| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G26090 | RGS1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 7.75 x 10-8 | 2.259 | 108 | 8 | 18 | 42 | 93.10% | 70.00% | 116 | 60 | 1.659 | 1.2 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.55' |
| AT3G26090 | RGS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 8.23 x 10-6 | 1.658 | 69 | 7 | 82 | 154 | 90.79% | 65.25% | 76 | 236 | 1.881 | 4.15 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.55 |
| AT3G26090 | RGS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.449 | 266 | 107 | 101 | 130 | 71.31% | 56.28% | 373 | 231 | 1.191 | 1.14 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.55' | |
| AT3G26090 | RGS1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | paternally biased | not imprinted | 9.42 x 10-10 | 2.414 | 100 | 91 | 72 | 58 | 52.36% | 44.62% | 191 | 130 | 0.267 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.55' | |
| AT3G26090 | RGS1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 308 | 192 | 187 | 470 | 61.60% | 71.54% | 500 | 657 | 1.105 | 1.39 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.55' | |
| AT3G26090 | RGS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.71 x 10-3 | 1.193 | 40 | 5 | 159 | 283 | 88.89% | 64.03% | 45 | 442 | 1.507 | 0.0015 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.55' |
| AT3G26090 | RGS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.045 | 0.0 | 77 | 0 | 14 | 3 | 100.00% | 17.65% | 77 | 17 | 28.809 | 1.54 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.55' |
| AT3G26085 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 25 | 0 | 0 | 0 | 100.00% | 25 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | ||||
| AT3G26085 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.774 | 31 | 24 | 11 | 39 | 56.36% | 78.00% | 55 | 50 | 0.0 | 0.0338 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | ||
| AT3G26085 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.28 | 10 | 5 | 85 | 90 | 66.67% | 51.43% | 15 | 175 | 0.424 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |||
| AT3G26085 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 30 | 10 | 40 | 50 | 75.00% | 55.56% | 40 | 90 | 0.109 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |||
| AT3G26085 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 6 | 0 | 44 | 0 | 100.00% | 0.00% | 6 | 44 | 17.89 | 1.87 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | ||
| AT3G26085 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.07 x 10-15 | 6.227 | 106 | 0 | 62 | 78 | 100.00% | 55.71% | 106 | 140 | 15.738 | 1.64 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |
| AT3G26085 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0164 | 1.151 | 121 | 4 | 16 | 13 | 96.80% | 44.83% | 125 | 29 | 6.971 | 1.24 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | |
| AT3G26085 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.36 | 48 | 3 | 61 | 34 | 94.12% | 35.79% | 51 | 95 | 6.246 | 9.74 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .3 | ||
| AT3G26085 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.254 | 146 | 0 | 33 | 2 | 100.00% | 5.71% | 146 | 35 | 166.252 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.3' | ||
| AT3G26080 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0372 | 0.0 | 49 | 40 | 44 | 281 | 55.06% | 86.46% | 89 | 325 | 2.51 | 8.61 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.11 | |
| AT3G26080 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.951 | 102 | 116 | 25 | 102 | 46.79% | 80.31% | 218 | 127 | 2.306 | 6.16 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||
| AT3G26080 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.297 | 20 | 22 | 6 | 56 | 47.62% | 90.32% | 42 | 62 | 2.493 | 1.19 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||
| AT3G26080 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.65 x 10-5 | 1.35 | 212 | 124 | 17 | 111 | 63.10% | 86.72% | 336 | 128 | 1.847 | 6.65 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |
| AT3G26080 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 128 | 100.00% | 0 | 128 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||||
| AT3G26080 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.654 | 37 | 68 | 47 | 292 | 35.24% | 86.14% | 105 | 339 | 5.644 | 7.4 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||
| AT3G26080 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 43 | 96 | 69.06% | 0 | 139 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||||
| AT3G26080 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.38 x 10-6 | 1.426 | 97 | 83 | 42 | 377 | 53.89% | 89.98% | 180 | 419 | 4.175 | 5.86 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |
| AT3G26080 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.587 | 172 | 88 | 164 | 296 | 66.15% | 64.35% | 260 | 460 | 0.792 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||
