| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G02010 | SEC1A | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 1.23 x 10-11 | 32 | 0 | 0 | 58 | 100.00% | 100.00% | 32 | 58 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G02000 | GAE2 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 8.12 x 10-16 | 73 | 0 | 0 | 44 | 100.00% | 100.00% | 73 | 44 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01990 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 377 | 9 | 3 | 444 | 97.67% | 99.33% | 386 | 447 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01980 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | paternally biased | 0.0263 | 0 | 4 | 12 | 0 | 0.00% | 0.00% | 4 | 12 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01970 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 5.47 x 10-8 | 32 | 2 | 1 | 40 | 94.12% | 97.56% | 34 | 41 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01960 | EDA10 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 878 | 17 | 19 | 683 | 98.10% | 97.29% | 895 | 702 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01950 | ARK2 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 1.07 x 10-8 | 43 | 4 | 0 | 91 | 91.49% | 100.00% | 47 | 91 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01930 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 210 | 8 | 5 | 257 | 96.33% | 98.09% | 218 | 262 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01920 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 8.28 x 10-10 | 38 | 2 | 4 | 71 | 95.00% | 94.67% | 40 | 75 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01910 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 161 | 2 | 4 | 126 | 98.77% | 96.92% | 163 | 130 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01880 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 1.18 x 10-3 | 35 | 0 | 0 | 9 | 100.00% | 100.00% | 35 | 9 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01860 | PFC1 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 6.62 x 10-4 | 14 | 1 | 1 | 14 | 93.33% | 93.33% | 15 | 15 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01840 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 2.61 x 10-3 | 14 | 0 | 0 | 8 | 100.00% | 100.00% | 14 | 8 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01830 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 211 | 2 | 0 | 363 | 99.06% | 100.00% | 213 | 363 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01820 | PEX11C | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 7.45 x 10-9 | 35 | 0 | 0 | 24 | 100.00% | 100.00% | 35 | 24 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01800 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 3.11 x 10-13 | 51 | 0 | 2 | 49 | 100.00% | 96.08% | 51 | 51 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01790 | KEA1 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 179 | 7 | 7 | 191 | 96.24% | 96.46% | 186 | 198 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01780 | PLIM2b | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 1.13 x 10-15 | 92 | 7 | 9 | 89 | 92.93% | 90.82% | 99 | 98 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01770 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 1.19 x 10-5 | 27 | 1 | 2 | 24 | 96.43% | 92.31% | 28 | 26 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01750 | ADF11 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 2.56 x 10-3 | 12 | 1 | 1 | 21 | 92.31% | 95.45% | 13 | 22 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01740 | BSK4 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 2.41 x 10-4 | 11 | 0 | 0 | 15 | 100.00% | 100.00% | 11 | 15 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01730 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 185 | 1 | 4 | 201 | 99.46% | 98.05% | 186 | 205 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01720 | ATAF1 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 492 | 6 | 6 | 393 | 98.80% | 98.50% | 498 | 399 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01710 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 1217 | 13 | 3 | 1534 | 98.94% | 99.80% | 1230 | 1537 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01690 | PRD3 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 3.45 x 10-22 | 128 | 3 | 8 | 108 | 97.71% | 93.10% | 131 | 116 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01670 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 139 | 4 | 2 | 219 | 97.20% | 99.10% | 143 | 221 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01660 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 2.41 x 10-4 | 14 | 0 | 0 | 11 | 100.00% | 100.00% | 14 | 11 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01650 | SPPL4 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 3.36 x 10-26 | 91 | 1 | 1 | 82 | 98.91% | 98.80% | 92 | 83 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01610 | GPAT4 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 1216 | 11 | 2 | 3342 | 99.10% | 99.94% | 1227 | 3344 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01570 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 5.01 x 10-3 | 26 | 6 | 17 | 56 | 81.25% | 76.71% | 32 | 73 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01550 | BPS1 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 4159 | 67 | 29 | 10777 | 98.41% | 99.73% | 4226 | 10806 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01540 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 922 | 17 | 22 | 778 | 98.19% | 97.25% | 939 | 800 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01530 | AGL28 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | MEG | 0.0216 | 8 | 0 | 9 | 30 | 100.00% | 76.92% | 8 | 39 | TAIR8 |
