| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G18130 | RACK1C_AT | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.28 x 10-3 | 1.027 | 676 | 409 | 192 | 634 | 62.30% | 76.76% | 1085 | 826 | 1.504 | 4.96 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' |
| AT3G18130 | RACK1C_AT | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 6.57 x 10-5 | 1.211 | 270 | 89 | 71 | 189 | 75.21% | 72.69% | 359 | 260 | 0.605 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' | |
| AT3G18130 | RACK1C_AT | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.46 x 10-17 | 1.371 | 1736 | 846 | 674 | 2133 | 67.23% | 75.99% | 2582 | 2807 | 1.303 | 9.38 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' |
| AT3G18130 | RACK1C_AT | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0813 | 1212 | 698 | 318 | 873 | 63.46% | 73.30% | 1910 | 1191 | 1.267 | 1.12 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' | |
| AT3G18120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT3G18120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT3G18120 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT3G18120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT3G18120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT3G18120 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT3G18120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT3G18120 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .01 | |||||
| AT3G18120 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||||
| AT3G18110 | EMB1270 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.01 x 10-15 | 2.238 | 506 | 27 | 253 | 213 | 94.93% | 45.71% | 533 | 466 | 12.63 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' |
| AT3G18110 | EMB1270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0697 | 51 | 41 | 67 | 120 | 55.43% | 64.17% | 92 | 187 | 0.34 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.5 | ||
| AT3G18110 | EMB1270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 6 | 16 | 0 | 0 | 27.27% | 22 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | |||
| AT3G18110 | EMB1270 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.333 | 186 | 82 | 92 | 196 | 69.40% | 68.06% | 268 | 288 | 0.884 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | ||
| AT3G18110 | EMB1270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.313 | 119 | 56 | 168 | 402 | 68.00% | 70.53% | 175 | 570 | 0.71 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | ||
| AT3G18110 | EMB1270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 0.469 | 90 | 35 | 19 | 44 | 72.00% | 69.84% | 125 | 63 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | ||
| AT3G18110 | EMB1270 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.547 | 397 | 174 | 365 | 706 | 69.53% | 65.92% | 571 | 1071 | 0.275 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | ||
| AT3G18110 | EMB1270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.14 x 10-4 | 1.129 | 154 | 28 | 94 | 149 | 84.62% | 61.32% | 182 | 243 | 1.798 | 2.17 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' |
| AT3G18110 | EMB1270 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 0.0973 | 0 | 13 | 1 | 0 | 0.00% | 0.00% | 13 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | ||
| AT3G18100 | MYB4R1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | ||||
| AT3G18100 | MYB4R1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.708 | 203 | 105 | 136 | 314 | 65.91% | 69.78% | 308 | 450 | 0.428 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | ||
| AT3G18100 | MYB4R1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.13 x 10-3 | 1.144 | 66 | 117 | 55 | 187 | 36.07% | 77.27% | 183 | 242 | 3.307 | 3.35 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' |
| AT3G18100 | MYB4R1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | ||||
| AT3G18100 | MYB4R1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.551 | 35 | 17 | 37 | 102 | 67.31% | 73.38% | 52 | 139 | 0.663 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.3 | ||
| AT3G18100 | MYB4R1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.21 x 10-12 | 2.409 | 434 | 13 | 192 | 120 | 97.09% | 38.46% | 447 | 312 | 24.67 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' |
| AT3G18100 | MYB4R1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | ||||
| AT3G18100 | MYB4R1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.393 | 79 | 32 | 86 | 182 | 71.17% | 67.91% | 111 | 268 | 0.763 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | ||
| AT3G18100 | MYB4R1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 5.31 x 10-20 | 2.283 | 352 | 78 | 118 | 375 | 81.86% | 76.06% | 430 | 493 | 0.0509 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | |
| AT3G18090 | NRPD2B | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 8.1 x 10-14 | 1.714 | 416 | 326 | 74 | 585 | 56.06% | 88.77% | 742 | 659 | 4.211 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' |
| AT3G18090 | NRPD2B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.95 x 10-5 | 1.198 | 328 | 291 | 245 | 1397 | 52.99% | 85.08% | 619 | 1642 | 3.773 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' |
| AT3G18090 | NRPD2B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' | ||||
| AT3G18090 | NRPD2B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 1.99 x 10-15 | 2.212 | 103 | 391 | 165 | 771 | 20.85% | 82.37% | 494 | 936 | 12.075 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' |
| AT3G18090 | NRPD2B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' | ||||
| AT3G18090 | NRPD2B | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.74 x 10-17 | 1.543 | 744 | 632 | 276 | 1826 | 54.07% | 86.87% | 1376 | 2102 | 4.454 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' |
| AT3G18090 | NRPD2B | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 0.0 | 4.71 | 709 | 77 | 260 | 774 | 90.20% | 74.85% | 786 | 1034 | 2.126 | 2.38 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' |
| AT3G18090 | NRPD2B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.889 | 189 | 162 | 154 | 560 | 53.85% | 78.43% | 351 | 714 | 2.115 | 7.34 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .32 | |
| AT3G18090 | NRPD2B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.32' | ||||
| AT3G18080 | BGLU44 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.46 x 10-8 | 1.131 | 5106 | 2520 | 1538 | 2401 | 66.96% | 60.95% | 7626 | 3939 | 1.161 | 6.92 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.99' |
| AT3G18080 | BGLU44 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.29 x 10-12 | 1.155 | 6155 | 1146 | 6498 | 6165 | 84.30% | 48.69% | 7301 | 12663 | 5.133 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -2.99 |
| AT3G18080 | BGLU44 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.396 | 8477 | 1307 | 5200 | 3094 | 86.64% | 37.30% | 9784 | 8294 | 9.836 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.99' | |
| AT3G18080 | BGLU44 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 9037 | 2729 | 2521 | 3024 | 76.81% | 54.54% | 11766 | 5545 | 2.509 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.99' | |
| AT3G18080 | BGLU44 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.54 x 10-9 | 1.097 | 6952 | 1459 | 11204 | 11205 | 82.65% | 50.00% | 8411 | 22409 | 4.387 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.99' |
| AT3G18080 | BGLU44 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.118 | 4626 | 1696 | 1154 | 1828 | 73.17% | 61.30% | 6322 | 2982 | 1.513 | 1.6 x 10-29 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.99' | |
| AT3G18080 | BGLU44 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.39 x 10-23 | 1.176 | 14614 | 4403 | 6091 | 9220 | 76.85% | 60.22% | 19017 | 15311 | 2.053 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.99' |
| AT3G18080 | BGLU44 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.391 | 3209 | 946 | 3465 | 3929 | 77.23% | 53.14% | 4155 | 7394 | 2.658 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.99' | |
| AT3G18080 | BGLU44 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.04 x 10-4 | 1.049 | 3037 | 1056 | 957 | 1622 | 74.20% | 62.89% | 4093 | 2579 | 1.461 | 1.58 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.99' |
| AT3G18070 | BGLU43 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | PEG | not imprinted | 1.64 x 10-9 | 18.688 | 29 | 34 | 25 | 0 | 46.03% | 0.00% | 63 | 25 | 3.399 | 1.47 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' |
| AT3G18070 | BGLU43 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.329 | 13 | 65 | 8 | 316 | 16.67% | 97.53% | 78 | 324 | 55.186 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | |
| AT3G18070 | BGLU43 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.15 | 2 | 79 | 28 | 909 | 2.47% | 97.01% | 81 | 937 | 238.53 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | |
| AT3G18070 | BGLU43 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 3.37 x 10-16 | 7.801 | 47 | 68 | 0 | 251 | 40.87% | 100.00% | 115 | 251 | 65.319 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' |
| AT3G18070 | BGLU43 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.011 | 1.352 | 17 | 39 | 25 | 808 | 30.36% | 97.00% | 56 | 833 | 28.458 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.21 |
| AT3G18070 | BGLU43 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | |||
| AT3G18070 | BGLU43 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.84 x 10-3 | 0.0 | 13 | 167 | 0 | 246 | 7.22% | 100.00% | 180 | 246 | 471.255 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' |
| AT3G18070 | BGLU43 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.015 | 1.181 | 20 | 102 | 27 | 1527 | 16.39% | 98.26% | 122 | 1554 | 122.9 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' |
| AT3G18070 | BGLU43 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 26 | 3 | 7 | 4 | 89.66% | 36.36% | 29 | 11 | 1.528 | 6.93 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.21' | |
| AT3G18060 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0348 | 0.0 | 1045 | 480 | 295 | 679 | 68.52% | 69.71% | 1525 | 974 | 0.778 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.43' | ||
| AT3G18060 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.87 x 10-5 | 1.131 | 814 | 291 | 1193 | 2364 | 73.67% | 66.46% | 1105 | 3557 | 1.152 | 3.04 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.43' | |
| AT3G18060 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.16 x 10-15 | 1.391 | 1390 | 480 | 1714 | 1430 | 74.33% | 45.48% | 1870 | 3144 | 2.917 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.43' | |
| AT3G18060 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.303 | 806 | 160 | 759 | 542 | 83.44% | 41.66% | 966 | 1301 | 5.334 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.43' | ||
| AT3G18060 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 6.85 x 10-15 | 1.38 | 1389 | 726 | 392 | 1384 | 65.67% | 77.93% | 2115 | 1776 | 1.508 | 1.37 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.43' | |
| AT3G18060 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.13 x 10-19 | 1.384 | 2018 | 491 | 1737 | 2742 | 80.43% | 61.22% | 2509 | 4479 | 2.222 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.43' | |
| AT3G18060 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 6.06 x 10-6 | 1.155 | 1043 | 417 | 314 | 741 | 71.44% | 70.24% | 1460 | 1055 | 0.635 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.43' | ||
| AT3G18060 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 4.58 x 10-4 | 1.09 | 545 | 229 | 658 | 1541 | 70.41% | 70.08% | 774 | 2199 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .43 | ||
| AT3G18060 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 1.906 | 3143 | 218 | 1543 | 1013 | 93.51% | 39.63% | 3361 | 2556 | 17.687 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.43' | |
| AT3G18050 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 66 | 0 | 41 | 0 | 100.00% | 0.00% | 66 | 41 | 183.373 | 4.0 x 10-30 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT3G18050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | paternally biased | not imprinted | 1.27 x 10-6 | 2.399 | 43 | 36 | 63 | 38 | 54.43% | 37.62% | 79 | 101 | 0.0827 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .24 | ||
| AT3G18050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||||
| AT3G18050 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 45 | 100.00% | 0 | 45 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||||
| AT3G18050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.24 x 10-3 | 1.261 | 60 | 28 | 84 | 57 | 68.18% | 40.43% | 88 | 141 | 1.448 | 1.9 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |
| AT3G18050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.72 | 10 | 7 | 1 | 0 | 58.82% | 0.00% | 17 | 1 | 0.69 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |||
| AT3G18050 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.995 | 33 | 9 | 17 | 23 | 78.57% | 57.50% | 42 | 40 | 0.123 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | |||
| AT3G18050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.576 | 109 | 23 | 30 | 33 | 82.58% | 52.38% | 132 | 63 | 1.69 | 4.6 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||
| AT3G18050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 8 | 0 | 0 | 0 | 100.00% | 8 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.24' | ||||
| AT3G18040 | MPK9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 3.16 x 10-22 | 9.948 | 116 | 57 | 0 | 103 | 67.05% | 100.00% | 173 | 103 | 9.608 | 1.77 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.33' |