| AT3G26070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.987 | 1759 | 276 | 636 | 404 | 86.44% | 38.85% | 2035 | 1040 | 7.803 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||
| AT3G26070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.76 x 10-20 | 2.308 | 803 | 36 | 538 | 355 | 95.71% | 39.75% | 839 | 893 | 21.206 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |
| AT3G26070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.534 | 2231 | 954 | 480 | 760 | 70.05% | 61.29% | 3185 | 1240 | 1.221 | 3.25 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||
| AT3G26070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.254 | 466 | 218 | 442 | 962 | 68.13% | 68.52% | 684 | 1404 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.11 | |||
| AT3G26070 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0494 | 0.0 | 247 | 96 | 160 | 177 | 72.01% | 52.52% | 343 | 337 | 1.485 | 4.1 x 10-7 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |
| AT3G26070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0112 | 1.006 | 2478 | 254 | 786 | 244 | 90.70% | 23.69% | 2732 | 1030 | 23.929 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |
| AT3G26070 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0781 | 387 | 223 | 203 | 593 | 63.44% | 74.50% | 610 | 796 | 1.218 | 3.68 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||
| AT3G26070 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.643 | 495 | 278 | 659 | 1396 | 64.04% | 67.93% | 773 | 2055 | 0.107 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||
| AT3G26070 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.14 x 10-6 | 1.243 | 392 | 173 | 170 | 530 | 69.38% | 75.71% | 565 | 700 | 0.0 | 0.016 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |
| AT3G26060 | PRXQ | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.27 x 10-8 | 1.283 | 541 | 239 | 286 | 863 | 69.36% | 75.11% | 780 | 1149 | 1.002 | 7.19 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.93' |
| AT3G26060 | PRXQ | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0544 | 1402 | 500 | 451 | 543 | 73.71% | 54.63% | 1902 | 994 | 1.856 | 6.83 x 10-24 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.93' | |
| AT3G26060 | PRXQ | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 0.0 | 3.632 | 446 | 113 | 122 | 669 | 79.79% | 84.58% | 559 | 791 | 0.0 | 0.0349 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.93' |
| AT3G26060 | PRXQ | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 26 | 9 | 293 | 404 | 74.29% | 57.96% | 35 | 697 | 0.144 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.93' | ||
| AT3G26060 | PRXQ | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.203 | 1130 | 685 | 854 | 1873 | 62.26% | 68.68% | 1815 | 2727 | 1.115 | 3.71 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.93' | |
| AT3G26060 | PRXQ | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 9.02 x 10-15 | 6.017 | 103 | 0 | 53 | 68 | 100.00% | 56.20% | 103 | 121 | 14.621 | 3.61 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.93' |
| AT3G26060 | PRXQ | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.05 x 10-18 | 1.549 | 1521 | 555 | 938 | 728 | 73.27% | 43.70% | 2076 | 1666 | 2.909 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.93' |
| AT3G26060 | PRXQ | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.69 x 10-3 | 1.324 | 146 | 21 | 203 | 40 | 87.43% | 16.46% | 167 | 243 | 15.997 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.93 |
| AT3G26060 | PRXQ | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0334 | 0.0 | 3052 | 1344 | 717 | 1082 | 69.43% | 60.14% | 4396 | 1799 | 1.284 | 4.5 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.93' |
| AT3G26050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0329 | 0.0 | 666 | 193 | 114 | 192 | 77.53% | 62.75% | 859 | 306 | 1.385 | 6.53 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |
| AT3G26050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.58 x 10-3 | 1.136 | 86 | 26 | 54 | 156 | 76.79% | 74.29% | 112 | 210 | 0.869 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.05 | ||
| AT3G26050 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.158 | 238 | 240 | 215 | 1072 | 49.79% | 83.29% | 478 | 1287 | 3.631 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||
| AT3G26050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 3.19 x 10-16 | 1.875 | 692 | 192 | 103 | 314 | 78.28% | 75.30% | 884 | 417 | 0.32 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | ||
| AT3G26050 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 0.0 | 9.202 | 374 | 23 | 90 | 389 | 94.21% | 81.21% | 397 | 479 | 1.97 | 7.29 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |
| AT3G26050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0154 | 1.056 | 56 | 61 | 154 | 367 | 47.86% | 70.44% | 117 | 521 | 1.5 | 3.41 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |
| AT3G26050 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.48 x 10-4 | 1.29 | 77 | 69 | 230 | 393 | 52.74% | 63.08% | 146 | 623 | 0.0 | 0.0344 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |
| AT3G26050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.18 x 10-6 | 1.535 | 279 | 97 | 157 | 87 | 74.20% | 35.66% | 376 | 244 | 3.174 | 1.29 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |
| AT3G26050 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.395 | 77 | 26 | 79 | 140 | 74.76% | 63.93% | 103 | 219 | 0.075 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.05' | |||
| AT3G26040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 5 | 0 | 0.00% | 0 | 5 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.09' | ||||
| AT3G26040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | no data | 4.81 x 10-7 | 3.439 | 7 | 0 | 0 | 29 | 100.00% | 100.00% | 7 | 29 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.09' | ||
| AT3G26040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.839 | 2 | 5 | 2 | 12 | 28.57% | 85.71% | 7 | 14 | 0.0 | 0.046 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .09 | ||
| AT3G26040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.914 | 10 | 3 | 3 | 5 | 76.92% | 62.50% | 13 | 8 | 0.867 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.09' | |||
| AT3G26040 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 13 | 0 | 0.00% | 0 | 13 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.09' | ||||
| AT3G26040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 12 | 0 | 0 | 0 | 100.00% | 12 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.09' | ||||
| AT3G26040 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.962 | 13 | 6 | 12 | 29 | 68.42% | 70.73% | 19 | 41 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.09' | |||
| AT3G26040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 0.0953 | 3 | 0 | 1 | 8 | 100.00% | 88.89% | 3 | 9 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.09' | |||
| AT3G26040 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 68 | 28 | 29.17% | 0 | 96 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.09' | ||||
| AT3G26030 | ATB' DELTA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.126 | 126 | 44 | 35 | 26 | 74.12% | 42.62% | 170 | 61 | 1.658 | 2.32 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.48' | |
| AT3G26030 | ATB' DELTA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.169 | 105 | 90 | 24 | 52 | 53.85% | 68.42% | 195 | 76 | 0.055 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.48' | ||
| AT3G26030 | ATB' DELTA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0069 | 1.046 | 129 | 69 | 54 | 57 | 65.15% | 51.35% | 198 | 111 | 0.0 | 0.0312 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.48' |
| AT3G26030 | ATB' DELTA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 15 | 67 | 81.71% | 0 | 82 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.48' | |||
| AT3G26030 | ATB' DELTA | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0117 | 0.0 | 157 | 46 | 96 | 197 | 77.34% | 67.24% | 203 | 293 | 0.0 | 0.0396 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.48' |
| AT3G26030 | ATB' DELTA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 4.62 x 10-3 | 0.0 | 28 | 97 | 1 | 104 | 22.40% | 99.05% | 125 | 105 | 41.615 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.48' |
| AT3G26030 | ATB' DELTA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 21 | 100.00% | 0 | 21 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.48' | |||
| AT3G26030 | ATB' DELTA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 33 | 25 | 6 | 21 | 56.90% | 77.78% | 58 | 27 | 0.223 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.48' | ||
| AT3G26030 | ATB' DELTA | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.0123 | 0.0 | 17 | 1 | 6 | 16 | 94.44% | 72.73% | 18 | 22 | 0.211 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.48 | |
| AT3G26020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.673 | 63 | 28 | 61 | 136 | 69.23% | 69.04% | 91 | 197 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .15 | |||
| AT3G26020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 286 | 162 | 77 | 175 | 63.84% | 69.44% | 448 | 252 | 0.304 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |||
| AT3G26020 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0807 | 7 | 5 | 3 | 46 | 58.33% | 93.88% | 12 | 49 | 1.211 | 0.0152 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | ||
| AT3G26020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 3.28 x 10-8 | 1.706 | 137 | 119 | 133 | 169 | 53.52% | 55.96% | 256 | 302 | 0.707 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | ||
| AT3G26020 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | PEG | not imprinted | 1.1 x 10-11 | 22.674 | 39 | 41 | 32 | 0 | 48.75% | 0.00% | 80 | 32 | 5.129 | 1.3 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |
| AT3G26020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.88 | 33 | 14 | 185 | 366 | 70.21% | 66.42% | 47 | 551 | 0.77 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |||
| AT3G26020 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 9.49 x 10-3 | 0.0 | 19 | 0 | 22 | 18 | 100.00% | 45.00% | 19 | 40 | 3.274 | 4.35 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |
| AT3G26020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.21 | 124 | 22 | 79 | 81 | 84.93% | 50.62% | 146 | 160 | 2.575 | 3.64 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | ||
| AT3G26020 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0628 | 120 | 29 | 41 | 70 | 80.54% | 63.06% | 149 | 111 | 1.104 | 3.46 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | ||
| AT3G26010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.125 | 34 | 14 | 14 | 48 | 70.83% | 77.42% | 48 | 62 | 0.609 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | |||
| AT3G26010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.06 x 10-6 | 1.748 | 79 | 0 | 88 | 43 | 100.00% | 32.82% | 79 | 131 | 29.284 | 1.54 x 10-25 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | |
| AT3G26010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.565 | 137 | 34 | 44 | 30 | 80.12% | 40.54% | 171 | 74 | 2.568 | 2.67 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | ||
| AT3G26010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0533 | 36 | 4 | 77 | 93 | 90.00% | 54.71% | 40 | 170 | 2.046 | 9.79 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.68 | ||
| AT3G26010 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 9.32 x 10-7 | 2.238 | 24 | 0 | 20 | 48 | 100.00% | 70.59% | 24 | 68 | 1.554 | 2.13 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | |
| AT3G26010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 1.05 x 10-13 | 2.44 | 184 | 24 | 57 | 150 | 88.46% | 72.46% | 208 | 207 | 1.41 | 7.55 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | |
| AT3G26010 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.36 x 10-4 | 1.554 | 47 | 44 | 54 | 60 | 51.65% | 52.63% | 91 | 114 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | ||
| AT3G26010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 7.85 x 10-5 | 1.658 | 45 | 27 | 110 | 74 | 62.50% | 40.22% | 72 | 184 | 1.151 | 6.15 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | |
| AT3G26010 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.15 | 103 | 11 | 14 | 13 | 90.35% | 48.15% | 114 | 27 | 2.614 | 5.71 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.68' | ||
| AT3G26000 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.25 x 10-10 | 1.696 | 274 | 163 | 209 | 199 | 62.70% | 48.77% | 437 | 408 | 1.198 | 7.76 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |
| AT3G26000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 0.0 | 6.782 | 328 | 36 | 42 | 244 | 90.11% | 85.31% | 364 | 286 | 0.0924 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | ||
| AT3G26000 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.86 x 10-4 | 1.126 | 325 | 55 | 148 | 186 | 85.53% | 55.69% | 380 | 334 | 2.851 | 3.76 x 10-18 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |
| AT3G26000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.959 | 26 | 12 | 43 | 86 | 68.42% | 66.67% | 38 | 129 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |||
| AT3G26000 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.782 | 361 | 190 | 245 | 553 | 65.52% | 69.30% | 551 | 798 | 0.281 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |||
| AT3G26000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.46 x 10-21 | 10.232 | 171 | 0 | 58 | 75 | 100.00% | 56.39% | 171 | 133 | 24.476 | 1.32 x 10-24 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |
| AT3G26000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.488 | 273 | 97 | 242 | 386 | 73.78% | 61.46% | 370 | 628 | 1.193 | 1.65 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | ||
| AT3G26000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0117 | 1.219 | 25 | 35 | 45 | 87 | 41.67% | 65.91% | 60 | 132 | 1.139 | 8.41 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.44 | |
| AT3G26000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0857 | 395 | 173 | 92 | 225 | 69.54% | 70.98% | 568 | 317 | 0.927 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.44' | |||
| AT3G25990 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.426 | 30 | 23 | 9 | 11 | 56.60% | 55.00% | 53 | 20 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.9' | |||
| AT3G25990 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.67 | 1 | 0 | 12 | 32 | 100.00% | 72.73% | 1 | 44 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.9 | |||
| AT3G25990 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.712 | 2 | 0 | 224 | 341 | 100.00% | 60.35% | 2 | 565 | 0.7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.9' |