| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G58780 | SHP1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.0396 | 0.0 | 5 | 0 | 0 | 5 | 100.00% | 100.00% | 5 | 5 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.74' | |
| AT3G58780 | SHP1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 60 | 0 | 0 | 0 | 100.00% | 60 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.74' | |||
| AT3G58780 | SHP1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | no data | 1.0 x 10-7 | 3.558 | 21 | 0 | 0 | 10 | 100.00% | 100.00% | 21 | 10 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.74' | |
| AT3G58780 | SHP1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 6.08 x 10-8 | 3.863 | 19 | 0 | 0 | 12 | 100.00% | 100.00% | 19 | 12 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.74' | |
| AT3G58780 | SHP1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 7.44 x 10-6 | 1.897 | 14 | 0 | 0 | 8 | 100.00% | 100.00% | 14 | 8 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.74' | |
| AT3G58780 | SHP1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.74' | ||||
| AT3G58770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 41 | 10 | 23 | 20 | 80.39% | 46.51% | 51 | 43 | 1.326 | 3.65 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.04 | ||
| AT3G58770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 7 | 2 | 28 | 34 | 77.78% | 54.84% | 9 | 62 | 0.416 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |||
| AT3G58770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | not imprinted | 2.54 x 10-16 | 12.19 | 35 | 0 | 1 | 31 | 100.00% | 96.88% | 35 | 32 | 0.55 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | ||
| AT3G58770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 4 | 1 | 2 | 2 | 80.00% | 50.00% | 5 | 4 | 0.767 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |||
| AT3G58770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |||||
| AT3G58770 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | |||||
| AT3G58770 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.522 | 37 | 6 | 45 | 47 | 86.05% | 51.09% | 43 | 92 | 1.702 | 4.03 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | ||
| AT3G58770 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 5 | 4 | 44.44% | 0 | 9 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | ||||
| AT3G58770 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.219 | 61 | 4 | 40 | 23 | 93.85% | 36.51% | 65 | 63 | 6.036 | 3.51 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | ||
| AT3G58760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.104 | 51 | 15 | 67 | 36 | 77.27% | 34.95% | 66 | 103 | 2.398 | 4.27 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -2.49 | ||
| AT3G58760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.673 | 116 | 16 | 154 | 102 | 87.88% | 39.84% | 132 | 256 | 5.086 | 6.35 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.49' | ||
| AT3G58760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.23 x 10-4 | 1.378 | 29 | 0 | 17 | 23 | 100.00% | 57.50% | 29 | 40 | 3.011 | 4.78 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.49' | |
| AT3G58760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.443 | 432 | 142 | 143 | 225 | 75.26% | 61.14% | 574 | 368 | 1.298 | 4.36 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.49' | ||
| AT3G58760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 0.0 | 6.138 | 302 | 47 | 19 | 158 | 86.53% | 89.27% | 349 | 177 | 0.488 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.49' | ||
| AT3G58760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 3.11 x 10-11 | 2.766 | 105 | 12 | 22 | 80 | 89.74% | 78.43% | 117 | 102 | 0.0 | 0.0383 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.49' | |
| AT3G58760 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.798 | 145 | 26 | 66 | 56 | 84.80% | 45.90% | 171 | 122 | 3.047 | 1.3 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.49' | ||
| AT3G58760 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 0 | 23 | 0 | 40 | 0.00% | 100.00% | 23 | 40 | 62.344 | 5.5 x 10-17 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.49' | ||
| AT3G58760 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.35 x 10-3 | 1.351 | 17 | 134 | 12 | 94 | 11.26% | 88.68% | 151 | 106 | 20.728 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.49' | |
| AT3G58750 | CSY2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | not imprinted | 0.751 | 6 | 0 | 8 | 4 | 100.00% | 33.33% | 6 | 12 | 1.001 | 0.0355 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .52 | |
| AT3G58750 | CSY2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0129 | 0.0 | 32 | 2 | 72 | 84 | 94.12% | 53.85% | 34 | 156 | 2.655 | 1.81 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.52' |
| AT3G58750 | CSY2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 9.23 x 10-5 | 1.429 | 56 | 0 | 18 | 14 | 100.00% | 43.75% | 56 | 32 | 9.448 | 5.62 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.52' |