Validated?: 'accession dependent' Imprinted in which accessions?: 'Bur' |
|||
| AT1G01510 | AN | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 133 | 0 | 0 | 127 | 100.00% | 100.00% | 133 | 127 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01500 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 1.76 x 10-11 | 38 | 1 | 7 | 69 | 97.44% | 90.79% | 39 | 76 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01490 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 5.91 x 10-3 | 24 | 2 | 2 | 14 | 92.31% | 87.50% | 26 | 16 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01448 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 7.45 x 10-9 | 39 | 0 | 0 | 24 | 100.00% | 100.00% | 39 | 24 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01440 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 3.69 x 10-8 | 37 | 0 | 0 | 22 | 100.00% | 100.00% | 37 | 22 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01430 | TBL25 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 789 | 1 | 1 | 346 | 99.87% | 99.71% | 790 | 347 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01420 | UGT72B3 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 9.01 x 10-15 | 41 | 0 | 0 | 109 | 100.00% | 100.00% | 41 | 109 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01370 | HTR12 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 4.5 x 10-6 | 51 | 9 | 15 | 68 | 85.00% | 81.93% | 60 | 83 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01350 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 308 | 14 | 10 | 348 | 95.65% | 97.21% | 322 | 358 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01340 | CNGC10 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 2.01 x 10-6 | 28 | 1 | 0 | 17 | 96.55% | 100.00% | 29 | 17 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01320 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 4.89 x 10-9 | 40 | 3 | 1 | 31 | 93.02% | 96.88% | 43 | 32 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01300 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 1957 | 86 | 70 | 3435 | 95.79% | 98.00% | 2043 | 3505 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01290 | CNX3 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 205 | 1 | 4 | 197 | 99.51% | 98.01% | 206 | 201 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01260 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 179 | 5 | 4 | 133 | 97.28% | 97.08% | 184 | 137 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01250 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 1.63 x 10-16 | 46 | 0 | 0 | 92 | 100.00% | 100.00% | 46 | 92 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01240 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 4.6 x 10-17 | 66 | 0 | 2 | 61 | 100.00% | 96.83% | 66 | 63 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01230 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 193 | 4 | 4 | 259 | 97.97% | 98.48% | 197 | 263 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01220 | FKGP | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 7.0 x 10-30 | 135 | 2 | 2 | 100 | 98.54% | 98.04% | 137 | 102 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01180 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 1.01 x 10-5 | 20 | 1 | 6 | 115 | 95.24% | 95.04% | 21 | 121 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01170 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 5.51 x 10-12 | 33 | 0 | 4 | 93 | 100.00% | 95.88% | 33 | 97 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01160 | GIF2 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 421 | 10 | 21 | 334 | 97.68% | 94.08% | 431 | 355 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01140 | CIPK9 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 2.95 x 10-4 | 82 | 0 | 5 | 29 | 100.00% | 85.29% | 82 | 34 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01090 | PDH-E1 ALPHA | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 929 | 25 | 36 | 796 | 97.38% | 95.67% | 954 | 832 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01080 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 5.67 x 10-9 | 37 | 1 | 5 | 48 | 97.37% | 90.57% | 38 | 53 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
||||
| AT1G01060 | LHY | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 1083 | 16 | 8 | 1098 | 98.54% | 99.28% | 1099 | 1106 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01040 | DCL1 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 0.0 | 143 | 0 | 0 | 95 | 100.00% | 100.00% | 143 | 95 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |
|||
| AT1G01010 | NAC001 | whole seeds | Wolff et al. 2011 | A. thaliana Col | A. thaliana Bur-0 | 4 DAP (globular) | N/A | N/A | maternally biased | 1.66 x 10-8 | 23 | 0 | 0 | 24 | 100.00% | 100.00% | 23 | 24 | TAIR8 |
Validated?: 'not tested' Imprinted in which accessions?: 'both' |