| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G08950 | HCC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.152 | 48 | 6 | 15 | 0 | 88.89% | 0.00% | 54 | 15 | 13.688 | 3.72 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | |
| AT3G08950 | HCC1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.322 | 222 | 46 | 62 | 68 | 82.84% | 52.31% | 268 | 130 | 2.277 | 6.79 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | |
| AT3G08950 | HCC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.15 x 10-3 | 0.0 | 85 | 25 | 49 | 122 | 77.27% | 71.35% | 110 | 171 | 0.392 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | |
| AT3G08950 | HCC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.136 | 9 | 9 | 43 | 60 | 50.00% | 58.25% | 18 | 103 | 0.746 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | ||
| AT3G08950 | HCC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.525 | 67 | 22 | 23 | 21 | 75.28% | 47.73% | 89 | 44 | 1.155 | 5.04 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | |
| AT3G08950 | HCC1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.424 | 159 | 66 | 93 | 190 | 70.67% | 67.14% | 225 | 283 | 0.62 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.02' | ||
| AT3G08947 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.953 | 188 | 99 | 187 | 375 | 65.51% | 66.73% | 287 | 562 | 0.922 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT3G08947 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G08947 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.21 x 10-17 | 7.482 | 60 | 0 | 37 | 103 | 100.00% | 73.57% | 60 | 140 | 3.862 | 1.08 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G08947 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 65 | 34 | 132 | 293 | 65.66% | 68.94% | 99 | 425 | 0.69 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT3G08947 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 0.834 | 54 | 38 | 9 | 33 | 58.70% | 78.57% | 92 | 42 | 0.0972 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT3G08947 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 61 | 28 | 50 | 90 | 68.54% | 64.29% | 89 | 140 | 0.758 | TAIR10 | ||||
| AT3G08947 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 7.39 x 10-21 | 9.085 | 75 | 0 | 71 | 174 | 100.00% | 71.02% | 75 | 245 | 6.05 | 1.56 x 10-9 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G08947 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.45 x 10-8 | 3.119 | 32 | 0 | 61 | 124 | 100.00% | 67.03% | 32 | 185 | 3.02 | 2.78 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G08947 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G08943 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | paternally biased | not imprinted | 3.21 x 10-26 | 3.123 | 390 | 164 | 398 | 148 | 70.40% | 27.11% | 554 | 546 | 4.415 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G08943 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.44 x 10-11 | 2.723 | 117 | 8 | 41 | 89 | 93.60% | 68.46% | 125 | 130 | 2.312 | 2.98 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G08943 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.657 | 503 | 180 | 396 | 607 | 73.65% | 60.52% | 683 | 1003 | 1.355 | 1.34 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G08943 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.56 x 10-5 | 1.193 | 381 | 44 | 316 | 279 | 89.65% | 46.89% | 425 | 595 | 6.12 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G08943 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.161 | 159 | 114 | 207 | 456 | 58.24% | 68.78% | 273 | 663 | 1.054 | 7.42 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G08943 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.37 x 10-5 | 1.138 | 1186 | 230 | 555 | 632 | 83.76% | 53.24% | 1416 | 1187 | 3.509 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G08943 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 0 | 18 | 0 | 28 | 0.00% | 100.00% | 18 | 28 | 34.154 | 1.4 x 10-12 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G08943 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.207 | 923 | 353 | 274 | 349 | 72.34% | 56.02% | 1276 | 623 | 1.551 | 3.58 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G08943 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0234 | 0.0 | 315 | 206 | 232 | 435 | 60.46% | 65.22% | 521 | 667 | 0.206 | TAIR10 | |||
| AT3G08940 | LHCB4.2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 1.352 | 8505 | 2949 | 8298 | 7916 | 74.25% | 48.82% | 11454 | 16214 | 2.811 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.12 |
| AT3G08940 | LHCB4.2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' | ||||
| AT3G08940 | LHCB4.2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0663 | 12662 | 4617 | 2007 | 2696 | 73.28% | 57.33% | 17279 | 4703 | 1.863 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' | |
| AT3G08940 | LHCB4.2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0255 | 0.0 | 15 | 0 | 33 | 29 | 100.00% | 46.77% | 15 | 62 | 2.712 | 1.03 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' |
| AT3G08940 | LHCB4.2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 7.29 x 10-4 | 1.026 | 4279 | 912 | 2747 | 2722 | 82.43% | 49.77% | 5191 | 5469 | 4.181 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' |
| AT3G08940 | LHCB4.2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.24 x 10-10 | 1.199 | 4566 | 650 | 1926 | 1527 | 87.54% | 44.22% | 5216 | 3453 | 7.631 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' |
| AT3G08940 | LHCB4.2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.887 | 8 | 3 | 4 | 10 | 72.73% | 71.43% | 11 | 14 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' | ||
| AT3G08940 | LHCB4.2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.71 x 10-16 | 1.205 | 4672 | 1445 | 5926 | 5527 | 76.38% | 48.26% | 6117 | 11453 | 3.15 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' |
| AT3G08940 | LHCB4.2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0163 | 0.0 | 2559 | 420 | 2244 | 1697 | 85.90% | 43.06% | 2979 | 3941 | 6.823 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.12' |
| AT3G08930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.491 | 822 | 205 | 941 | 877 | 80.04% | 48.24% | 1027 | 1818 | 3.368 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.18' | ||
| AT3G08930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.44 x 10-6 | 1.155 | 827 | 255 | 1359 | 2380 | 76.43% | 63.65% | 1082 | 3739 | 1.506 | 1.37 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.18' | |
| AT3G08930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0406 | 0.0 | 1304 | 640 | 457 | 1046 | 67.08% | 69.59% | 1944 | 1503 | 0.158 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.18' | ||
| AT3G08930 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0055 | 1.028 | 418 | 145 | 324 | 638 | 74.25% | 66.32% | 563 | 962 | 1.061 | 4.11 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.18' | |
| AT3G08930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.78 x 10-3 | 1.052 | 2587 | 772 | 555 | 841 | 77.02% | 60.24% | 3359 | 1396 | 1.833 | 3.7 x 10-29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.18' | |
| AT3G08930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 543 | 225 | 660 | 1119 | 70.70% | 62.90% | 768 | 1779 | 1.107 | 5.92 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .18 | ||
| AT3G08930 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 7.67 x 10-4 | 1.077 | 252 | 16 | 201 | 114 | 94.03% | 36.19% | 268 | 315 | 13.391 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.18' | |
| AT3G08930 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 9.19 x 10-5 | 1.084 | 2135 | 329 | 1038 | 853 | 86.65% | 45.11% | 2464 | 1891 | 6.423 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.18' | |
| AT3G08930 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.339 | 666 | 24 | 310 | 30 | 96.52% | 8.82% | 690 | 340 | 131.836 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.18' | ||
| AT3G08920 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.99 x 10-18 | 7.849 | 126 | 0 | 59 | 79 | 100.00% | 57.25% | 126 | 138 | 17.511 | 3.04 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | |
| AT3G08920 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.919 | 140 | 7 | 76 | 17 | 95.24% | 18.28% | 147 | 93 | 25.313 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | ||
| AT3G08920 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.714 | 19 | 8 | 27 | 63 | 70.37% | 70.00% | 27 | 90 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | |||
| AT3G08920 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.488 | 196 | 42 | 41 | 44 | 82.35% | 51.76% | 238 | 85 | 2.046 | 2.54 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | ||
| AT3G08920 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0402 | 0.0 | 99 | 0 | 91 | 12 | 100.00% | 11.65% | 99 | 103 | 107.987 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | |
| AT3G08920 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.96 x 10-3 | 1.045 | 90 | 2 | 80 | 40 | 97.83% | 33.33% | 92 | 120 | 16.713 | 9.45 x 10-24 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | |
| AT3G08920 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 4.07 x 10-7 | 2.795 | 49 | 0 | 8 | 16 | 100.00% | 66.67% | 49 | 24 | 2.795 | 1.08 x 10-4 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | |
| AT3G08920 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 250 | 29 | 40 | 18 | 89.61% | 31.03% | 279 | 58 | 7.547 | 2.35 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.71' | ||
| AT3G08920 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.918 | 126 | 10 | 96 | 26 | 92.65% | 21.31% | 136 | 122 | 16.065 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.71 | ||
| AT3G08910 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.246 | 67 | 40 | 99 | 160 | 62.62% | 61.78% | 107 | 259 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .04 | |||
| AT3G08910 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 6.2 x 10-4 | 0.0 | 4 | 0 | 0 | 14 | 100.00% | 100.00% | 4 | 14 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | ||
| AT3G08910 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.756 | 369 | 143 | 126 | 216 | 72.07% | 63.16% | 512 | 342 | 0.0 | 0.0265 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | ||
| AT3G08910 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.79 x 10-9 | 1.532 | 323 | 59 | 195 | 343 | 84.55% | 63.75% | 382 | 538 | 1.98 | 5.95 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |
| AT3G08910 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 19 | 0 | 1 | 0 | 100.00% | 0.00% | 19 | 1 | 0.059 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |||
| AT3G08910 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.38 x 10-6 | 1.327 | 218 | 50 | 205 | 401 | 81.34% | 66.17% | 268 | 606 | 1.387 | 1.91 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |
| AT3G08910 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0457 | 0.0 | 336 | 157 | 201 | 485 | 68.15% | 70.70% | 493 | 686 | 0.433 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | ||
| AT3G08910 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.793 | 35 | 3 | 33 | 18 | 92.11% | 35.29% | 38 | 51 | 3.961 | 1.41 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | ||
| AT3G08910 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.17 | 443 | 123 | 184 | 249 | 78.27% | 57.51% | 566 | 433 | 1.803 | 7.47 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | ||
| AT3G08900 | RGP3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0187 | 0.0 | 9204 | 3773 | 3105 | 4735 | 70.93% | 60.40% | 12977 | 7840 | 1.472 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.57' |
| AT3G08900 | RGP3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.57' | ||||
| AT3G08900 | RGP3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.58 x 10-4 | 1.02 | 18164 | 6759 | 18617 | 25924 | 72.88% | 58.20% | 24923 | 44541 | 1.842 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.57' |
| AT3G08900 | RGP3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.395 | 5329 | 1925 | 2693 | 4023 | 73.46% | 59.90% | 7254 | 6716 | 1.675 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.57' | |
| AT3G08900 | RGP3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.747 | 40495 | 13720 | 10055 | 13472 | 74.69% | 57.26% | 54215 | 23527 | 2.106 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.57' | |
| AT3G08900 | RGP3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.26 x 10-10 | 1.079 | 13664 | 4591 | 11922 | 14013 | 74.85% | 54.03% | 18255 | 25935 | 2.39 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -4.57 |
| AT3G08900 | RGP3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.57' | ||||
| AT3G08900 | RGP3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.57' | ||||
| AT3G08900 | RGP3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.83 x 10-3 | 1.015 | 8471 | 3103 | 2088 | 3416 | 73.19% | 62.06% | 11574 | 5504 | 1.517 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.57' |
| AT3G08890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 3.75 x 10-11 | 2.762 | 68 | 10 | 32 | 146 | 87.18% | 82.02% | 78 | 178 | 0.447 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.65' | ||
| AT3G08890 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 7 | 0 | 0 | 0 | 100.00% | 7 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.65' | ||||
| AT3G08890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 8.74 x 10-22 | 3.198 | 228 | 50 | 40 | 213 | 82.01% | 84.19% | 278 | 253 | 0.64 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.65' | ||
| AT3G08890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.197 | 66 | 36 | 213 | 654 | 64.71% | 75.43% | 102 | 867 | 0.051 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.65' | |||
| AT3G08890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 0.0 | 4.599 | 229 | 37 | 45 | 259 | 86.09% | 85.20% | 266 | 304 | 0.921 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.65' | ||
| AT3G08890 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.292 | 69 | 20 | 65 | 113 | 77.53% | 63.48% | 89 | 178 | 0.0614 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.65' | |||
| AT3G08890 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 3.06 x 10-6 | 2.135 | 14 | 0 | 0 | 9 | 100.00% | 100.00% | 14 | 9 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.65' | ||
| AT3G08890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0102 | 1.015 | 414 | 233 | 78 | 269 | 63.99% | 77.52% | 647 | 347 | 1.286 | 7.66 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.65' | |
| AT3G08890 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.803 | 132 | 87 | 197 | 572 | 60.27% | 74.38% | 219 | 769 | 1.243 | 0.0003 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .65 | ||
| AT3G08880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.049 | 0.0 | 41 | 15 | 48 | 153 | 73.21% | 76.12% | 56 | 201 | 0.907 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.06 | ||
| AT3G08880 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.06' | |||||
| AT3G08880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 9.27 x 10-3 | 1.038 | 196 | 68 | 45 | 120 | 74.24% | 72.73% | 264 | 165 | 0.955 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.06' | ||
| AT3G08880 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.06' | |||||
| AT3G08880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.93 x 10-7 | 7.661 | 109 | 37 | 47 | 1 | 74.66% | 2.08% | 146 | 48 | 16.622 | 8.04 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.06' | |
| AT3G08880 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.06' | |||||
| AT3G08880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.77 x 10-10 | 1.672 | 235 | 55 | 112 | 292 | 81.03% | 72.28% | 290 | 404 | 0.0 | 0.0135 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.06' | |
| AT3G08880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.34 x 10-16 | 7.805 | 39 | 0 | 20 | 99 | 100.00% | 83.19% | 39 | 119 | 1.274 | 6.01 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.06' | |
| AT3G08880 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.148 | 68 | 25 | 100 | 221 | 73.12% | 68.85% | 93 | 321 | 0.664 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.06' | |||
| AT3G08870 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 5.59 x 10-3 | 0.0 | 8 | 0 | 2 | 12 | 100.00% | 85.71% | 8 | 14 | 0.658 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | ||
| AT3G08870 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | |||||
| AT3G08870 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 1.03 x 10-3 | 1.181 | 11 | 0 | 1 | 10 | 100.00% | 90.91% | 11 | 11 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | ||
| AT3G08870 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 26 | 100.00% | 0 | 26 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | ||||
| AT3G08870 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 3.42 x 10-4 | 1.321 | 6 | 0 | 0 | 13 | 100.00% | 100.00% | 6 | 13 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | ||
| AT3G08870 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.17 | ||||
| AT3G08870 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | |||||
| AT3G08870 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 11 | 0 | 0 | 0 | 100.00% | 11 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | ||||
| AT3G08870 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.17' | |||||
| AT3G08860 | PYD4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 117 | 0 | 33 | 0 | 100.00% | 0.00% | 117 | 33 | 261.642 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.86' | |
| AT3G08860 | PYD4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0 | 218.238 | 57 | 0 | 0 | 226 | 100.00% | 100.00% | 57 | 226 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.86' | |
| AT3G08860 | PYD4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.13 x 10-15 | 18.72 | 13 | 0 | 0 | 85 | 100.00% | 100.00% | 13 | 85 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.86' | |
| AT3G08860 | PYD4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.07 x 10-12 | 40.354 | 397 | 0 | 0 | 6 | 100.00% | 100.00% | 397 | 6 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '3.86' |