 87 | 103 | 230 | 82.06% | 69.07% | 485 | 333 | 1.289 | 3.23 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.56' |
| AT5G47870 | RAD52-2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.858 | 46 | 22 | 44 | 72 | 67.65% | 62.07% | 68 | 116 | 0.716 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.48 | ||
| AT5G47870 | RAD52-2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0153 | 0.0 | 145 | 36 | 107 | 185 | 80.11% | 63.36% | 181 | 292 | 1.278 | 4.92 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.48' |
| AT5G47870 | RAD52-2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | not imprinted | 1.25 x 10-9 | 4.777 | 24 | 0 | 1 | 18 | 100.00% | 94.74% | 24 | 19 | 0.512 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.48' | |
| AT5G47870 | RAD52-2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0172 | 1.02 | 855 | 127 | 234 | 206 | 87.07% | 46.82% | 982 | 440 | 5.266 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.48' |
| AT5G47870 | RAD52-2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 5.48 x 10-5 | 1.309 | 757 | 29 | 250 | 92 | 96.31% | 26.90% | 786 | 342 | 38.65 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.48' |
| AT5G47870 | RAD52-2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 8.2 x 10-10 | 1.741 | 713 | 44 | 223 | 159 | 94.19% | 41.62% | 757 | 382 | 13.697 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.48' |
| AT5G47870 | RAD52-2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.107 | 173 | 222 | 78 | 537 | 43.80% | 87.32% | 395 | 615 | 5.716 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.48' | |
| AT5G47870 | RAD52-2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0173 | 0.0 | 19 | 286 | 14 | 326 | 6.23% | 95.88% | 305 | 340 | 130.367 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.48' |
| AT5G47870 | RAD52-2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.16 x 10-3 | 1.011 | 151 | 364 | 40 | 648 | 29.32% | 94.19% | 515 | 688 | 23.511 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.48' |
| AT5G47860 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 4 | 1 | 16 | 25 | 80.00% | 60.98% | 5 | 41 | 0.824 | TAIR10 | ||||
| AT5G47860 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 2 | 5 | 4 | 42 | 28.57% | 91.30% | 7 | 46 | 2.195 | 2.63 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G47860 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 38 | 87 | 69.60% | 0 | 125 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G47860 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.686 | 199 | 156 | 60 | 219 | 56.06% | 78.49% | 355 | 279 | 1.746 | 2.88 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G47860 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 0 | 31 | 0 | 77 | 0.00% | 100.00% | 31 | 77 | 161.756 | 7.21 x 10-27 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G47860 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.364 | 54 | 29 | 21 | 66 | 65.06% | 75.86% | 83 | 87 | 0.18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT5G47860 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 4.43 x 10-3 | 1.053 | 107 | 74 | 53 | 278 | 59.12% | 83.99% | 181 | 331 | 2.015 | 6.95 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT5G47860 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 34 | 95 | 73.64% | 0 | 129 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G47860 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.13 x 10-19 | 4.289 | 151 | 16 | 22 | 105 | 90.42% | 82.68% | 167 | 127 | 0.0648 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G47850 | CCR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.05 | ||||
| AT5G47850 | CCR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||||
| AT5G47850 | CCR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||||
| AT5G47850 | CCR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 16 | 0 | 2 | 0 | 100.00% | 0.00% | 16 | 2 | 2.168 | 0.0256 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |
| AT5G47850 | CCR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||||
| AT5G47850 | CCR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||||
| AT5G47850 | CCR4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||
| AT5G47850 | CCR4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||||
| AT5G47850 | CCR4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 12 | 100.00% | 0 | 12 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||
| AT5G47840 | AMK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 72 | 60 | 58 | 184 | 54.55% | 76.03% | 132 | 242 | 1.401 | 1.25 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.08 | |
| AT5G47840 | AMK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 76 | 50 | 97 | 254 | 60.32% | 72.36% | 126 | 351 | 0.0 | 0.0326 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | |
| AT5G47840 | AMK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.19 x 10-4 | 1.404 | 21 | 55 | 42 | 135 | 27.63% | 76.27% | 76 | 177 | 3.626 | 2.37 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' |
