| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G61530 | PANB2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 5.54 x 10-10 | 3.629 | 50 | 0 | 32 | 55 | 100.00% | 63.22% | 50 | 87 | 4.914 | 9.45 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.01' |
| AT3G61530 | PANB2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.01' | ||||
| AT3G61530 | PANB2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.01' | ||||
| AT3G61530 | PANB2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.01' | ||||
| AT3G61530 | PANB2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 149 | 50 | 87 | 120 | 74.87% | 57.97% | 199 | 207 | 1.193 | 1.24 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.01' | |
| AT3G61530 | PANB2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.16 x 10-5 | 1.607 | 45 | 0 | 60 | 48 | 100.00% | 44.44% | 45 | 108 | 10.041 | 2.8 x 10-12 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.01' |
| AT3G61530 | PANB2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 9.23 x 10-9 | 3.878 | 167 | 0 | 43 | 25 | 100.00% | 36.76% | 167 | 68 | 45.896 | 3.1 x 10-29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.01' |
| AT3G61520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 1 | 0 | 3 | 0 | 100.00% | 0.00% | 1 | 3 | 0.416 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.96 | |||
| AT3G61520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 7 | 0 | 6 | 0 | 100.00% | 0.00% | 7 | 6 | 2.846 | 1.97 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.96' | ||
| AT3G61520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | no data | 1.0 | 41 | 0 | 6 | 0 | 100.00% | 0.00% | 41 | 6 | 16.67 | 2.16 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.96' | ||
| AT3G61520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.96' | |||||
| AT3G61520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.96' | |||||
| AT3G61520 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.96' | |||||
| AT3G61520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 1.0 | 25 | 0 | 14 | 0 | 100.00% | 0.00% | 25 | 14 | 23.718 | 4.33 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.96' | ||
| AT3G61520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 8 | 100.00% | 0 | 8 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.96' | ||||
| AT3G61520 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 16 | 0 | 0 | 0 | 100.00% | 16 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.96' | ||||
| AT3G61510 | ACS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 1 | 9 | 40 | 0.00% | 81.63% | 1 | 49 | 0.352 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.11 | ||
| AT3G61510 | ACS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 10 | 53 | 84.13% | 0 | 63 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||
| AT3G61510 | ACS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||||
| AT3G61510 | ACS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | |||
| AT3G61510 | ACS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||||
| AT3G61510 | ACS1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||||
| AT3G61510 | ACS1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 1.0 | 2 | 1 | 40 | 105 | 66.67% | 72.41% | 3 | 145 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||
| AT3G61510 | ACS1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||||
| AT3G61510 | ACS1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.11' | ||||
| AT3G61500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT3G61500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G61500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G61500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.89 | 55 | 33 | 8 | 15 | 62.50% | 65.22% | 88 | 23 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT3G61500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 6.52 x 10-25 | 10.845 | 132 | 95 | 0 | 156 | 58.15% | 100.00% | 227 | 156 | 22.469 | 7.38 x 10-26 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G61500 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 0.0041 | 0.0 | 4 | 0 | 0 | 8 | 100.00% | 100.00% | 4 | 8 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G61500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.743 | 17 | 7 | 369 | 830 | 70.83% | 69.22% | 24 | 1199 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT3G61500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | PEG | not imprinted | 3.41 x 10-6 | 2.183 | 24 | 26 | 195 | 183 | 48.00% | 48.41% | 50 | 378 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G61500 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.21 x 10-3 | 0.0 | 23 | 0 | 14 | 16 | 100.00% | 53.33% | 23 | 30 | 2.594 | 1.03 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G61490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.677 | 68 | 10 | 37 | 31 | 87.18% | 45.59% | 78 | 68 | 2.635 | 7.89 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.5 | ||
| AT3G61490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.1 x 10-15 | 5.49 | 140 | 1 | 58 | 73 | 99.29% | 55.73% | 141 | 131 | 13.864 | 4.85 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.5' | |
| AT3G61490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 9.58 x 10-5 | 1.33 | 48 | 0 | 30 | 22 | 100.00% | 42.31% | 48 | 52 | 9.895 | 2.99 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.5' | |
| AT3G61490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.44 x 10-3 | 1.102 | 65 | 12 | 9 | 28 | 84.42% | 75.68% | 77 | 37 | 0.542 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.5' | ||
| AT3G61490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 4.63 x 10-4 | 1.285 | 90 | 54 | 53 | 48 | 62.50% | 47.52% | 144 | 101 | 0.0 | 0.0371 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.5' | |
