| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G06590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.64' | |||||
| AT3G06590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 0.22 | 7 | 0 | 0 | 1 | 100.00% | 100.00% | 7 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.64' | |||
| AT3G06590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0231 | 0.0 | 351 | 88 | 95 | 154 | 79.95% | 61.85% | 439 | 249 | 1.51 | 3.41 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.64' | |
| AT3G06590 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | maternally biased | not imprinted | 6.5 x 10-23 | 2.39 | 345 | 82 | 159 | 548 | 80.80% | 77.51% | 427 | 707 | 0.347 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.64' | ||
| AT3G06590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .64 | |||
| AT3G06580 | GALK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0261 | 0.0 | 101 | 18 | 75 | 109 | 84.87% | 59.24% | 119 | 184 | 1.753 | 1.03 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .05 |
| AT3G06580 | GALK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0545 | 146 | 42 | 61 | 121 | 77.66% | 66.48% | 188 | 182 | 0.067 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | ||
| AT3G06580 | GALK | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 5.1 x 10-4 | 1.112 | 355 | 113 | 200 | 414 | 75.85% | 67.43% | 468 | 614 | 1.038 | 8.67 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' |
| AT3G06580 | GALK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 5.26 x 10-14 | 2.312 | 172 | 52 | 44 | 231 | 76.79% | 84.00% | 224 | 275 | 0.0755 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' | |
| AT3G06580 | GALK | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.69 x 10-8 | 2.807 | 129 | 0 | 135 | 61 | 100.00% | 31.12% | 129 | 196 | 54.989 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' |
| AT3G06580 | GALK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.64 x 10-6 | 1.49 | 116 | 20 | 139 | 280 | 85.29% | 66.83% | 136 | 419 | 1.469 | 8.41 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' |
| AT3G06580 | GALK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 3.41 x 10-3 | 1.021 | 81 | 39 | 24 | 107 | 67.50% | 81.68% | 120 | 131 | 0.0 | 0.0191 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' |
| AT3G06580 | GALK | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 5.1 x 10-14 | 6.687 | 271 | 0 | 74 | 41 | 100.00% | 35.65% | 271 | 115 | 87.135 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' |
| AT3G06580 | GALK | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.1 x 10-29 | 11.13 | 167 | 1 | 67 | 136 | 99.40% | 67.00% | 168 | 203 | 10.805 | 1.92 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.05' |
| AT3G06570 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | PEG | not imprinted | 1.02 x 10-9 | 9.948 | 22 | 24 | 37 | 3 | 47.83% | 7.50% | 46 | 40 | 2.09 | 6.49 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |
| AT3G06570 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |||||
| AT3G06570 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0981 | 56 | 24 | 53 | 159 | 70.00% | 75.00% | 80 | 212 | 0.601 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |||
| AT3G06570 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0149 | 0.0 | 23 | 0 | 44 | 26 | 100.00% | 37.14% | 23 | 70 | 6.269 | 4.42 x 10-8 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |
| AT3G06570 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |||||
| AT3G06570 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.93 | 156 | 109 | 95 | 278 | 58.87% | 74.53% | 265 | 373 | 1.27 | 1.39 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | ||
| AT3G06570 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0902 | 58 | 26 | 57 | 181 | 69.05% | 76.05% | 84 | 238 | 0.413 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.44 | |||
| AT3G06570 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.669 | 166 | 17 | 94 | 45 | 90.71% | 32.37% | 183 | 139 | 8.74 | 1.93 x 10-28 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | ||
| AT3G06570 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |||||
| AT3G06560 | PAPS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 13 | 0 | 0 | 0 | 100.00% | 13 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||
| AT3G06560 | PAPS3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | ||||
| AT3G06560 | PAPS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.704 | 5 | 1 | 0 | 2 | 83.33% | 100.00% | 6 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | ||
| AT3G06560 | PAPS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 11 | 0 | 0 | 0.00% | 11 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||
| AT3G06560 | PAPS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | ||||
| AT3G06560 | PAPS3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | ||||
| AT3G06560 | PAPS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 3 | 1 | 25.00% | 0 | 4 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||
| AT3G06560 | PAPS3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .03 | |||
| AT3G06560 | PAPS3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 2 | 2 | 0 | 1 | 50.00% | 100.00% | 4 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | ||
| AT3G06550 | RWA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | maternally biased | not imprinted | 0.0 | 3.126 | 493 | 126 | 129 | 606 | 79.64% | 82.45% | 619 | 735 | 0.356 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G06550 | RWA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.996 | 61 | 36 | 64 | 166 | 62.89% | 72.17% | 97 | 230 | 0.226 | TAIR10 | |||
