| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G60620 | CDS5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 7.37 x 10-3 | 1.048 | 63 | 11 | 7 | 22 | 85.14% | 75.86% | 74 | 29 | 0.489 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.24' | |
| AT3G60620 | CDS5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.01 | 0.0 | 33 | 25 | 0 | 12 | 56.90% | 100.00% | 58 | 12 | 1.415 | 4.83 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.24' |
| AT3G60620 | CDS5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.29 | 37 | 19 | 18 | 57 | 66.07% | 76.00% | 56 | 75 | 0.311 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.24' | ||
| AT3G60620 | CDS5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.476 | 68 | 34 | 35 | 95 | 66.67% | 73.08% | 102 | 130 | 0.483 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.24' | ||
| AT3G60620 | CDS5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.885 | 58 | 45 | 49 | 166 | 56.31% | 77.21% | 103 | 215 | 1.3 | 3.96 x 10-4 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.24' | |
| AT3G60620 | CDS5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 6.64 x 10-22 | 5.769 | 69 | 65 | 170 | 59 | 51.49% | 25.76% | 134 | 229 | 1.625 | 2.09 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.24' |
| AT3G60600 | VAP27-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 7 | 2 | 7 | 7 | 77.78% | 50.00% | 9 | 14 | 0.39 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.16 | ||
| AT3G60600 | VAP27-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0633 | 6 | 0 | 31 | 62 | 100.00% | 66.67% | 6 | 93 | 0.279 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | ||
| AT3G60600 | VAP27-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 6.28 x 10-9 | 4.198 | 159 | 2 | 13 | 20 | 98.76% | 60.61% | 161 | 33 | 7.094 | 2.28 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' |
| AT3G60600 | VAP27-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0119 | 1.024 | 497 | 172 | 115 | 242 | 74.29% | 67.79% | 669 | 357 | 0.0891 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |
| AT3G60600 | VAP27-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | not imprinted | 1.3 x 10-29 | 45.742 | 60 | 0 | 0 | 45 | 100.00% | 100.00% | 60 | 45 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |
| AT3G60600 | VAP27-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.302 | 35 | 37 | 18 | 51 | 48.61% | 73.91% | 72 | 69 | 1.114 | 5.54 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |
| AT3G60600 | VAP27-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.21 | 78 | 15 | 31 | 41 | 83.87% | 56.94% | 93 | 72 | 1.435 | 7.29 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |
| AT3G60600 | VAP27-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 103 | 50 | 0 | 0 | 67.32% | 153 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |||
| AT3G60600 | VAP27-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0092 | 0.0 | 35 | 0 | 61 | 25 | 100.00% | 29.07% | 35 | 86 | 14.015 | 3.23 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' |
| AT3G60590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.551 | 8 | 2 | 26 | 49 | 80.00% | 65.33% | 10 | 75 | 0.678 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .21 | |||
| AT3G60590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0444 | 0.0 | 31 | 7 | 44 | 100 | 81.58% | 69.44% | 38 | 144 | 0.262 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | ||
| AT3G60590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 0.0 | 48.252 | 275 | 0 | 11 | 56 | 100.00% | 83.58% | 275 | 67 | 7.447 | 2.04 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | |
| AT3G60590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 43 | 16 | 10 | 14 | 72.88% | 58.33% | 59 | 24 | 0.41 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | |||
| AT3G60590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 0 | 10 | 0 | 0 | 0.00% | 10 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | ||||
| AT3G60590 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | paternally biased | not imprinted | 5.92 x 10-3 | 2.937 | 21 | 11 | 11 | 0 | 65.62% | 0.00% | 32 | 11 | 2.676 | 3.76 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | |
| AT3G60590 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.218 | 29 | 10 | 40 | 102 | 74.36% | 71.83% | 39 | 142 | 0.995 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | |||
| AT3G60590 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.15 x 10-27 | 16.713 | 81 | 0 | 17 | 90 | 100.00% | 84.11% | 81 | 107 | 2.385 | 8.78 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | |
| AT3G60590 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.47 x 10-8 | 4.136 | 112 | 0 | 19 | 20 | 100.00% | 51.28% | 112 | 39 | 14.929 | 2.12 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.21' | |
| AT3G60580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 2 | 1 | 2 | 7 | 66.67% | 77.78% | 3 | 9 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .54 | |||
| AT3G60580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 0.26 | 2 | 3 | 8 | 10 | 40.00% | 55.56% | 5 | 18 | 0.776 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | |||
| AT3G60580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 5 | 100.00% | 0 | 5 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | ||||
| AT3G60580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | |||||
| AT3G60580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | |||||
| AT3G60580 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | |||||
| AT3G60580 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.408 | 25 | 11 | 3 | 12 | 69.44% | 80.00% | 36 | 15 | 0.692 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | |||
| AT3G60580 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 2.73 x 10-14 | 12.198 | 45 | 0 | 0 | 16 | 100.00% | 100.00% | 45 | 16 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | ||
| AT3G60580 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.33 x 10-3 | 0.0 | 26 | 0 | 33 | 23 | 100.00% | 41.07% | 26 | 56 | 5.737 | 9.55 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.54' | |
| AT3G60570 | EXPB5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.62 | ||||
| AT3G60570 | EXPB5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.62' | ||||
| AT3G60570 | EXPB5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.62' | ||||
| AT3G60570 | EXPB5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.62' | ||||
| AT3G60570 | EXPB5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.62' | ||||
| AT3G60570 | EXPB5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.62' | ||||
| AT3G60570 | EXPB5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.62' | ||||
| AT3G60570 | EXPB5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.62' | ||||
| AT3G60570 | EXPB5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.62' | ||||
| AT3G60565 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.12 | |||||
| AT3G60565 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||||
| AT3G60565 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||||