| AT5G47840 | AMK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.611 | 790 | 373 | 193 | 404 | 67.93% | 67.67% | 1163 | 597 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | ||
| AT5G47840 | AMK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 0.0 | 15.076 | 369 | 138 | 1 | 156 | 72.78% | 99.36% | 507 | 157 | 8.434 | 8.75 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' |
| AT5G47840 | AMK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 5.85 x 10-3 | 1.018 | 488 | 212 | 389 | 495 | 69.71% | 56.00% | 700 | 884 | 1.349 | 7.17 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' |
| AT5G47840 | AMK2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.545 | 739 | 445 | 521 | 1349 | 62.42% | 72.14% | 1184 | 1870 | 1.253 | 1.21 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | |
| AT5G47840 | AMK2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.976 | 180 | 161 | 281 | 1026 | 52.79% | 78.50% | 341 | 1307 | 2.315 | 2.85 x 10-19 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | |
| AT5G47840 | AMK2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 0.0 | 2.857 | 530 | 119 | 231 | 836 | 81.66% | 78.35% | 649 | 1067 | 0.124 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.08' | |
| AT5G47830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.163 | 30 | 11 | 23 | 68 | 73.17% | 74.73% | 41 | 91 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.65 | |||
| AT5G47830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.646 | 42 | 11 | 54 | 72 | 79.25% | 57.14% | 53 | 126 | 1.05 | 0.0165 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | ||
| AT5G47830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.97 x 10-3 | 1.19 | 310 | 189 | 26 | 26 | 62.12% | 50.00% | 499 | 52 | 0.129 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | ||
| AT5G47830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.375 | 159 | 85 | 61 | 97 | 65.16% | 61.39% | 244 | 158 | 0.705 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | |||
| AT5G47830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 74 | 0 | 18 | 0 | 100.00% | 0.00% | 74 | 18 | 90.263 | 9.25 x 10-19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | ||
| AT5G47830 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 3.49 x 10-19 | 10.867 | 54 | 13 | 0 | 73 | 80.60% | 100.00% | 67 | 73 | 2.519 | 7.81 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | |
| AT5G47830 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.963 | 268 | 116 | 187 | 308 | 69.79% | 62.22% | 384 | 495 | 0.0541 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | |||
| AT5G47830 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 6.59 x 10-3 | 0.0 | 141 | 29 | 13 | 30 | 82.94% | 69.77% | 170 | 43 | 0.113 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | ||
| AT5G47830 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.69 x 10-6 | 1.589 | 141 | 35 | 395 | 141 | 80.11% | 26.31% | 176 | 536 | 6.446 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | |
| AT5G47820 | FRA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0462 | 0.0 | 39 | 7 | 25 | 48 | 84.78% | 65.75% | 46 | 73 | 0.0799 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.54 | |
| AT5G47820 | FRA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.3 | 18 | 9 | 26 | 108 | 66.67% | 80.60% | 27 | 134 | 0.217 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.54' | ||
| AT5G47820 | FRA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.54' | |||
| AT5G47820 | FRA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 268 | 135 | 47 | 90 | 66.50% | 65.69% | 403 | 137 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.54' | ||
| AT5G47820 | FRA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 6.74 x 10-7 | 1.665 | 231 | 21 | 60 | 79 | 91.67% | 56.83% | 252 | 139 | 3.841 | 6.97 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.54' |
| AT5G47820 | FRA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 106 | 25 | 46 | 43 | 80.92% | 48.31% | 131 | 89 | 1.948 | 1.34 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.54' | |
| AT5G47820 | FRA1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.368 | 176 | 116 | 151 | 326 | 60.27% | 68.34% | 292 | 477 | 0.0579 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.54' | ||
| AT5G47820 | FRA1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 13 | 163 | 92.61% | 0 | 176 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.54' | |||
| AT5G47820 | FRA1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0025 | 1.174 | 56 | 76 | 108 | 284 | 42.42% | 72.45% | 132 | 392 | 2.029 | 1.75 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.54' |
| AT5G47815 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT5G47815 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G47815 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G47815 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G47815 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G47815 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G47815 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G47815 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G47815 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G47810 | PFK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.696 | 273 | 81 | 343 | 450 | 77.12% | 56.75% | 354 | 793 | 1.743 | 1.64 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.2 | |
| AT5G47810 | PFK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0359 | 0.0 | 469 | 133 | 338 | 505 | 77.91% | 59.91% | 602 | 843 | 1.697 | 3.64 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' |
| AT5G47810 | PFK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 9.18 x 10-5 | 1.179 | 418 | 222 | 173 | 217 | 65.31% | 55.64% | 640 | 390 | 1.045 | 0.0036 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' |
| AT5G47810 | PFK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0618 | 514 | 54 | 171 | 112 | 90.49% | 39.58% | 568 | 283 | 8.665 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | |
| AT5G47810 | PFK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 4.22 x 10-3 | 1.109 | 409 | 8 | 131 | 33 | 98.08% | 20.12% | 417 | 164 | 69.919 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' |
| AT5G47810 | PFK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 3.38 x 10-3 | 1.022 | 357 | 57 | 136 | 148 | 86.23% | 52.11% | 414 | 284 | 3.453 | 7.02 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' |
| AT5G47810 | PFK2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 8.53 x 10-3 | 1.007 | 173 | 189 | 56 | 400 | 47.79% | 87.72% | 362 | 456 | 4.806 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' |
| AT5G47810 | PFK2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0718 | 115 | 95 | 5 | 37 | 54.76% | 88.10% | 210 | 42 | 1.89 | 5.36 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | |
| AT5G47810 | PFK2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 8.24 x 10-18 | 2.633 | 140 | 148 | 211 | 223 | 48.61% | 51.38% | 288 | 434 | 0.537 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.2' | |
| AT5G47800 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.92 | 32 | 36 | 13 | 67 | 47.06% | 83.75% | 68 | 80 | 2.014 | 1.88 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.23 | ||
| AT5G47800 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.83 x 10-12 | 3.942 | 53 | 3 | 25 | 104 | 94.64% | 80.62% | 56 | 129 | 0.0 | 0.0334 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | |
| AT5G47800 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 16 | 39 | 70.91% | 0 | 55 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | ||||
| AT5G47800 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0979 | 221 | 16 | 27 | 19 | 93.25% | 41.30% | 237 | 46 | 6.66 | 1.26 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | ||
| AT5G47800 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.444 | 36 | 16 | 39 | 46 | 69.23% | 54.12% | 52 | 85 | 0.139 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | |||
| AT5G47800 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.861 | 110 | 28 | 39 | 35 | 79.71% | 47.30% | 138 | 74 | 1.844 | 5.99 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | ||
| AT5G47800 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 8.75 x 10-3 | 1.02 | 43 | 133 | 10 | 330 | 24.43% | 97.06% | 176 | 340 | 39.03 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | |
| AT5G47800 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 0 | 18 | 0 | 69 | 0.00% | 100.00% | 18 | 69 | 84.165 | 2.9 x 10-18 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | ||
| AT5G47800 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.97 x 10-13 | 6.305 | 37 | 49 | 0 | 196 | 43.02% | 100.00% | 86 | 196 | 44.233 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | |
| AT5G47790 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.07 | 140 | 51 | 97 | 218 | 73.30% | 69.21% | 191 | 315 | 0.551 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .12 | |||
| AT5G47790 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.13 | 147 | 57 | 153 | 325 | 72.06% | 67.99% | 204 | 478 | 0.454 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.12' | |||
| AT5G47790 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 3.78 x 10-24 | 8.262 | 109 | 1 | 74 | 168 | 99.09% | 69.42% | 110 | 242 | 6.412 | 1.67 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.12' | |
| AT5G47790 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 479 | 179 | 118 | 174 | 72.80% | 59.59% | 658 | 292 | 1.211 | 4.55 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.12' | ||
| AT5G47790 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.28 x 10-5 | 1.418 | 258 | 69 | 162 | 71 | 78.90% | 30.47% | 327 | 233 | 4.957 | 4.0 x 10-30 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.12' |