| AT3G58750 | CSY2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0233 | 0.0 | 274 | 100 | 55 | 135 | 73.26% | 71.05% | 374 | 190 | 0.855 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.52' | |
| AT3G58750 | CSY2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 3.92 x 10-8 | 2.906 | 35 | 25 | 0 | 53 | 58.33% | 100.00% | 60 | 53 | 5.931 | 3.32 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.52' |
| AT3G58750 | CSY2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.877 | 62 | 36 | 28 | 73 | 63.27% | 72.28% | 98 | 101 | 0.29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.52' | ||
| AT3G58750 | CSY2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 8.94 x 10-10 | 1.529 | 357 | 106 | 159 | 430 | 77.11% | 73.01% | 463 | 589 | 0.249 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.52' | |
| AT3G58750 | CSY2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.333 | 92 | 71 | 52 | 123 | 56.44% | 70.29% | 163 | 175 | 0.0 | 0.0143 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.52' | |
| AT3G58750 | CSY2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.202 | 140 | 29 | 47 | 24 | 82.84% | 33.80% | 169 | 71 | 3.905 | 9.46 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.52' | |
| AT3G58740 | CSY1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -4.84 | ||||
| AT3G58740 | CSY1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.84' | ||||
| AT3G58740 | CSY1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.84' | ||||
| AT3G58740 | CSY1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0256 | 0.0 | 1168 | 570 | 526 | 835 | 67.20% | 61.35% | 1738 | 1361 | 1.047 | 3.72 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.84' |
| AT3G58740 | CSY1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.789 | 716 | 248 | 393 | 525 | 74.27% | 57.19% | 964 | 918 | 1.642 | 2.32 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.84' | |
| AT3G58740 | CSY1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0365 | 0.0 | 1112 | 442 | 694 | 934 | 71.56% | 57.37% | 1554 | 1628 | 1.518 | 4.03 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.84' |
| AT3G58740 | CSY1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 9.37 x 10-4 | 1.063 | 1807 | 1014 | 487 | 852 | 64.06% | 63.63% | 2821 | 1339 | 0.966 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.84' | |
| AT3G58740 | CSY1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.5 x 10-9 | 1.352 | 863 | 466 | 137 | 540 | 64.94% | 79.76% | 1329 | 677 | 1.577 | 1.13 x 10-11 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.84' |
| AT3G58740 | CSY1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.36 x 10-4 | 1.071 | 1150 | 1066 | 295 | 1443 | 51.90% | 83.03% | 2216 | 1738 | 3.681 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-4.84' |
| AT3G58730 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 21 | 8 | 20 | 37 | 72.41% | 64.91% | 29 | 57 | 0.815 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .51 | |||
| AT3G58730 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0253 | 2.55 | 0 | 8 | 48 | 112 | 0.00% | 70.00% | 8 | 160 | 3.471 | 4.14 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.51' | |
| AT3G58730 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.153 | 1091 | 544 | 245 | 560 | 66.73% | 69.57% | 1635 | 805 | 0.207 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.51' | |||
| AT3G58730 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.58 | 15 | 2 | 8 | 13 | 88.24% | 61.90% | 17 | 21 | 0.305 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.51' | |||
| AT3G58730 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 0.0 | 2.439 | 974 | 396 | 168 | 883 | 71.09% | 84.02% | 1370 | 1051 | 1.613 | 2.34 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.51' | |
| AT3G58730 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 5.86 x 10-15 | 1.533 | 852 | 285 | 293 | 786 | 74.93% | 72.85% | 1137 | 1079 | 0.339 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.51' | ||
| AT3G58730 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.638 | 34 | 20 | 19 | 32 | 62.96% | 62.75% | 54 | 51 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.51' | |||
| AT3G58730 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0636 | 24 | 43 | 37 | 131 | 35.82% | 77.98% | 67 | 168 | 2.692 | 6.38 x 10-9 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.51' | ||
| AT3G58730 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 4.07 x 10-5 | 2.147 | 106 | 0 | 19 | 12 | 100.00% | 38.71% | 106 | 31 | 21.526 | 3.34 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.51' | |
| AT3G58720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT3G58720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58720 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58720 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58720 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58710 | WRKY69 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .01 | ||||
| AT3G58710 | WRKY69 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||
| AT3G58710 | WRKY69 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | ||||
