| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G59500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.674 | 545 | 189 | 255 | 333 | 74.25% | 56.63% | 734 | 588 | 1.59 | 8.21 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G59500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.02 x 10-8 | 1.33 | 521 | 178 | 326 | 799 | 74.54% | 71.02% | 699 | 1125 | 0.206 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G59500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 8.84 x 10-18 | 2.31 | 325 | 50 | 120 | 284 | 86.67% | 70.30% | 375 | 404 | 1.65 | 9.07 x 10-8 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G59500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.6 x 10-7 | 1.415 | 364 | 268 | 154 | 223 | 57.59% | 59.15% | 632 | 377 | 0.693 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G59490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 4 | 3 | 8 | 19 | 57.14% | 70.37% | 7 | 27 | 0.842 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .34 | |||
| AT3G59490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.374 | 0 | 3 | 18 | 39 | 0.00% | 68.42% | 3 | 57 | 0.0808 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | |||
| AT3G59490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 6 | 100.00% | 0 | 6 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | ||||
| AT3G59490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.517 | 67 | 36 | 14 | 45 | 65.05% | 76.27% | 103 | 59 | 0.342 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | |||
| AT3G59490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 14 | 16 | 0 | 0 | 46.67% | 30 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | ||||
| AT3G59490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 4.22 x 10-7 | 2.846 | 12 | 0 | 0 | 14 | 100.00% | 100.00% | 12 | 14 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | ||
| AT3G59490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.269 | 137 | 34 | 122 | 167 | 80.12% | 57.79% | 171 | 289 | 1.605 | 4.07 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | ||
| AT3G59490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | PEG | not imprinted | 6.75 x 10-10 | 29.39 | 0 | 23 | 18 | 6 | 0.00% | 25.00% | 23 | 24 | 0.0 | 0.0321 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | |
| AT3G59490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.389 | 14 | 9 | 12 | 54 | 60.87% | 81.82% | 23 | 66 | 0.0599 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | |||
| AT3G59480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.124 | 243 | 132 | 354 | 596 | 64.80% | 62.74% | 375 | 950 | 0.718 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.03 | |||
| AT3G59480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.61 x 10-6 | 1.569 | 76 | 80 | 254 | 427 | 48.72% | 62.70% | 156 | 681 | 1.108 | 4.65 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.03' | |
| AT3G59480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.28 x 10-6 | 1.276 | 274 | 148 | 335 | 402 | 64.93% | 54.55% | 422 | 737 | 1.093 | 1.06 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.03' | |
| AT3G59480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0521 | 322 | 150 | 51 | 148 | 68.22% | 74.37% | 472 | 199 | 0.273 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.03' | |||
| AT3G59480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.88 x 10-3 | 1.02 | 457 | 132 | 532 | 848 | 77.59% | 61.45% | 589 | 1380 | 1.606 | 5.96 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.03' | |
| AT3G59480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 5.5 x 10-7 | 1.249 | 424 | 168 | 507 | 1329 | 71.62% | 72.39% | 592 | 1836 | 0.821 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.03' | ||
| AT3G59480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0197 | 0.0 | 262 | 106 | 219 | 506 | 71.20% | 69.79% | 368 | 725 | 0.845 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.03' | ||
| AT3G59480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.16 x 10-3 | 1.035 | 329 | 160 | 369 | 1011 | 67.28% | 73.26% | 489 | 1380 | 0.0 | 0.0211 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.03' | |
| AT3G59480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.03 x 10-8 | 1.249 | 909 | 405 | 373 | 1050 | 69.18% | 73.79% | 1314 | 1423 | 0.0 | 0.0106 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.03' | |
| AT3G59470 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 27 | 5 | 35 | 32 | 84.38% | 47.76% | 32 | 67 | 1.462 | 1.83 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.34 | ||
| AT3G59470 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 21 | 6 | 32 | 41 | 77.78% | 56.16% | 27 | 73 | 0.123 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | |||
| AT3G59470 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 17 | 0 | 2 | 0.00% | 100.00% | 17 | 2 | 2.304 | 8.58 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | ||
| AT3G59470 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.298 | 19 | 5 | 9 | 23 | 79.17% | 71.88% | 24 | 32 | 0.972 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | |||
| AT3G59470 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 24 | 0 | 1 | 0 | 100.00% | 0.00% | 24 | 1 | 0.0557 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | |||
| AT3G59470 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.917 | 28 | 74 | 4 | 57 | 27.45% | 93.44% | 102 | 61 | 9.229 | 7.16 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | ||
| AT3G59470 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.966 | 67 | 43 | 34 | 79 | 60.91% | 69.91% | 110 | 113 | 0.292 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | |||
| AT3G59470 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.2 x 10-5 | 1.43 | 84 | 50 | 11 | 98 | 62.69% | 89.91% | 134 | 109 | 2.027 | 1.61 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | |
| AT3G59470 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 3.18 x 10-9 | 3.451 | 62 | 0 | 31 | 42 | 100.00% | 57.53% | 62 | 73 | 7.52 | 2.31 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.34' | |
| AT3G59460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.1 | |||||
| AT3G59460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT3G59460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT3G59460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT3G59460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT3G59460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT3G59460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT3G59460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT3G59460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.1' | |||||
| AT3G59455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT3G59455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT3G59455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59455 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59455 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59455 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59455 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT3G59450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59450 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59450 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59450 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.06 | |||||
| AT3G59440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 1 | 4 | 80.00% | 0 | 5 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | ||||
| AT3G59440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | |||||
| AT3G59440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 3 | 0 | 0 | 0.00% | 3 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | ||||
| AT3G59440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | |||||
| AT3G59440 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 17 | 0 | 0 | 0 | 100.00% | 17 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | ||||
| AT3G59440 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | |||||
| AT3G59440 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | |||||
| AT3G59440 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.06' | |||||
| AT3G59430 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 50 | 15 | 50 | 56 | 76.92% | 52.83% | 65 | 106 | 1.153 | 6.71 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.12 | ||
| AT3G59430 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0195 | 0.0 | 87 | 11 | 69 | 80 | 88.78% | 53.69% | 98 | 149 | 2.67 | 1.99 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT3G59430 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.42 x 10-4 | 1.173 | 132 | 31 | 12 | 37 | 80.98% | 75.51% | 163 | 49 | 0.489 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||
| AT3G59430 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.977 | 167 | 83 | 49 | 90 | 66.80% | 64.75% | 250 | 139 | 0.956 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||
| AT3G59430 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.302 | 6 | 58 | 0 | 60 | 9.38% | 100.00% | 64 | 60 | 66.661 | 5.52 x 10-28 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||
| AT3G59430 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 5.89 x 10-3 | 0.0 | 29 | 8 | 11 | 44 | 78.38% | 80.00% | 37 | 55 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||
| AT3G59430 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 7 | 1 | 5 | 1 | 87.50% | 16.67% | 8 | 6 | 0.0618 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||
| AT3G59430 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 1.0 | 28 | 0 | 14 | 0 | 100.00% | 0.00% | 28 | 14 | 26.564 | 6.59 x 10-11 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||
| AT3G59430 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 25 | 0 | 0 | 0 | 100.00% | 25 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT3G59420 | CR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.852 | 29 | 10 | 12 | 23 | 74.36% | 65.71% | 39 | 35 | 0.647 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.65 | ||
| AT3G59420 | CR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.782 | 13 | 12 | 28 | 74 | 52.00% | 72.55% | 25 | 102 | 0.112 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | ||
| AT3G59420 | CR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.22 x 10-6 | 2.188 | 38 | 0 | 11 | 20 | 100.00% | 64.52% | 38 | 31 | 2.648 | 8.5 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' |
| AT3G59420 | CR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 1.0 | 79 | 26 | 17 | 20 | 75.24% | 54.05% | 105 | 37 | 0.0715 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | ||
| AT3G59420 | CR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 39 | 13 | 0 | 0 | 75.00% | 52 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | |||
| AT3G59420 | CR4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 20 | 15 | 0 | 0 | 57.14% | 35 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | |||
| AT3G59420 | CR4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 5.75 x 10-4 | 1.191 | 88 | 38 | 26 | 119 | 69.84% | 82.07% | 126 | 145 | 0.0535 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | |
| AT3G59420 | CR4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 2.05 x 10-26 | 36.424 | 50 | 0 | 0 | 43 | 100.00% | 100.00% | 50 | 43 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | |
| AT3G59420 | CR4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.236 | 15 | 0 | 34 | 12 | 100.00% | 26.09% | 15 | 46 | 5.794 | 3.75 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.65' | |
| AT3G59415 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT3G59415 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59415 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59415 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59415 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59415 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59415 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59415 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59415 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G59410 | GCN2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.313 | 7 | 5 | 9 | 8 | 58.33% | 47.06% | 12 | 17 | 0.893 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .48 | ||
| AT3G59410 | GCN2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0198 | 1.016 | 27 | 35 | 39 | 83 | 43.55% | 68.03% | 62 | 122 | 1.15 | 6.96 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.48' |
| AT3G59410 | GCN2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 9.82 x 10-3 | 0.0 | 2 | 0 | 0 | 16 | 100.00% | 100.00% | 2 | 16 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.48' | |
| AT3G59410 | GCN2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.73 | 72 | 29 | 26 | 54 | 71.29% | 67.50% | 101 | 80 | 0.863 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.48' | ||
| AT3G59410 | GCN2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.172 | 57 | 41 | 21 | 36 | 58.16% | 63.16% | 98 | 57 | 0.71 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.48' | ||
| AT3G59410 | GCN2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0311 | 0.0 | 27 | 44 | 10 | 20 | 38.03% | 66.67% | 71 | 30 | 0.0 | 0.0158 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.48' |