| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G63530 | BB | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | PEG | not imprinted | 8.81 x 10-6 | 18.208 | 0 | 6 | 68 | 13 | 0.00% | 16.05% | 6 | 81 | 0.632 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G63520 | CCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | maternally biased | not imprinted | 4.29 x 10-13 | 2.688 | 123 | 10 | 142 | 286 | 92.48% | 66.82% | 133 | 428 | 2.65 | 2.95 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .15 |
| AT3G63520 | CCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.859 | 131 | 53 | 261 | 448 | 71.20% | 63.19% | 184 | 709 | 0.0939 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | ||
| AT3G63520 | CCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0651 | 1469 | 653 | 741 | 1488 | 69.23% | 66.76% | 2122 | 2229 | 0.11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | ||
| AT3G63520 | CCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.67 x 10-3 | 1.04 | 1305 | 585 | 311 | 730 | 69.05% | 70.12% | 1890 | 1041 | 0.798 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |
| AT3G63520 | CCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0575 | 454 | 194 | 211 | 282 | 70.06% | 57.20% | 648 | 493 | 1.239 | 1.81 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |
| AT3G63520 | CCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.16 | 171 | 33 | 193 | 106 | 83.82% | 35.45% | 204 | 299 | 5.142 | 2.83 x 10-27 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |
| AT3G63520 | CCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.36 x 10-4 | 1.063 | 2017 | 856 | 1283 | 2681 | 70.21% | 67.63% | 2873 | 3964 | 0.0598 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' | |
| AT3G63520 | CCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.04 x 10-12 | 1.299 | 1172 | 619 | 577 | 1915 | 65.44% | 76.85% | 1791 | 2492 | 1.449 | 1.5 x 10-15 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' |
| AT3G63520 | CCD1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.9 x 10-6 | 1.118 | 2530 | 704 | 1337 | 1131 | 78.23% | 45.83% | 3234 | 2468 | 3.611 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.15' |
| AT3G63510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.306 | 18 | 10 | 12 | 9 | 64.29% | 42.86% | 28 | 21 | 0.293 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.35 | |||
| AT3G63510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.182 | 8 | 1 | 3 | 10 | 88.89% | 76.92% | 9 | 13 | 0.753 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' | |||
| AT3G63510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 12 | 8 | 40.00% | 0 | 20 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' | ||||
| AT3G63510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.222 | 7 | 9 | 6 | 9 | 43.75% | 60.00% | 16 | 15 | 0.725 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' | |||
| AT3G63510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.27 x 10-3 | 0.0 | 13 | 13 | 0 | 27 | 50.00% | 100.00% | 26 | 27 | 3.317 | 2.49 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' | |
| AT3G63510 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 1.79 x 10-6 | 2.44 | 16 | 0 | 0 | 9 | 100.00% | 100.00% | 16 | 9 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' | ||
| AT3G63510 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' | |||||
| AT3G63510 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' | |||||
| AT3G63510 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.35' | |||||
| AT3G63500 | TTA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0123 | 1.001 | 252 | 70 | 230 | 392 | 78.26% | 63.02% | 322 | 622 | 1.379 | 8.62 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.37 |
| AT3G63500 | TTA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.85 x 10-3 | 1.021 | 445 | 178 | 253 | 570 | 71.43% | 69.26% | 623 | 823 | 0.525 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | |
| AT3G63500 | TTA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.289 | 247 | 76 | 83 | 127 | 76.47% | 60.48% | 323 | 210 | 1.248 | 1.8 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | |
| AT3G63500 | TTA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.13 | 431 | 160 | 94 | 190 | 72.93% | 66.90% | 591 | 284 | 0.179 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | ||
| AT3G63500 | TTA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.143 | 93 | 125 | 31 | 240 | 42.66% | 88.56% | 218 | 271 | 5.49 | 5.58 x 10-27 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | |
| AT3G63500 | TTA2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 7.7 x 10-4 | 1.095 | 181 | 108 | 98 | 405 | 62.63% | 80.52% | 289 | 503 | 1.56 | 1.75 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' |
| AT3G63500 | TTA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.94 x 10-6 | 1.18 | 752 | 279 | 592 | 1310 | 72.94% | 68.87% | 1031 | 1902 | 0.0548 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' | |
| AT3G63500 | TTA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.91 x 10-3 | 1.015 | 210 | 30 | 269 | 270 | 87.50% | 50.09% | 240 | 539 | 4.028 | 2.37 x 10-24 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' |
| AT3G63500 | TTA2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0263 | 0.0 | 556 | 111 | 512 | 306 | 83.36% | 37.41% | 667 | 818 | 5.936 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.37' |
| AT3G63490 | EMB3126 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.57 x 10-3 | 1.127 | 229 | 164 | 170 | 293 | 58.27% | 63.28% | 393 | 463 | 0.266 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1 | |
| AT3G63490 | EMB3126 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 9.13 x 10-3 | 0.0 | 413 | 153 | 217 | 454 | 72.97% | 67.66% | 566 | 671 | 0.0936 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1' | |
| AT3G63490 | EMB3126 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.1 | 63 | 35 | 115 | 167 | 64.29% | 59.22% | 98 | 282 | 0.47 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1' | ||
| AT3G63490 | EMB3126 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.708 | 855 | 358 | 172 | 264 | 70.49% | 60.55% | 1213 | 436 | 1.135 | 9.26 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1' | |
| AT3G63490 | EMB3126 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.3 x 10-5 | 1.239 | 245 | 161 | 219 | 321 | 60.34% | 59.44% | 406 | 540 | 0.897 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1' | |
| AT3G63490 | EMB3126 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.94 x 10-10 | 1.799 | 293 | 24 | 239 | 254 | 92.43% | 51.52% | 317 | 493 | 6.37 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1' |
| AT3G63490 | EMB3126 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.103 | 215 | 85 | 201 | 422 | 71.67% | 67.74% | 300 | 623 | 0.412 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1' | ||
| AT3G63490 | EMB3126 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.07 x 10-4 | 1.369 | 64 | 104 | 139 | 399 | 38.10% | 74.16% | 168 | 538 | 2.821 | 2.36 x 10-16 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1' |
| AT3G63490 | EMB3126 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.116 | 330 | 187 | 86 | 146 | 63.83% | 62.93% | 517 | 232 | 0.922 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1' | ||
| AT3G63480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.69 | 14 | 12 | 16 | 32 | 53.85% | 66.67% | 26 | 48 | 0.506 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.36 | |||
| AT3G63480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 40 | 12 | 22 | 28 | 76.92% | 56.00% | 52 | 50 | 0.0744 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.36' | |||
| AT3G63480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 6 | 4 | 40.00% | 0 | 10 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.36' | ||||
| AT3G63480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 141 | 51 | 25 | 35 | 73.44% | 58.33% | 192 | 60 | 0.107 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.36' | |||
| AT3G63480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 6.04 x 10-7 | 1.474 | 180 | 59 | 56 | 195 | 75.31% | 77.69% | 239 | 251 | 0.692 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.36' | ||
| AT3G63480 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.53 x 10-3 | 1.071 | 65 | 10 | 137 | 215 | 86.67% | 61.08% | 75 | 352 | 1.739 | 3.08 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.36' | |
| AT3G63480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.558 | 44 | 25 | 29 | 91 | 63.77% | 75.83% | 69 | 120 | 0.187 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.36' | |||
| AT3G63480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 0.0 | 21.718 | 123 | 0 | 43 | 163 | 100.00% | 79.13% | 123 | 206 | 6.046 | 1.81 x 10-9 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.36' | |
| AT3G63480 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.95 x 10-3 | 0.0 | 229 | 69 | 14 | 40 | 76.85% | 74.07% | 298 | 54 | 0.778 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.36' | ||
| AT3G63470 | scpl40 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.775 | 12 | 5 | 16 | 19 | 70.59% | 54.29% | 17 | 35 | 0.556 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.64 | ||
