| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G12380 | ARP5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 1.69 x 10-8 | 13.534 | 0 | 35 | 16 | 23 | 0.00% | 58.97% | 35 | 39 | 6.992 | 7.66 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' |
| AT3G12380 | ARP5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.146 | 109 | 50 | 24 | 76 | 68.55% | 76.00% | 159 | 100 | 0.413 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' | ||
| AT3G12380 | ARP5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 24 | 6 | 35 | 33 | 80.00% | 48.53% | 30 | 68 | 1.113 | 0.0126 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.39 | |
| AT3G12380 | ARP5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.63 x 10-5 | 1.593 | 94 | 29 | 6 | 41 | 76.42% | 87.23% | 123 | 47 | 0.184 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' | |
| AT3G12380 | ARP5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.947 | 27 | 28 | 15 | 67 | 49.09% | 81.71% | 55 | 82 | 1.58 | 1.6 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.39' | |
| AT3G12370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | paternally biased | not imprinted | 1.42 x 10-4 | 2.299 | 6 | 30 | 16 | 33 | 16.67% | 67.35% | 36 | 49 | 2.445 | 7.99 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | |
| AT3G12370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | |||||
| AT3G12370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.51 x 10-3 | 0.0 | 33 | 0 | 21 | 14 | 100.00% | 40.00% | 33 | 35 | 6.634 | 3.53 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | |
| AT3G12370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | |||||
| AT3G12370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.11 x 10-12 | 1.957 | 288 | 62 | 83 | 236 | 82.29% | 73.98% | 350 | 319 | 0.0 | 0.0274 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | |
| AT3G12370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 92 | 51 | 61 | 129 | 64.34% | 67.89% | 143 | 190 | 0.748 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.79 | |||
| AT3G12370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.42 | 87 | 14 | 105 | 50 | 86.14% | 32.26% | 101 | 155 | 5.346 | 1.6 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | ||
| AT3G12370 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.806 | 239 | 118 | 64 | 142 | 66.95% | 68.93% | 357 | 206 | 0.876 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | |||
| AT3G12370 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.79' | |||||
| AT3G12360 | ITN1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.54 x 10-6 | 1.973 | 85 | 0 | 79 | 41 | 100.00% | 34.17% | 85 | 120 | 29.301 | 4.93 x 10-26 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' |
| AT3G12360 | ITN1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.948 | 38 | 23 | 35 | 74 | 62.30% | 67.89% | 61 | 109 | 0.693 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .5 | ||
| AT3G12360 | ITN1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.18 x 10-4 | 1.278 | 231 | 71 | 29 | 90 | 76.49% | 75.63% | 302 | 119 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | |
| AT3G12360 | ITN1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 1.39 x 10-14 | 14.718 | 13 | 0 | 2 | 128 | 100.00% | 98.46% | 13 | 130 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | |
| AT3G12360 | ITN1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0975 | 32 | 87 | 0 | 20 | 26.89% | 100.00% | 119 | 20 | 9.465 | 5.13 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | |
| AT3G12360 | ITN1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 3.78 x 10-10 | 3.851 | 46 | 0 | 24 | 50 | 100.00% | 67.57% | 46 | 74 | 3.549 | 5.09 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' |
| AT3G12360 | ITN1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.33 x 10-6 | 1.466 | 122 | 40 | 69 | 247 | 75.31% | 78.16% | 162 | 316 | 0.589 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | |
| AT3G12360 | ITN1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 2.78 x 10-10 | 3.908 | 45 | 0 | 85 | 148 | 100.00% | 63.52% | 45 | 233 | 5.157 | 1.21 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' |
| AT3G12360 | ITN1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 4.23 x 10-6 | 1.33 | 255 | 69 | 136 | 312 | 78.70% | 69.64% | 324 | 448 | 1.011 | 0.0144 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' |
| AT3G12350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0108 | 0.0 | 188 | 72 | 96 | 244 | 72.31% | 71.76% | 260 | 340 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.03' | ||
| AT3G12350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0246 | 0.0 | 155 | 71 | 154 | 426 | 68.58% | 73.45% | 226 | 580 | 0.301 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.03' | ||
| AT3G12350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0625 | 39 | 14 | 17 | 52 | 73.58% | 75.36% | 53 | 69 | 0.946 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.03' | |||
| AT3G12350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0175 | 1.019 | 41 | 26 | 50 | 52 | 61.19% | 50.98% | 67 | 102 | 0.235 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.03' | ||
| AT3G12350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.278 | 201 | 70 | 62 | 119 | 74.17% | 65.75% | 271 | 181 | 0.158 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.03' | |||
| AT3G12350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.564 | 118 | 42 | 197 | 237 | 73.75% | 54.61% | 160 | 434 | 1.362 | 1.01 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.03 | ||