| AT3G58710 | WRKY69 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | ||||
| AT3G58710 | WRKY69 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | ||||
| AT3G58710 | WRKY69 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | ||||
| AT3G58710 | WRKY69 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | |||
| AT3G58710 | WRKY69 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | ||||
| AT3G58710 | WRKY69 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.01' | ||||
| AT3G58700 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.76 | ||||
| AT3G58700 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |||||
| AT3G58700 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |||||
| AT3G58700 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |||
| AT3G58700 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |||||
| AT3G58700 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |||||
| AT3G58700 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |||||
| AT3G58700 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |||||
| AT3G58700 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.76' | |||||
| AT3G58690 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.782 | 10 | 4 | 24 | 58 | 71.43% | 70.73% | 14 | 82 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .49 | |||
| AT3G58690 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.693 | 40 | 13 | 137 | 219 | 75.47% | 61.52% | 53 | 356 | 0.126 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.49' | |||
| AT3G58690 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.69 x 10-11 | 4.881 | 117 | 0 | 33 | 34 | 100.00% | 50.75% | 117 | 67 | 18.393 | 2.24 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.49' | |
| AT3G58690 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 116 | 43 | 19 | 28 | 72.96% | 59.57% | 159 | 47 | 0.246 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.49' | |||
| AT3G58690 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 167 | 14 | 0 | 0 | 92.27% | 181 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.49' | ||||
| AT3G58690 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | paternally biased | not imprinted | 5.9 x 10-4 | 5.453 | 58 | 38 | 12 | 0 | 60.42% | 0.00% | 96 | 12 | 3.176 | 9.51 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.49' | |
| AT3G58690 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.32 | 111 | 37 | 40 | 77 | 75.00% | 65.81% | 148 | 117 | 0.203 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.49' | |||
| AT3G58690 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 14 | 100.00% | 0 | 14 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.49' | ||||
| AT3G58690 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 21 | 0 | 26 | 0 | 100.00% | 0.00% | 21 | 26 | 37.0 | 1.57 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.49' | ||
| AT3G58680 | MBF1B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.6 x 10-15 | 1.385 | 1125 | 422 | 960 | 2404 | 72.72% | 71.46% | 1547 | 3364 | 0.562 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.3 | |
| AT3G58680 | MBF1B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 1.979 | 1255 | 306 | 1621 | 3757 | 80.40% | 69.86% | 1561 | 5378 | 1.473 | 6.68 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' |
| AT3G58680 | MBF1B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 7.65 x 10-4 | 1.025 | 2110 | 1668 | 1294 | 4757 | 55.85% | 78.62% | 3778 | 6051 | 2.563 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' |
| AT3G58680 | MBF1B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.26 x 10-5 | 1.108 | 2266 | 830 | 602 | 1167 | 73.19% | 65.97% | 3096 | 1769 | 1.179 | 1.19 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' |
| AT3G58680 | MBF1B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.478 | 2840 | 680 | 1344 | 1229 | 80.68% | 47.77% | 3520 | 2573 | 3.888 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | |
| AT3G58680 | MBF1B | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.71 x 10-20 | 1.409 | 3295 | 769 | 980 | 1511 | 81.08% | 60.66% | 4064 | 2491 | 2.371 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' |
| AT3G58680 | MBF1B | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 6.19 x 10-12 | 1.194 | 2577 | 1234 | 1566 | 4062 | 67.62% | 72.17% | 3811 | 5628 | 1.095 | 1.02 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' |
| AT3G58680 | MBF1B | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.122 | 1122 | 1577 | 809 | 4152 | 41.57% | 83.69% | 2699 | 4961 | 6.197 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | |
| AT3G58680 | MBF1B | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.306 | 1573 | 1012 | 990 | 2394 | 60.85% | 70.74% | 2585 | 3384 | 1.335 | 2.53 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.3' | |
| AT3G58676 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT3G58676 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58676 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G58676 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |