| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G58676 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58676 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58676 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58676 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58676 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58670 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 28 | 6 | 27 | 20 | 82.35% | 42.55% | 34 | 47 | 1.514 | 0.0019 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .72 | ||
| AT3G58670 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0281 | 0.0 | 46 | 8 | 26 | 51 | 85.19% | 66.23% | 54 | 77 | 0.0 | 0.0377 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.72' | |
| AT3G58670 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.423 | 48 | 30 | 34 | 62 | 61.54% | 64.58% | 78 | 96 | 0.832 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.72' | |||
| AT3G58670 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.131 | 132 | 40 | 29 | 62 | 76.74% | 68.13% | 172 | 91 | 0.314 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.72' | |||
| AT3G58670 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 7.7 x 10-11 | 4.174 | 66 | 0 | 30 | 46 | 100.00% | 60.53% | 66 | 76 | 7.102 | 9.31 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.72' | |
| AT3G58670 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 7.42 x 10-3 | 0.0 | 36 | 9 | 16 | 53 | 80.00% | 76.81% | 45 | 69 | 0.928 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.72' | ||
| AT3G58670 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0044 | 1.046 | 155 | 58 | 103 | 273 | 72.77% | 72.61% | 213 | 376 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.72' | ||
| AT3G58670 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.154 | 74 | 47 | 25 | 99 | 61.16% | 79.84% | 121 | 124 | 1.131 | 3.21 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.72' | ||
| AT3G58670 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.91 x 10-22 | 10.893 | 133 | 39 | 0 | 70 | 77.33% | 100.00% | 172 | 70 | 3.746 | 7.19 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.72' | |
| AT3G58660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.811 | 31 | 17 | 33 | 59 | 64.58% | 64.13% | 48 | 92 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.83 | |||
| AT3G58660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0178 | 0.0 | 80 | 28 | 57 | 151 | 74.07% | 72.60% | 108 | 208 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT3G58660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0613 | 227 | 126 | 108 | 173 | 64.31% | 61.57% | 353 | 281 | 0.582 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |||
| AT3G58660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0849 | 147 | 81 | 64 | 86 | 64.47% | 57.33% | 228 | 150 | 0.395 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |||
| AT3G58660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0533 | 199 | 50 | 198 | 279 | 79.92% | 58.49% | 249 | 477 | 1.729 | 1.07 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT3G58660 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 2.29 x 10-11 | 2.511 | 117 | 30 | 18 | 113 | 79.59% | 86.26% | 147 | 131 | 0.207 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT3G58660 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 293 | 180 | 155 | 384 | 61.95% | 71.24% | 473 | 539 | 1.05 | 6.38 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | ||
| AT3G58660 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | paternally biased | not imprinted | 1.96 x 10-19 | 3.725 | 148 | 138 | 127 | 76 | 51.75% | 37.44% | 286 | 203 | 1.071 | 2.99 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT3G58660 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0048 | 0.0 | 323 | 33 | 134 | 100 | 90.73% | 42.74% | 356 | 234 | 7.094 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.83' | |
| AT3G58650 | TRM7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.463 | 11 | 7 | 20 | 24 | 61.11% | 54.55% | 18 | 44 | 0.956 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.66 | ||
| AT3G58650 | TRM7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.92 x 10-3 | 1.353 | 19 | 27 | 53 | 89 | 41.30% | 62.68% | 46 | 142 | 0.0 | 0.0372 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.66' |
| AT3G58650 | TRM7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 12 | 29 | 70.73% | 0 | 41 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.66' | |||
| AT3G58650 | TRM7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.66' | ||||
| AT3G58650 | TRM7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.66' | ||||
| AT3G58650 | TRM7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.66' | ||||
| AT3G58650 | TRM7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.826 | 99 | 55 | 111 | 221 | 64.29% | 66.57% | 154 | 332 | 0.851 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.66' | ||
| AT3G58650 | TRM7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0112 | 1.071 | 55 | 68 | 11 | 17 | 44.72% | 60.71% | 123 | 28 | 0.189 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.66' | |
| AT3G58650 | TRM7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 85 | 0 | 44 | 0 | 100.00% | 0.00% | 85 | 44 | 253.442 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.66' | |