| AT3G12350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 1.92 x 10-22 | 27.394 | 33 | 0 | 0 | 49 | 100.00% | 100.00% | 33 | 49 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.03' | ||
| AT3G12350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 2.77 x 10-13 | 6.228 | 86 | 0 | 20 | 38 | 100.00% | 65.52% | 86 | 58 | 6.901 | 3.65 x 10-9 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.03' | |
| AT3G12350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 7.77 x 10-4 | 2.64 | 2 | 15 | 44 | 89 | 11.76% | 66.92% | 17 | 133 | 2.701 | 3.08 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.03' | |
| AT3G12345 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G12345 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G12345 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G12345 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G12345 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G12345 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT3G12345 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G12345 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G12345 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G12340 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.92' | |||||
| AT3G12340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 15 | 4 | 9 | 9 | 78.95% | 50.00% | 19 | 18 | 0.188 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.92 | |||
| AT3G12340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 6 | 4 | 5 | 17 | 60.00% | 77.27% | 10 | 22 | 0.649 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.92' | |||
| AT3G12340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.92' | |||||
| AT3G12340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 23 | 0 | 12 | 0 | 100.00% | 0.00% | 23 | 12 | 18.703 | 4.21 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.92' | ||
| AT3G12340 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.871 | 22 | 12 | 9 | 15 | 64.71% | 62.50% | 34 | 24 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.92' | |||
| AT3G12340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.92' | |||||
| AT3G12340 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.984 | 91 | 35 | 55 | 92 | 72.22% | 62.59% | 126 | 147 | 0.188 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.92' | |||
| AT3G12340 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 5 | 5 | 3 | 17 | 50.00% | 85.00% | 10 | 20 | 0.145 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.92' | |||
| AT3G12320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.45 x 10-3 | 1.361 | 32 | 38 | 123 | 216 | 45.71% | 63.72% | 70 | 339 | 1.049 | 0.0182 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.38' | |
| AT3G12320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0448 | 0.0 | 199 | 97 | 198 | 540 | 67.23% | 73.17% | 296 | 738 | 0.123 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.38' | ||
| AT3G12320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.246 | 159 | 163 | 38 | 201 | 49.38% | 84.10% | 322 | 239 | 3.088 | 2.01 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.38' | ||
| AT3G12320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.39 x 10-6 | 1.477 | 403 | 31 | 132 | 111 | 92.86% | 45.68% | 434 | 243 | 8.358 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.38' | |
| AT3G12320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.74 | 64 | 39 | 8 | 12 | 62.14% | 60.00% | 103 | 20 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.38' | |||
| AT3G12320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.987 | 45 | 27 | 116 | 251 | 62.50% | 68.39% | 72 | 367 | 0.52 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.38 | |||
| AT3G12320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.98 x 10-13 | 2.611 | 198 | 20 | 43 | 102 | 90.83% | 70.34% | 218 | 145 | 1.856 | 1.82 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.38' | |
| AT3G12320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.368 | 61 | 21 | 62 | 62 | 74.39% | 50.00% | 82 | 124 | 1.253 | 8.92 x 10-4 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.38' | ||
| AT3G12320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 3.38 x 10-14 | 4.619 | 62 | 1 | 103 | 222 | 98.41% | 68.31% | 63 | 325 | 3.977 | 4.59 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.38' | |
| AT3G12300 | BUG22 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||||
| AT3G12300 | BUG22 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 1.29 x 10-11 | 8.538 | 42 | 0 | 0 | 12 | 100.00% | 100.00% | 42 | 12 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |
| AT3G12300 | BUG22 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 8.13 x 10-3 | 0.0 | 93 | 0 | 29 | 7 | 100.00% | 19.44% | 93 | 36 | 44.905 | 8.15 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' |
| AT3G12300 | BUG22 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.676 | 69 | 32 | 70 | 160 | 68.32% | 69.57% | 101 | 230 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT3G12300 | BUG22 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.74 | 9 | 8 | 36 | 91 | 52.94% | 71.65% | 17 | 127 | 0.262 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT3G12300 | BUG22 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.809 | 49 | 29 | 68 | 132 | 62.82% | 66.00% | 78 | 200 | 0.86 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .24 | ||
| AT3G12300 | BUG22 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||||
| AT3G12300 | BUG22 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||||