| AT3G61490 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.125 | 21 | 0 | 29 | 11 | 100.00% | 27.50% | 21 | 40 | 7.296 | 3.52 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.5' | ||
| AT3G61490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 6.9 x 10-13 | 2.826 | 159 | 10 | 61 | 111 | 94.08% | 64.53% | 169 | 172 | 3.414 | 3.25 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.5' | |
| AT3G61490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 7.73 x 10-3 | 0.0 | 25 | 0 | 15 | 13 | 100.00% | 46.43% | 25 | 28 | 3.631 | 1.41 x 10-5 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.5' | |
| AT3G61490 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.06 x 10-9 | 3.94 | 102 | 0 | 36 | 34 | 100.00% | 48.57% | 102 | 70 | 17.668 | 1.55 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.5' | |
| AT3G61480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.668 | 72 | 13 | 60 | 59 | 84.71% | 49.58% | 85 | 119 | 2.201 | 1.01 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .34 | ||
| AT3G61480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.288 | 87 | 38 | 102 | 127 | 69.60% | 55.46% | 125 | 229 | 0.0 | 0.0297 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | ||
| AT3G61480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.22 x 10-22 | 11.124 | 89 | 0 | 30 | 87 | 100.00% | 74.36% | 89 | 117 | 5.291 | 1.88 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | |
| AT3G61480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.822 | 34 | 5 | 12 | 11 | 87.18% | 47.83% | 39 | 23 | 1.349 | 5.92 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | ||
| AT3G61480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | not imprinted | 1.0 | 18 | 0 | 0 | 0 | 100.00% | 18 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | ||||
| AT3G61480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 5.3 x 10-11 | 5.28 | 65 | 0 | 12 | 29 | 100.00% | 70.73% | 65 | 41 | 3.616 | 8.83 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | |
| AT3G61480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.09 x 10-3 | 1.067 | 320 | 52 | 214 | 239 | 86.02% | 52.76% | 372 | 453 | 3.423 | 2.14 x 10-24 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | |
| AT3G61480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 36 | 60 | 10 | 72 | 37.50% | 87.80% | 96 | 82 | 4.156 | 1.16 x 10-11 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | ||
| AT3G61480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0176 | 0.0 | 153 | 29 | 157 | 63 | 84.07% | 28.64% | 182 | 220 | 6.623 | 1.4 x 10-29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.34' | |
| AT3G61470 | LHCA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.391 | 1622 | 814 | 1485 | 3179 | 66.58% | 68.16% | 2436 | 4664 | 0.326 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.43 | ||
| AT3G61470 | LHCA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.785 | 1058 | 625 | 1714 | 3952 | 62.86% | 69.75% | 1683 | 5666 | 1.166 | 7.8 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.43' | |
| AT3G61470 | LHCA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 1.636 | 1891 | 1053 | 502 | 2174 | 64.23% | 81.24% | 2944 | 2676 | 2.03 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.43' |
| AT3G61470 | LHCA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.746 | 538 | 195 | 78 | 127 | 73.40% | 61.95% | 733 | 205 | 1.086 | 7.89 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.43' | |
| AT3G61470 | LHCA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 7.49 x 10-6 | 1.858 | 107 | 51 | 56 | 26 | 67.72% | 31.71% | 158 | 82 | 2.045 | 3.26 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.43' |
| AT3G61470 | LHCA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0125 | 1.214 | 11 | 21 | 11 | 16 | 34.38% | 59.26% | 32 | 27 | 0.0998 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.43' | |
| AT3G61470 | LHCA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 5.94 x 10-4 | 1.034 | 3109 | 1523 | 2390 | 5401 | 67.12% | 69.32% | 4632 | 7791 | 0.0 | 0.0298 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.43' |
| AT3G61470 | LHCA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.223 | 618 | 452 | 448 | 1177 | 57.76% | 72.43% | 1070 | 1625 | 1.527 | 2.15 x 10-14 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.43' | |
| AT3G61470 | LHCA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0108 | 0.0 | 1979 | 365 | 5797 | 3707 | 84.43% | 39.00% | 2344 | 9504 | 7.277 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.43' |
| AT3G61460 | BRH1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.64 x 10-6 | 3.083 | 13 | 3 | 2 | 69 | 81.25% | 97.18% | 16 | 71 | 0.0969 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 4.56 | |
| AT3G61460 | BRH1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 49.156 | 99 | 0 | 8 | 123 | 100.00% | 93.89% | 99 | 131 | 0.0 | 0.0274 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.56' |
| AT3G61460 | BRH1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 36.616 | 101 | 0 | 4 | 59 | 100.00% | 93.65% | 101 | 63 | 0.0 | 0.0285 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.56' |
| AT3G61460 | BRH1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.37 x 10-13 | 6.587 | 50 | 3 | 2 | 36 | 94.34% | 94.74% | 53 | 38 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.56' | |
| AT3G61460 | BRH1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 5.78 x 10-8 | 3.456 | 12 | 0 | 0 | 17 | 100.00% | 100.00% | 12 | 17 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.56' | |
| AT3G61460 | BRH1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.07 x 10-8 | 3.621 | 30 | 0 | 7 | 29 | 100.00% | 80.56% | 30 | 36 | 0.0 | 0.0213 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.56' |
| AT3G61460 | BRH1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 108.686 | 277 | 4 | 10 | 302 | 98.58% | 96.79% | 281 | 312 | 0.32 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.56' | |
| AT3G61460 | BRH1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 177.545 | 107 | 0 | 6 | 336 | 100.00% | 98.25% | 107 | 342 | 0.417 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.56' | |
| AT3G61460 | BRH1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 9.0 x 10-30 | 17.245 | 315 | 0 | 68 | 79 | 100.00% | 53.74% | 315 | 147 | 51.109 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '4.56' |
| AT3G61450 | SYP73 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.24 | 2 | 0 | 6 | 28 | 100.00% | 82.35% | 2 | 34 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.93 | ||
| AT3G61450 | SYP73 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 0.13 | 6 | 0 | 13 | 23 | 100.00% | 63.89% | 6 | 36 | 0.254 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.93' | ||
| AT3G61450 | SYP73 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 1 | 64 | 98.46% | 0 | 65 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.93' | |||
| AT3G61450 | SYP73 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 2 | 1 | 1 | 0 | 66.67% | 0.00% | 3 | 1 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.93' | ||
| AT3G61450 | SYP73 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.93' | ||||
| AT3G61450 | SYP73 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.93' | ||||
| AT3G61450 | SYP73 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 6 | 7 | 14 | 56 | 46.15% | 80.00% | 13 | 70 | 0.0 | 0.0417 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.93' | |
| AT3G61450 | SYP73 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 7 | 100.00% | 0 | 7 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.93' | |||
| AT3G61450 | SYP73 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | not imprinted | 1.6 x 10-8 | 4.066 | 20 | 0 | 0 | 12 | 100.00% | 100.00% | 20 | 12 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.93' | |
| AT3G61440 | CYSC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.41 x 10-9 | 1.294 | 792 | 355 | 503 | 1463 | 69.05% | 74.42% | 1147 | 1966 | 1.04 | 0.0048 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.23 |
| AT3G61440 | CYSC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0 | 2.269 | 1429 | 397 | 733 | 2245 | 78.26% | 75.39% | 1826 | 2978 | 0.0512 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | |
| AT3G61440 | CYSC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.94 x 10-26 | 2.175 | 1114 | 350 | 117 | 442 | 76.09% | 79.07% | 1464 | 559 | 0.195 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | |
| AT3G61440 | CYSC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 7.37 x 10-26 | 1.548 | 3187 | 1148 | 509 | 1345 | 73.52% | 72.55% | 4335 | 1854 | 0.678 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | |
| AT3G61440 | CYSC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.72 x 10-3 | 1.015 | 2090 | 747 | 579 | 1012 | 73.67% | 63.61% | 2837 | 1591 | 1.33 | 1.22 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' |
| AT3G61440 | CYSC1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.62 x 10-3 | 1.051 | 610 | 254 | 115 | 289 | 70.60% | 71.53% | 864 | 404 | 0.902 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | |
| AT3G61440 | CYSC1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 2.228 | 1266 | 312 | 538 | 1476 | 80.23% | 73.29% | 1578 | 2014 | 1.184 | 5.3 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' |
| AT3G61440 | CYSC1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0032 | 1.081 | 124 | 82 | 323 | 521 | 60.19% | 61.73% | 206 | 844 | 0.788 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' | |
| AT3G61440 | CYSC1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.58 x 10-11 | 1.522 | 1471 | 230 | 248 | 320 | 86.48% | 56.34% | 1701 | 568 | 3.656 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.23' |
| AT3G61430 | PIP1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | not imprinted | 0.785 | 5 | 1 | 1 | 4 | 83.33% | 80.00% | 6 | 5 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.29 | ||
| AT3G61430 | PIP1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.16 x 10-3 | 0.0 | 13 | 0 | 3 | 11 | 100.00% | 78.57% | 13 | 14 | 0.341 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.29' | |
| AT3G61430 | PIP1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.15 x 10-23 | 40.32 | 119 | 0 | 0 | 20 | 100.00% | 100.00% | 119 | 20 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.29' | |
| AT3G61430 | PIP1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.396 | 13 | 3 | 1 | 6 | 81.25% | 85.71% | 16 | 7 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.29' | ||
| AT3G61430 | PIP1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 5.7 x 10-10 | 4.305 | 29 | 12 | 0 | 53 | 70.73% | 100.00% | 41 | 53 | 2.949 | 3.3 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.29' |
| AT3G61430 | PIP1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0 | 101.876 | 59 | 0 | 1 | 151 | 100.00% | 99.34% | 59 | 152 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.29' | |
| AT3G61430 | PIP1A | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.29' | |||
| AT3G61430 | PIP1A | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.29' | ||||
| AT3G61430 | PIP1A | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.29' | ||||
| AT3G61420 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0894 | 20 | 6 | 29 | 96 | 76.92% | 76.80% | 26 | 125 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.04 | |||
| AT3G61420 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.275 | 40 | 28 | 27 | 121 | 58.82% | 81.76% | 68 | 148 | 1.285 | 0.0022 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' | ||
| AT3G61420 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 6.45 x 10-22 | 11.579 | 97 | 0 | 25 | 72 | 100.00% | 74.23% | 97 | 97 | 5.584 | 2.53 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.04' |