| AT3G58640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 8 | 7 | 19 | 63 | 53.33% | 76.83% | 15 | 82 | 0.216 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .03 | |||
| AT3G58640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.94 x 10-3 | 1.344 | 16 | 22 | 63 | 100 | 42.11% | 61.35% | 38 | 163 | 0.0898 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | ||
| AT3G58640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 128 | 80 | 127 | 323 | 61.54% | 71.78% | 208 | 450 | 0.0 | 0.0162 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | ||
| AT3G58640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.44 | 17 | 14 | 7 | 7 | 54.84% | 50.00% | 31 | 14 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||
| AT3G58640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | paternally biased | not imprinted | 1.48 x 10-13 | 16.686 | 102 | 63 | 53 | 1 | 61.82% | 1.85% | 165 | 54 | 10.935 | 3.5 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |
| AT3G58640 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.806 | 109 | 68 | 89 | 203 | 61.58% | 69.52% | 177 | 292 | 0.121 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||
| AT3G58640 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.77 | 102 | 60 | 109 | 230 | 62.96% | 67.85% | 162 | 339 | 0.483 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||
| AT3G58640 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.132 | 118 | 84 | 174 | 379 | 58.42% | 68.54% | 202 | 553 | 0.0 | 0.0179 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | ||
| AT3G58640 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 7.23 x 10-3 | 1.009 | 413 | 107 | 363 | 257 | 79.42% | 41.45% | 520 | 620 | 3.759 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |
| AT3G58630 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.112 | 38 | 7 | 32 | 55 | 84.44% | 63.22% | 45 | 87 | 0.0 | 0.0409 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.02 | ||
| AT3G58630 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.77 x 10-5 | 1.421 | 132 | 14 | 67 | 95 | 90.41% | 58.64% | 146 | 162 | 2.826 | 7.43 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | |
| AT3G58630 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.352 | 64 | 41 | 10 | 39 | 60.95% | 79.59% | 105 | 49 | 0.0 | 0.0373 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | ||
| AT3G58630 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.747 | 24 | 11 | 14 | 19 | 68.57% | 57.58% | 35 | 33 | 0.697 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | |||
| AT3G58630 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.89 x 10-3 | 1.039 | 18 | 1 | 38 | 76 | 94.74% | 66.67% | 19 | 114 | 1.039 | 0.0191 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | |
| AT3G58630 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.192 | 7 | 4 | 11 | 74 | 63.64% | 87.06% | 11 | 85 | 0.0948 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | |||
| AT3G58630 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.93 | 113 | 48 | 72 | 111 | 70.19% | 60.66% | 161 | 183 | 0.146 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | |||
| AT3G58630 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.767 | 236 | 47 | 52 | 36 | 83.39% | 40.91% | 283 | 88 | 3.483 | 3.02 x 10-13 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | ||
| AT3G58630 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.53 x 10-15 | 7.122 | 155 | 2 | 13 | 33 | 98.73% | 71.74% | 157 | 46 | 4.421 | 1.09 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.02' | |
| AT3G58620 | TTL4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 9 | 0 | 1 | 0 | 100.00% | 0.00% | 9 | 1 | 0.203 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.19 | ||
| AT3G58620 | TTL4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 1.0 | 2 | 1 | 5 | 22 | 66.67% | 81.48% | 3 | 27 | 0.645 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | ||
| AT3G58620 | TTL4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 34 | 0 | 0 | 0.00% | 34 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | |||
| AT3G58620 | TTL4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | |||
| AT3G58620 | TTL4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | ||||
| AT3G58620 | TTL4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | no data | 1.0 | 0 | 14 | 0 | 23 | 0.00% | 100.00% | 14 | 23 | 21.82 | 6.25 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | |
| AT3G58620 | TTL4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0405 | 0.0 | 41 | 13 | 4 | 20 | 75.93% | 83.33% | 54 | 24 | 0.739 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | |
| AT3G58620 | TTL4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0824 | 48 | 54 | 0 | 9 | 47.06% | 100.00% | 102 | 9 | 1.791 | 4.63 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | |
| AT3G58620 | TTL4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.1 x 10-5 | 1.707 | 98 | 0 | 20 | 11 | 100.00% | 35.48% | 98 | 31 | 22.576 | 1.26 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' |
| AT3G58610 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.598 | 881 | 328 | 456 | 629 | 72.87% | 57.97% | 1209 | 1085 | 1.521 | 6.48 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.53 | ||
| AT3G58610 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.106 | 1226 | 379 | 1065 | 1495 | 76.39% | 58.40% | 1605 | 2560 | 1.899 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | ||