| AT3G60565 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||||
| AT3G60565 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||||
| AT3G60565 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||||
| AT3G60565 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||||
| AT3G60565 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||||
| AT3G60565 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||||
| AT3G60560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .04 | |||||
| AT3G60560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |||||
| AT3G60560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |||||
| AT3G60560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |||||
| AT3G60560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |||||
| AT3G60560 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |||||
| AT3G60560 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |||||
| AT3G60560 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |||||
| AT3G60560 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.04' | |||||
| AT3G60550 | CYCP3;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.12 | |||
| AT3G60550 | CYCP3;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 0.0142 | 0.0 | 12 | 0 | 1 | 5 | 100.00% | 83.33% | 12 | 6 | 0.468 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT3G60550 | CYCP3;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 5 | 31 | 86.11% | 0 | 36 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||
| AT3G60550 | CYCP3;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | MEG | MEG | 5.32 x 10-8 | 4.072 | 26 | 1 | 0 | 14 | 96.30% | 100.00% | 27 | 14 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT3G60550 | CYCP3;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | MEG | 1.3 x 10-20 | 30.189 | 99 | 0 | 0 | 18 | 100.00% | 100.00% | 99 | 18 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT3G60550 | CYCP3;2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | MEG | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | ||||
| AT3G60550 | CYCP3;2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 2.99 x 10-3 | 0.0 | 9 | 0 | 1 | 9 | 100.00% | 90.00% | 9 | 10 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT3G60550 | CYCP3;2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 8 | 100.00% | 0 | 8 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |||
| AT3G60550 | CYCP3;2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | no data | 1.61 x 10-7 | 3.083 | 14 | 0 | 0 | 13 | 100.00% | 100.00% | 14 | 13 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.12' | |
| AT3G60540 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 1 | 3 | 75.00% | 0 | 4 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .19 | ||||
| AT3G60540 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 7 | 100.00% | 0 | 7 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | ||||
| AT3G60540 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||||
| AT3G60540 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||||
| AT3G60540 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||||
| AT3G60540 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||||
| AT3G60540 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.391 | 1 | 1 | 0 | 7 | 50.00% | 100.00% | 2 | 7 | 0.373 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||
| AT3G60540 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||||
| AT3G60540 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||||
| AT3G60530 | GATA4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.529 | 332 | 182 | 472 | 1149 | 64.59% | 70.88% | 514 | 1621 | 1.001 | 0.0243 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.07 | |
| AT3G60530 | GATA4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.487 | 921 | 690 | 959 | 2708 | 57.17% | 73.85% | 1611 | 3667 | 1.781 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.07' | |
| AT3G60530 | GATA4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.01 x 10-3 | 1.04 | 344 | 112 | 511 | 953 | 75.44% | 65.10% | 456 | 1464 | 1.196 | 6.62 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.07' |
| AT3G60530 | GATA4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.63 | 144 | 76 | 61 | 105 | 65.45% | 63.25% | 220 | 166 | 0.899 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.07' | ||
| AT3G60530 | GATA4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.05 x 10-3 | 1.233 | 117 | 56 | 51 | 38 | 67.63% | 42.70% | 173 | 89 | 1.346 | 2.2 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.07' |
| AT3G60530 | GATA4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.339 | 139 | 56 | 60 | 122 | 71.28% | 67.03% | 195 | 182 | 0.461 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.07' | ||
| AT3G60530 | GATA4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.113 | 706 | 353 | 836 | 1937 | 66.67% | 69.85% | 1059 | 2773 | 0.129 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.07' | ||
| AT3G60530 | GATA4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.6 x 10-18 | 1.529 | 823 | 251 | 1078 | 2488 | 76.63% | 69.77% | 1074 | 3566 | 1.149 | 2.37 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.07' |
| AT3G60530 | GATA4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.274 | 1132 | 149 | 532 | 242 | 88.37% | 31.27% | 1281 | 774 | 12.098 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.07' | |
| AT3G60520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.257 | 7 | 2 | 4 | 18 | 77.78% | 81.82% | 9 | 22 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.4 | |||
| AT3G60520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0484 | 1.293 | 3 | 8 | 24 | 34 | 27.27% | 58.62% | 11 | 58 | 0.174 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.4' | ||
| AT3G60520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | not imprinted | 9.13 x 10-6 | 3.117 | 46 | 0 | 0 | 4 | 100.00% | 100.00% | 46 | 4 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.4' | ||
| AT3G60520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.4' | |||||
| AT3G60520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.4' | |||||
| AT3G60520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.4' | |||||
| AT3G60520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.899 | 82 | 32 | 65 | 89 | 71.93% | 57.79% | 114 | 154 | 0.0511 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.4' | |||
| AT3G60520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 82 | 44 | 0 | 0 | 65.08% | 126 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.4' | ||||
| AT3G60520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.29 x 10-6 | 2.598 | 49 | 0 | 8 | 15 | 100.00% | 65.22% | 49 | 23 | 2.955 | 5.67 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.4' | |
| AT3G60510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.48 | |||||
| AT3G60510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.48' | |||||
| AT3G60510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.48' | |||||
| AT3G60510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.48' |