| AT3G12300 | BUG22 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.05 | 0.0 | 7 | 0 | 16 | 30 | 100.00% | 65.22% | 7 | 46 | 0.102 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |
| AT3G12290 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0132 | 0.0 | 29 | 0 | 84 | 39 | 100.00% | 31.71% | 29 | 123 | 11.147 | 2.12 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.71' | |
| AT3G12290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.467 | 387 | 145 | 380 | 646 | 72.74% | 62.96% | 532 | 1026 | 1.143 | 5.1 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.71 | ||
| AT3G12290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.57 x 10-3 | 1.084 | 481 | 148 | 87 | 180 | 76.47% | 67.42% | 629 | 267 | 1.012 | 0.024 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.71' | |
| AT3G12290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.447 | 193 | 83 | 53 | 111 | 69.93% | 67.68% | 276 | 164 | 0.772 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.71' | |||
| AT3G12290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.143 | 194 | 81 | 154 | 330 | 70.55% | 68.18% | 275 | 484 | 0.588 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.71' | |||
| AT3G12290 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.51 x 10-3 | 1.228 | 20 | 22 | 49 | 67 | 47.62% | 57.76% | 42 | 116 | 0.348 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.71' | ||
| AT3G12290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.255 | 148 | 83 | 43 | 129 | 64.07% | 75.00% | 231 | 172 | 0.0 | 0.0347 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.71' | ||
| AT3G12290 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.46 x 10-5 | 1.176 | 361 | 112 | 366 | 748 | 76.32% | 67.15% | 473 | 1114 | 1.126 | 9.36 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.71' | |
| AT3G12290 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 7.39 x 10-5 | 1.212 | 241 | 80 | 111 | 286 | 75.08% | 72.04% | 321 | 397 | 0.573 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.71' | ||
| AT3G12280 | RBR1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.844 | 224 | 155 | 180 | 464 | 59.10% | 72.05% | 379 | 644 | 1.224 | 1.02 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.7' | |
| AT3G12280 | RBR1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 6.36 x 10-4 | 1.192 | 75 | 12 | 57 | 109 | 86.21% | 65.66% | 87 | 166 | 1.303 | 1.89 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.7' |
| AT3G12280 | RBR1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | PEG | not imprinted | 2.32 x 10-7 | 3.183 | 24 | 32 | 36 | 21 | 42.86% | 36.84% | 56 | 57 | 0.663 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.7' | |
| AT3G12280 | RBR1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 68 | 17 | 8 | 7 | 80.00% | 46.67% | 85 | 15 | 1.019 | 0.0128 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.7' | |
| AT3G12280 | RBR1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 53 | 12 | 16 | 15 | 81.54% | 48.39% | 65 | 31 | 1.275 | 7.02 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.7' | |
| AT3G12280 | RBR1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.918 | 35 | 14 | 26 | 50 | 71.43% | 65.79% | 49 | 76 | 0.75 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.7 | ||
| AT3G12280 | RBR1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 18 | 0 | 12 | 0 | 100.00% | 0.00% | 18 | 12 | 14.637 | 3.7 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.7' | |
| AT3G12280 | RBR1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.26 x 10-3 | 1.357 | 20 | 51 | 13 | 31 | 28.17% | 70.45% | 71 | 44 | 1.929 | 3.26 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.7' |
| AT3G12280 | RBR1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 35 | 26 | 10 | 30 | 57.38% | 75.00% | 61 | 40 | 0.116 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.7' | ||
| AT3G12270 | PRMT3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 1.74 x 10-12 | 19.43 | 0 | 59 | 29 | 59 | 0.00% | 67.05% | 59 | 88 | 20.106 | 1.19 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' |
| AT3G12270 | PRMT3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 5.59 x 10-7 | 2.393 | 21 | 0 | 13 | 42 | 100.00% | 76.36% | 21 | 55 | 0.0 | 0.0222 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' |
| AT3G12270 | PRMT3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||||
| AT3G12270 | PRMT3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.623 | 44 | 12 | 32 | 46 | 78.57% | 58.97% | 56 | 78 | 0.0548 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||
| AT3G12270 | PRMT3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 126 | 46 | 90 | 134 | 73.26% | 59.82% | 172 | 224 | 1.007 | 0.0158 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | |
| AT3G12270 | PRMT3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.846 | 33 | 19 | 10 | 16 | 63.46% | 61.54% | 52 | 26 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.33 | ||
| AT3G12270 | PRMT3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | ||||
| AT3G12270 | PRMT3 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' | |||
| AT3G12270 | PRMT3 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.34 x 10-4 | 1.209 | 51 | 0 | 66 | 36 | 100.00% | 35.29% | 51 | 102 | 16.261 | 8.44 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.33' |
| AT3G12260 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||||
| AT3G12260 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .19 | |||||
| AT3G12260 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||||
| AT3G12260 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||||
| AT3G12260 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' |