| AT3G18040 | MPK9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0186 | 0.0 | 37 | 13 | 42 | 153 | 74.00% | 78.46% | 50 | 195 | 0.746 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.33' | |
| AT3G18040 | MPK9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | PEG | not imprinted | 1.22 x 10-17 | 307.384 | 0 | 63 | 18 | 0 | 0.00% | 0.00% | 63 | 18 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.33' | |
| AT3G18040 | MPK9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 3.38 x 10-5 | 1.374 | 81 | 43 | 13 | 97 | 65.32% | 88.18% | 124 | 110 | 1.549 | 1.13 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.33' |
| AT3G18040 | MPK9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | not imprinted | 1.0 | 1 | 1 | 3 | 5 | 50.00% | 62.50% | 2 | 8 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .33 | ||
| AT3G18040 | MPK9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.14 x 10-6 | 2.401 | 17 | 0 | 32 | 103 | 100.00% | 76.30% | 17 | 135 | 0.0 | 0.0349 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.33' |
| AT3G18040 | MPK9 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.47 x 10-14 | 5.681 | 89 | 80 | 0 | 106 | 52.66% | 100.00% | 169 | 106 | 18.36 | 2.88 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.33' |
| AT3G18040 | MPK9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.509 | 33 | 29 | 9 | 19 | 53.23% | 67.86% | 62 | 28 | 0.471 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.33' | ||
| AT3G18040 | MPK9 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.466 | 4 | 2 | 6 | 35 | 66.67% | 85.37% | 6 | 41 | 0.395 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.33' | ||
| AT3G18035 | HON4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 5.68 x 10-3 | 1.007 | 2889 | 677 | 2210 | 2404 | 81.02% | 52.10% | 3566 | 4614 | 3.406 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.26' |
| AT3G18035 | HON4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.909 | 1529 | 844 | 366 | 782 | 64.43% | 68.12% | 2373 | 1148 | 0.0953 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.26' | ||
| AT3G18035 | HON4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0833 | 1416 | 169 | 987 | 554 | 89.34% | 35.95% | 1585 | 1541 | 11.471 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.26' | |
| AT3G18035 | HON4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0107 | 0.0 | 1421 | 372 | 829 | 1045 | 79.25% | 55.76% | 1793 | 1874 | 2.468 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.26' |
| AT3G18035 | HON4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.202 | 4276 | 808 | 4190 | 3389 | 84.11% | 44.72% | 5084 | 7579 | 5.8 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.26' | |
| AT3G18035 | HON4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.73 x 10-25 | 1.497 | 4476 | 485 | 1980 | 1509 | 90.22% | 43.25% | 4961 | 3489 | 10.313 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.26' |
| AT3G18035 | HON4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.47 x 10-3 | 1.028 | 2225 | 515 | 1609 | 1222 | 81.20% | 43.16% | 2740 | 2831 | 4.799 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.26' |
| AT3G18035 | HON4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.444 | 755 | 277 | 543 | 737 | 73.16% | 57.58% | 1032 | 1280 | 1.567 | 3.06 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.26' | |
| AT3G18035 | HON4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 7.74 x 10-5 | 1.101 | 1410 | 457 | 1392 | 1369 | 75.52% | 49.58% | 1867 | 2761 | 2.62 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.26 |
| AT3G18030 | HAL3A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.58 | ||||
| AT3G18030 | HAL3A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | paternally biased | not imprinted | 7.42 x 10-18 | 2.349 | 310 | 236 | 200 | 179 | 56.78% | 47.23% | 546 | 379 | 1.013 | 8.32 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' |
| AT3G18030 | HAL3A | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.03 x 10-4 | 1.181 | 292 | 204 | 186 | 307 | 58.87% | 62.27% | 496 | 493 | 0.33 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' | |
| AT3G18030 | HAL3A | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.1 x 10-4 | 1.135 | 349 | 238 | 149 | 248 | 59.45% | 62.47% | 587 | 397 | 0.427 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' | |
| AT3G18030 | HAL3A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.209 | 174 | 43 | 81 | 118 | 80.18% | 59.30% | 217 | 199 | 1.503 | 2.65 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' | |
| AT3G18030 | HAL3A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.58' |