| AT3G63470 | scpl40 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0775 | 22 | 5 | 8 | 24 | 81.48% | 75.00% | 27 | 32 | 0.883 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | ||
| AT3G63470 | scpl40 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 6 | 4 | 40.00% | 0 | 10 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | |||
| AT3G63470 | scpl40 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | no data | 0.398 | 25 | 16 | 1 | 10 | 60.98% | 90.91% | 41 | 11 | 0.199 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | ||
| AT3G63470 | scpl40 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 26 | 100.00% | 0 | 26 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | |||
| AT3G63470 | scpl40 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 11 | 36 | 76.60% | 0 | 47 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | |||
| AT3G63470 | scpl40 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.166 | 42 | 28 | 50 | 77 | 60.00% | 60.63% | 70 | 127 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | ||
| AT3G63470 | scpl40 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | ||||
| AT3G63470 | scpl40 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 10 | 18 | 64.29% | 0 | 28 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.64' | |||
| AT3G63460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0836 | 379 | 136 | 439 | 794 | 73.59% | 64.40% | 515 | 1233 | 1.128 | 7.55 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.6 | ||
| AT3G63460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.86 x 10-8 | 1.239 | 920 | 293 | 749 | 1472 | 75.85% | 66.28% | 1213 | 2221 | 1.283 | 3.0 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.6' | |
| AT3G63460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 0.0 | 2.154 | 1372 | 266 | 1883 | 3791 | 83.76% | 66.81% | 1638 | 5674 | 2.126 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.6' | |
| AT3G63460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.037 | 0.0 | 777 | 285 | 228 | 438 | 73.16% | 65.77% | 1062 | 666 | 1.056 | 5.53 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.6' | |
| AT3G63460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.168 | 1031 | 242 | 234 | 262 | 80.99% | 52.82% | 1273 | 496 | 2.774 | 2.0 x 10-30 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.6' | ||
| AT3G63460 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 563 | 95 | 285 | 190 | 85.56% | 40.00% | 658 | 475 | 5.957 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.6' | ||
| AT3G63460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.33 x 10-6 | 1.113 | 1846 | 671 | 1582 | 2973 | 73.34% | 65.27% | 2517 | 4555 | 1.261 | 1.63 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.6' | |
| AT3G63460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.93 x 10-3 | 1.015 | 1258 | 465 | 2468 | 4328 | 73.01% | 63.68% | 1723 | 6796 | 1.32 | 7.08 x 10-13 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.6' | |
| AT3G63460 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 0.0 | 2.038 | 1918 | 494 | 4270 | 1852 | 79.52% | 30.25% | 2412 | 6122 | 7.679 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.6' | |
| AT3G63450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.448 | 53 | 10 | 25 | 31 | 84.13% | 55.36% | 63 | 56 | 1.308 | 3.92 x 10-3 | TAIR10 | |||
| AT3G63450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.36 | 48 | 6 | 42 | 38 | 88.89% | 47.50% | 54 | 80 | 2.507 | 2.82 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G63450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.16 x 10-3 | 1.762 | 52 | 0 | 0 | 2 | 100.00% | 100.00% | 52 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G63450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 32 | 15 | 5 | 12 | 68.09% | 70.59% | 47 | 17 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT3G63450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 1.95 x 10-12 | 4.884 | 58 | 54 | 0 | 101 | 51.79% | 100.00% | 112 | 101 | 16.933 | 1.39 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G63450 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0823 | 7 | 37 | 11 | 67 | 15.91% | 85.90% | 44 | 78 | 7.824 | 6.51 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G63450 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 130 | 17 | 202 | 101 | 88.44% | 33.33% | 147 | 303 | 7.308 | 4.5 x 10-29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G63450 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | PEG | not imprinted | 5.58 x 10-17 | 9.796 | 31 | 33 | 96 | 15 | 48.44% | 13.51% | 64 | 111 | 2.161 | 1.94 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G63450 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0158 | 1.004 | 120 | 42 | 35 | 20 | 74.07% | 36.36% | 162 | 55 | 2.049 | 1.79 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G63445 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.171 | 0 | 2 | 7 | 1 | 0.00% | 12.50% | 2 | 8 | 1.0 | TAIR10 | ||||