| AT3G06550 | RWA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.024 | 0.0 | 486 | 40 | 328 | 163 | 92.40% | 33.20% | 526 | 491 | 14.703 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT3G06550 | RWA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 7.29 x 10-16 | 13.756 | 29 | 0 | 0 | 28 | 100.00% | 100.00% | 29 | 28 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G06550 | RWA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 3.92 x 10-15 | 2.316 | 189 | 34 | 116 | 343 | 84.75% | 74.73% | 223 | 459 | 1.06 | 8.78 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT3G06550 | RWA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 1.69 x 10-17 | 8.771 | 38 | 0 | 21 | 118 | 100.00% | 84.89% | 38 | 139 | 1.111 | 0.0128 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT3G06550 | RWA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.88 x 10-4 | 1.248 | 154 | 56 | 20 | 80 | 73.33% | 80.00% | 210 | 100 | 0.481 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G06550 | RWA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.18 x 10-17 | 3.43 | 201 | 23 | 30 | 108 | 89.73% | 78.26% | 224 | 138 | 1.059 | 5.68 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT3G06550 | RWA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 8.36 x 10-4 | 1.104 | 328 | 124 | 49 | 139 | 72.57% | 73.94% | 452 | 188 | 0.85 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G06545 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G06545 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G06545 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 3 | 0 | 0.00% | 0 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT3G06545 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G06545 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT3G06545 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | 1.0 | TAIR10 | |||||
| AT3G06545 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 3 | 0 | 0.00% | 0 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT3G06545 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G06545 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G06540 | REP | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.001 | 1.094 | 595 | 67 | 221 | 171 | 89.88% | 43.62% | 662 | 392 | 7.31 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' |
| AT3G06540 | REP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.222 | 159 | 47 | 78 | 125 | 77.18% | 61.58% | 206 | 203 | 1.152 | 1.58 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | |
| AT3G06540 | REP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.297 | 292 | 128 | 90 | 201 | 69.52% | 69.07% | 420 | 291 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | ||
| AT3G06540 | REP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0006 | 1.101 | 192 | 82 | 73 | 231 | 70.07% | 75.99% | 274 | 304 | 0.146 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | |
| AT3G06540 | REP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.83 x 10-4 | 1.11 | 350 | 62 | 240 | 293 | 84.95% | 54.97% | 412 | 533 | 2.979 | 9.42 x 10-23 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' |
| AT3G06540 | REP | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 0.0 | 3.914 | 216 | 27 | 176 | 606 | 88.89% | 77.49% | 243 | 782 | 1.32 | 1.3 x 10-4 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' |
| AT3G06540 | REP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0891 | 114 | 38 | 172 | 341 | 75.00% | 66.47% | 152 | 513 | 0.0961 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | ||
| AT3G06540 | REP | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 4.26 x 10-6 | 1.196 | 620 | 191 | 406 | 793 | 76.45% | 66.14% | 811 | 1199 | 1.254 | 3.07 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' |
| AT3G06540 | REP | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.128 | 79 | 46 | 96 | 141 | 63.20% | 59.49% | 125 | 237 | 0.691 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.37 | ||
| AT3G06530 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 8.63 x 10-3 | 1.083 | 135 | 89 | 75 | 104 | 60.27% | 58.10% | 224 | 179 | 0.868 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.38 | ||
| AT3G06530 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.567 | 1131 | 471 | 751 | 1331 | 70.60% | 63.93% | 1602 | 2082 | 1.113 | 8.06 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | ||
| AT3G06530 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.35 x 10-10 | 1.942 | 404 | 32 | 122 | 137 | 92.66% | 52.90% | 436 | 259 | 6.161 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |
| AT3G06530 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.48 x 10-3 | 1.048 | 289 | 113 | 223 | 531 | 71.89% | 70.42% | 402 | 754 | 0.771 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | ||
| AT3G06530 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 1.48 x 10-14 | 4.201 | 49 | 13 | 9 | 142 | 79.03% | 94.04% | 62 | 151 | 1.183 | 0.0036 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |
| AT3G06530 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.59 | 41 | 33 | 5 | 23 | 55.41% | 82.14% | 74 | 28 | 0.0 | 0.0321 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | ||
| AT3G06530 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.216 | 134 | 43 | 49 | 95 | 75.71% | 65.97% | 177 | 144 | 0.168 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |||
| AT3G06530 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.16 x 10-6 | 1.384 | 321 | 58 | 112 | 187 | 84.70% | 62.54% | 379 | 299 | 1.986 | 1.56 x 10-10 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |
| AT3G06530 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.458 | 98 | 61 | 124 | 260 | 61.64% | 67.71% | 159 | 384 | 0.24 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.38' | |||
| AT3G06520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.65 x 10-5 | 1.685 | 61 | 22 | 1 | 23 | 73.49% | 95.83% | 83 | 24 | 0.0 | 0.0306 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | |
| AT3G06520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 21 | 0 | 0.00% | 0 | 21 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | ||||
| AT3G06520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0812 | 32 | 15 | 15 | 65 | 68.09% | 81.25% | 47 | 80 | 0.22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | |||
| AT3G06520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 11 | 0 | 0 | 0 | 100.00% | 11 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | ||||
| AT3G06520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 6 | 32 | 84.21% | 0 | 38 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | ||||
| AT3G06520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 3 | 2 | 0 | 0 | 60.00% | 5 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | ||||
| AT3G06520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 28 | 38 | 19 | 100 | 42.42% | 84.03% | 66 | 119 | 2.71 | 4.5 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | ||
| AT3G06520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0811 | 6 | 15 | 12 | 32 | 28.57% | 72.73% | 21 | 44 | 1.392 | 4.04 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.17 | ||
| AT3G06520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.71 x 10-8 | 3.059 | 41 | 0 | 31 | 55 | 100.00% | 63.95% | 41 | 86 | 3.887 | 1.43 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | |
| AT3G06510 | SFR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.86 x 10-17 | 1.648 | 1386 | 92 | 1320 | 779 | 93.78% | 37.11% | 1478 | 2099 | 18.928 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' |
| AT3G06510 | SFR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.89 | 260 | 140 | 48 | 113 | 65.00% | 70.19% | 400 | 161 | 0.505 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | ||
| AT3G06510 | SFR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.522 | 404 | 184 | 737 | 1461 | 68.71% | 66.47% | 588 | 2198 | 0.459 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | ||
| AT3G06510 | SFR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.35 x 10-10 | 1.315 | 767 | 256 | 544 | 1217 | 74.98% | 69.11% | 1023 | 1761 | 1.051 | 1.53 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' |
| AT3G06510 | SFR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.04 x 10-4 | 1.429 | 34 | 0 | 22 | 25 | 100.00% | 53.19% | 34 | 47 | 4.425 | 1.2 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' |
| AT3G06510 | SFR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.39 x 10-24 | 1.922 | 698 | 158 | 422 | 978 | 81.54% | 69.86% | 856 | 1400 | 1.431 | 1.49 x 10-9 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' |
| AT3G06510 | SFR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.447 | 1 | 14 | 0 | 25 | 6.67% | 100.00% | 15 | 25 | 15.319 | 1.85 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |
| AT3G06510 | SFR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0208 | 1.001 | 418 | 232 | 477 | 805 | 64.31% | 62.79% | 650 | 1282 | 0.739 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.53 | |
| AT3G06510 | SFR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.156 | 1419 | 585 | 1151 | 2107 | 70.81% | 64.67% | 2004 | 3258 | 1.12 | 1.97 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |
| AT3G06500 | A/N-InvC | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 3.14 x 10-3 | 1.07 | 117 | 32 | 60 | 140 | 78.52% | 70.00% | 149 | 200 | 0.172 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.61' | |
| AT3G06500 | A/N-InvC | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0588 | 38 | 27 | 63 | 87 | 58.46% | 58.00% | 65 | 150 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .61 | ||
| AT3G06500 | A/N-InvC | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0176 | 0.0 | 73 | 23 | 37 | 95 | 76.04% | 71.97% | 96 | 132 | 0.589 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.61' | |
| AT3G06500 | A/N-InvC | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 14 | 34 | 0 | 0 | 29.17% | 48 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.61' | |||
| AT3G06500 | A/N-InvC | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 5.28 x 10-18 | 2.951 | 233 | 24 | 66 | 162 | 90.66% | 71.05% | 257 | 228 | 1.959 | 6.11 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.61' |
| AT3G06500 | A/N-InvC | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.176 | 64 | 20 | 11 | 29 | 76.19% | 72.50% | 84 | 40 | 0.894 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.61' | ||
| AT3G06500 | A/N-InvC | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 77 | 38 | 107 | 203 | 66.96% | 65.48% | 115 | 310 | 0.941 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.61' | ||
| AT3G06500 | A/N-InvC | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 6.21 x 10-3 | 1.089 | 91 | 52 | 37 | 35 | 63.64% | 48.61% | 143 | 72 | 0.057 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.61' | |
| AT3G06500 | A/N-InvC | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.287 | 46 | 49 | 15 | 39 | 48.42% | 72.22% | 95 | 54 | 1.032 | 9.82 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.61' | |
| AT3G06490 | MYB108 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.16' | ||||
| AT3G06490 | MYB108 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.16' | ||||
| AT3G06490 | MYB108 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.16' | ||||
| AT3G06490 | MYB108 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.16' | ||||
| AT3G06490 | MYB108 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.16' |