| AT3G58610 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.19 x 10-6 | 1.358 | 154 | 171 | 189 | 419 | 47.38% | 68.91% | 325 | 608 | 1.669 | 5.05 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |
| AT3G58610 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |||||
| AT3G58610 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |||||
| AT3G58610 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |||||
| AT3G58610 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 9.31 x 10-4 | 1.038 | 2054 | 787 | 1446 | 2663 | 72.30% | 64.81% | 2841 | 4109 | 1.224 | 2.94 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |
| AT3G58610 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | paternally biased | not imprinted | 1.34 x 10-14 | 2.163 | 119 | 193 | 272 | 562 | 38.14% | 67.39% | 312 | 834 | 2.309 | 3.22 x 10-18 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |
| AT3G58610 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 0.0 | 3.027 | 454 | 248 | 591 | 319 | 64.67% | 35.05% | 702 | 910 | 2.536 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |
| AT3G58600 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .2 | ||||
| AT3G58600 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 1 | 2 | 66.67% | 0 | 3 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||||
| AT3G58600 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | no data | 1.19 x 10-14 | 18.263 | 98 | 0 | 0 | 11 | 100.00% | 100.00% | 98 | 11 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||
| AT3G58600 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |||||
| AT3G58600 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |||||
| AT3G58600 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |||||
| AT3G58600 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.309 | 21 | 4 | 9 | 18 | 84.00% | 66.67% | 25 | 27 | 0.35 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |||
| AT3G58600 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 48 | 0 | 9 | 0 | 100.00% | 0.00% | 48 | 9 | 29.275 | 3.64 x 10-10 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||
| AT3G58600 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 7.73 x 10-7 | 2.188 | 40 | 0 | 54 | 65 | 100.00% | 54.62% | 40 | 119 | 6.042 | 5.22 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |
| AT3G58590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.459 | 4 | 0 | 7 | 11 | 100.00% | 61.11% | 4 | 18 | 0.434 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .03 | |||
| AT3G58590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.35 | 3 | 0 | 7 | 16 | 100.00% | 69.57% | 3 | 23 | 0.682 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||
| AT3G58590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 5 | 1 | 16.67% | 0 | 6 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | ||||
| AT3G58590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||||
| AT3G58590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||||
| AT3G58590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||||
| AT3G58590 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.242 | 14 | 16 | 11 | 20 | 46.67% | 64.52% | 30 | 31 | 0.345 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||
| AT3G58590 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||||
| AT3G58590 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.03' | |||||
| AT3G58580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0842 | 11 | 2 | 1 | 8 | 84.62% | 88.89% | 13 | 9 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.31 | |||
| AT3G58580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.92 | 14 | 7 | 25 | 54 | 66.67% | 68.35% | 21 | 79 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.31' | |||
| AT3G58580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.74 x 10-6 | 2.029 | 36 | 0 | 26 | 37 | 100.00% | 58.73% | 36 | 63 | 4.008 | 1.65 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.31' | |
| AT3G58580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.31' | |||||
| AT3G58580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.31' | |||||
| AT3G58580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.31' | |||||
| AT3G58580 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 51 | 21 | 39 | 72 | 70.83% | 64.86% | 72 | 111 | 0.602 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.31' | |||
| AT3G58580 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0992 | 47 | 54 | 34 | 92 | 46.53% | 73.02% | 101 | 126 | 1.426 | 1.25 x 10-4 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.31' | ||
| AT3G58580 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 8.92 x 10-3 | 0.0 | 79 | 10 | 62 | 77 | 88.76% | 55.40% | 89 | 139 | 2.389 | 7.4 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.31' | |
| AT3G58570 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 69 | 39 | 78 | 166 | 63.89% | 68.03% | 108 | 244 | 0.657 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.43 | |||
| AT3G58570 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.277 | 94 | 62 | 101 | 201 | 60.26% | 66.56% | 156 | 302 | 0.334 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' | |||
| AT3G58570 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 12 | 16 | 57.14% | 0 | 28 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' | ||||
| AT3G58570 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' | |||||
| AT3G58570 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.43' |