| AT3G63445 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 0.218 | 5 | 0 | 6 | 10 | 100.00% | 62.50% | 5 | 16 | 0.389 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT3G63445 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 10 | 100.00% | 0 | 10 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT3G63445 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.462 | 7 | 4 | 7 | 5 | 63.64% | 41.67% | 11 | 12 | 0.657 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT3G63445 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0142 | 0.0 | 9 | 29 | 0 | 56 | 23.68% | 100.00% | 38 | 56 | 22.604 | 5.05 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G63445 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 13 | 0 | 0 | 0 | 100.00% | 13 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT3G63445 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.537 | 21 | 8 | 12 | 33 | 72.41% | 73.33% | 29 | 45 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT3G63445 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT3G63445 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 54 | 0 | 8 | 0 | 100.00% | 0.00% | 54 | 8 | 29.275 | 5.08 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT3G63440 | CKX6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 11 | 2 | 6 | 4 | 84.62% | 40.00% | 13 | 10 | 0.0929 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .2 | ||
| AT3G63440 | CKX6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.525 | 3 | 4 | 5 | 10 | 42.86% | 66.67% | 7 | 15 | 0.516 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||
| AT3G63440 | CKX6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||||
| AT3G63440 | CKX6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |||
| AT3G63440 | CKX6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||||
| AT3G63440 | CKX6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||||
| AT3G63440 | CKX6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.503 | 10 | 5 | 10 | 11 | 66.67% | 52.38% | 15 | 21 | 0.68 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||
| AT3G63440 | CKX6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 15 | 100.00% | 0 | 15 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | |||
| AT3G63440 | CKX6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.2' | ||||
| AT3G63430 | TRM5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.531 | 497 | 217 | 428 | 678 | 69.61% | 61.30% | 714 | 1106 | 1.092 | 1.21 x 10-3 | TAIR10 | ||
| AT3G63430 | TRM5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0802 | 1344 | 499 | 730 | 1241 | 72.92% | 62.96% | 1843 | 1971 | 1.305 | 4.36 x 10-10 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G63430 | TRM5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.857 | 1314 | 750 | 524 | 1218 | 63.66% | 69.92% | 2064 | 1742 | 1.095 | 8.64 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G63430 | TRM5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.355 | 1176 | 368 | 303 | 435 | 76.17% | 58.94% | 1544 | 738 | 1.71 | 1.76 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G63430 | TRM5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.389 | 658 | 183 | 274 | 341 | 78.24% | 55.45% | 841 | 615 | 2.093 | 1.7 x 10-19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G63430 | TRM5 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.49 x 10-12 | 1.562 | 521 | 107 | 381 | 682 | 82.96% | 64.16% | 628 | 1063 | 1.95 | 1.86 x 10-16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT3G63430 | TRM5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.621 | 808 | 476 | 417 | 1049 | 62.93% | 71.56% | 1284 | 1466 | 1.181 | 8.15 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT3G63430 | TRM5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.09 x 10-10 | 1.321 | 908 | 541 | 239 | 964 | 62.66% | 80.13% | 1449 | 1203 | 1.876 | 2.81 x 10-22 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT3G63430 | TRM5 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 0.0 | 2.072 | 1408 | 652 | 1576 | 1191 | 68.35% | 43.04% | 2060 | 2767 | 2.416 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |