| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G67530 | PUB49 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.119 | 30 | 36 | 121 | 340 | 45.45% | 73.75% | 66 | 461 | 1.696 | 4.49 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | |
| AT5G67530 | PUB49 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.232 | 89 | 25 | 48 | 79 | 78.07% | 62.20% | 114 | 127 | 0.0 | 0.0115 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | |
| AT5G67530 | PUB49 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.988 | 141 | 96 | 53 | 133 | 59.49% | 71.51% | 237 | 186 | 0.0 | 0.0388 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | |
| AT5G67530 | PUB49 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.36 x 10-4 | 1.244 | 149 | 29 | 21 | 50 | 83.71% | 70.42% | 178 | 71 | 0.0 | 0.0328 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' |
| AT5G67530 | PUB49 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 7.74 x 10-5 | 1.299 | 83 | 32 | 26 | 119 | 72.17% | 82.07% | 115 | 145 | 0.102 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | |
| AT5G67530 | PUB49 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.861 | 80 | 56 | 64 | 199 | 58.82% | 75.67% | 136 | 263 | 1.17 | 2.64 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | |
| AT5G67530 | PUB49 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.71 x 10-6 | 1.9 | 74 | 0 | 27 | 19 | 100.00% | 41.30% | 74 | 46 | 15.345 | 3.39 x 10-14 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' |
| AT5G67530 | PUB49 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.47 x 10-17 | 5.777 | 206 | 11 | 10 | 44 | 94.93% | 81.48% | 217 | 54 | 1.194 | 3.41 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' |
| AT5G67520 | APK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.185 | 13 | 1 | 8 | 15 | 92.86% | 65.22% | 14 | 23 | 0.222 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.4 | ||
| AT5G67520 | APK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.786 | 4 | 3 | 3 | 13 | 57.14% | 81.25% | 7 | 16 | 0.453 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.4' | ||
| AT5G67520 | APK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 35 | 100.00% | 0 | 35 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.4' | |||
| AT5G67520 | APK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.352 | 28 | 15 | 2 | 14 | 65.12% | 87.50% | 43 | 16 | 0.269 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.4' | ||
| AT5G67520 | APK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.22 x 10-12 | 4.953 | 52 | 43 | 0 | 94 | 54.74% | 100.00% | 95 | 94 | 13.546 | 2.03 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.4' |
| AT5G67520 | APK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0273 | 0.0 | 55 | 18 | 15 | 48 | 75.34% | 76.19% | 73 | 63 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.4' | |
| AT5G67520 | APK4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.916 | 47 | 15 | 30 | 45 | 75.81% | 60.00% | 62 | 75 | 0.14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.4' | ||
| AT5G67520 | APK4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.87 x 10-8 | 4.174 | 13 | 20 | 93 | 49 | 39.39% | 34.51% | 33 | 142 | 0.784 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.4' | |
| AT5G67520 | APK4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 9.28 x 10-12 | 3.369 | 49 | 9 | 17 | 139 | 84.48% | 89.10% | 58 | 156 | 0.391 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.4' | |
| AT5G67510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.35 x 10-3 | 1.067 | 567 | 265 | 239 | 640 | 68.15% | 72.81% | 832 | 879 | 0.0912 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.32 | ||
| AT5G67510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0508 | 697 | 394 | 422 | 1147 | 63.89% | 73.10% | 1091 | 1569 | 1.215 | 2.51 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.32' | ||
| AT5G67510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.28 x 10-22 | 3.344 | 393 | 25 | 107 | 173 | 94.02% | 61.79% | 418 | 280 | 5.116 | 9.22 x 10-26 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.32' | |
| AT5G67510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.88 x 10-3 | 1.039 | 1318 | 560 | 355 | 784 | 70.18% | 68.83% | 1878 | 1139 | 0.683 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.32' | ||
| AT5G67510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 5.68 x 10-7 | 1.353 | 490 | 73 | 169 | 213 | 87.03% | 55.76% | 563 | 382 | 3.407 | 4.42 x 10-26 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.32' | |
| AT5G67510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0477 | 0.0 | 183 | 79 | 53 | 139 | 69.85% | 72.40% | 262 | 192 | 0.705 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.32' | ||
| AT5G67510 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.58 | 74 | 32 | 25 | 59 | 69.81% | 70.24% | 106 | 84 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.32' | |||
| AT5G67510 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 5.81 x 10-8 | 7.454 | 88 | 0 | 0 | 5 | 100.00% | 100.00% | 88 | 5 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.32' | ||
| AT5G67510 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.31 x 10-5 | 1.479 | 44 | 0 | 27 | 24 | 100.00% | 47.06% | 44 | 51 | 7.486 | 1.25 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.32' | |
| AT5G67500 | VDAC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0469 | 0.0 | 796 | 226 | 788 | 1091 | 77.89% | 58.06% | 1022 | 1879 | 2.003 | 3.36 x 10-26 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.06 |
| AT5G67500 | VDAC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0674 | 972 | 403 | 1237 | 1773 | 70.69% | 58.90% | 1375 | 3010 | 1.393 | 4.51 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | |
| AT5G67500 | VDAC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.572 | 850 | 177 | 567 | 505 | 82.77% | 47.11% | 1027 | 1072 | 4.069 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | |
| AT5G67500 | VDAC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.55 x 10-8 | 1.171 | 3977 | 1079 | 1032 | 1518 | 78.66% | 59.53% | 5056 | 2550 | 2.165 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' |
| AT5G67500 | VDAC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0035 | 1.015 | 1388 | 446 | 292 | 490 | 75.68% | 62.66% | 1834 | 782 | 1.442 | 8.33 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' |
| AT5G67500 | VDAC2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.56 x 10-9 | 1.297 | 1303 | 335 | 421 | 714 | 79.55% | 62.91% | 1638 | 1135 | 1.803 | 6.09 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' |
| AT5G67500 | VDAC2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.148 | 785 | 328 | 474 | 923 | 70.53% | 66.07% | 1113 | 1397 | 0.0 | 0.045 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | |
| AT5G67500 | VDAC2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.301 | 197 | 21 | 155 | 87 | 90.37% | 35.95% | 218 | 242 | 8.233 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | |
| AT5G67500 | VDAC2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.83 x 10-8 | 1.961 | 314 | 8 | 169 | 87 | 97.52% | 33.98% | 322 | 256 | 29.606 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' |
| AT5G67490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 2 | 1 | 0 | 0 | 66.67% | 3 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.49 | ||||
| AT5G67490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.49' | ||||
| AT5G67490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | no data | 0.0158 | 0.0 | 317 | 231 | 125 | 257 | 57.85% | 67.28% | 548 | 382 | 1.022 | 5.93 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.49' | |
| AT5G67490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | not imprinted | 0.836 | 5 | 2 | 3 | 2 | 71.43% | 40.00% | 7 | 5 | 0.798 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.49' | |||
| AT5G67490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 40 | 56 | 13 | 73 | 41.67% | 84.88% | 96 | 86 | 2.936 | 3.52 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.49' | ||
| AT5G67490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 52 | 26 | 19 | 37 | 66.67% | 66.07% | 78 | 56 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.49' | |||
| AT5G67490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.636 | 8 | 3 | 3 | 11 | 72.73% | 78.57% | 11 | 14 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.49' | |||
| AT5G67490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.52 x 10-7 | 1.484 | 127 | 142 | 213 | 429 | 47.21% | 66.82% | 269 | 642 | 1.505 | 1.24 x 10-7 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.49' | |
| AT5G67490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.604 | 504 | 91 | 289 | 231 | 84.71% | 44.42% | 595 | 520 | 4.665 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.49' | ||
| AT5G67488 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT5G67488 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67488 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | no data | 1.98 x 10-7 | 3.676 | 31 | 0 | 0 | 7 | 100.00% | 100.00% | 31 | 7 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G67488 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67488 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 6 | 0 | 0 | 0 | 100.00% | 6 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT5G67488 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | no data | 6.67 x 10-11 | 6.861 | 15 | 0 | 0 | 27 | 100.00% | 100.00% | 15 | 27 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT5G67488 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67488 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67488 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67480 | BT4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.77 x 10-10 | 1.551 | 374 | 61 | 433 | 648 | 85.98% | 59.94% | 435 | 1081 | 2.77 | 3.37 x 10-23 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.25 |
| AT5G67480 | BT4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 5.31 x 10-8 | 1.254 | 808 | 254 | 479 | 970 | 76.08% | 66.94% | 1062 | 1449 | 1.223 | 3.46 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT5G67480 | BT4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.594 | 892 | 518 | 238 | 520 | 63.26% | 68.60% | 1410 | 758 | 0.0 | 0.0197 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT5G67480 | BT4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.13 | 905 | 336 | 353 | 629 | 72.93% | 64.05% | 1241 | 982 | 1.171 | 5.21 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT5G67480 | BT4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 3.04 x 10-10 | 2.03 | 412 | 156 | 18 | 109 | 72.54% | 85.83% | 568 | 127 | 1.164 | 2.38 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT5G67480 | BT4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 7.36 x 10-5 | 1.152 | 477 | 398 | 232 | 504 | 54.51% | 68.48% | 875 | 736 | 1.359 | 3.84 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT5G67480 | BT4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.225 | 1486 | 586 | 279 | 506 | 71.72% | 64.46% | 2072 | 785 | 1.098 | 6.76 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' | |
| AT5G67480 | BT4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0122 | 1.007 | 1355 | 501 | 195 | 213 | 73.01% | 52.21% | 1856 | 408 | 1.841 | 7.08 x 10-15 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT5G67480 | BT4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 8.58 x 10-6 | 1.172 | 1783 | 220 | 1422 | 469 | 89.02% | 24.80% | 2003 | 1891 | 19.248 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.25' |
| AT5G67470 | FH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.755 | 22 | 11 | 22 | 56 | 66.67% | 71.79% | 33 | 78 | 0.838 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .9 | ||
| AT5G67470 | FH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.686 | 67 | 39 | 55 | 147 | 63.21% | 72.77% | 106 | 202 | 0.166 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.9' | ||
| AT5G67470 | FH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.195 | 89 | 81 | 26 | 137 | 52.35% | 84.05% | 170 | 163 | 2.343 | 1.59 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.9' | |
| AT5G67470 | FH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 8.95 x 10-4 | 1.081 | 838 | 336 | 270 | 613 | 71.38% | 69.42% | 1174 | 883 | 0.591 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.9' | |
| AT5G67470 | FH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.65 x 10-3 | 1.033 | 295 | 187 | 97 | 381 | 61.20% | 79.71% | 482 | 478 | 1.66 | 1.12 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.9' |
| AT5G67470 | FH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.795 | 331 | 234 | 190 | 565 | 58.58% | 74.83% | 565 | 755 | 1.509 | 1.86 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.9' | |
| AT5G67470 | FH6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 6.95 x 10-3 | 1.011 | 729 | 392 | 195 | 564 | 65.03% | 74.31% | 1121 | 759 | 1.169 | 8.3 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.9' |
| AT5G67470 | FH6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 6.58 x 10-9 | 1.477 | 363 | 258 | 221 | 305 | 58.45% | 57.98% | 621 | 526 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.9' | |
| AT5G67470 | FH6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.39 x 10-15 | 1.627 | 884 | 173 | 285 | 494 | 83.63% | 63.41% | 1057 | 779 | 2.166 | 2.33 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.9' |
| AT5G67460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.551 | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.05 | |||
| AT5G67460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 3 | 12 | 80.00% | 0 | 15 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||||
| AT5G67460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 4 | 6 | 60.00% | 0 | 10 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||||
| AT5G67460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.602 | 24 | 7 | 4 | 9 | 77.42% | 69.23% | 31 | 13 | 0.93 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||
| AT5G67460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 1.67 x 10-13 | 9.741 | 25 | 0 | 0 | 23 | 100.00% | 100.00% | 25 | 23 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||
| AT5G67460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||||
| AT5G67460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.2 | 12 | 6 | 15 | 79 | 66.67% | 84.04% | 18 | 94 | 0.199 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||
| AT5G67460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 11 | 100.00% | 0 | 11 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||||
| AT5G67460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 19 | 100.00% | 0 | 19 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||||
| AT5G67455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT5G67455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67455 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67455 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67455 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT5G67450 | ZF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.924 | 11 | 11 | 2 | 16 | 50.00% | 88.89% | 22 | 18 | 0.0 | 0.0435 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .23 | |
| AT5G67450 | ZF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.666 | 3 | 0 | 9 | 12 | 100.00% | 57.14% | 3 | 21 | 0.394 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | ||
| AT5G67450 | ZF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 10 | 0 | 0.00% | 0 | 10 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |||
| AT5G67450 | ZF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |||
| AT5G67450 | ZF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | ||||
| AT5G67450 | ZF1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | ||||
| AT5G67450 | ZF1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.314 | 3 | 6 | 15 | 32 | 33.33% | 68.09% | 9 | 47 | 0.139 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | ||
| AT5G67450 | ZF1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 21 | 0 | 0 | 0 | 100.00% | 21 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | |||
| AT5G67450 | ZF1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.23' | ||||
| AT5G67440 | NPY3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.935 | 11 | 4 | 10 | 11 | 73.33% | 52.38% | 15 | 21 | 0.483 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .17 | ||
| AT5G67440 | NPY3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.109 | 18 | 3 | 11 | 24 | 85.71% | 68.57% | 21 | 35 | 0.324 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.17' |