| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G00370 | ANTR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.724 | 387 | 221 | 106 | 215 | 63.65% | 66.98% | 608 | 321 | 0.585 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.73' | ||
| AT4G00370 | ANTR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 7.51 x 10-3 | 1.015 | 186 | 127 | 68 | 108 | 59.42% | 61.36% | 313 | 176 | 0.806 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.73' | |
| AT4G00370 | ANTR2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0595 | 88 | 65 | 26 | 39 | 57.52% | 60.00% | 153 | 65 | 0.876 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.73' | ||
| AT4G00370 | ANTR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.49 | 421 | 194 | 226 | 367 | 68.46% | 61.89% | 615 | 593 | 0.0 | 0.0462 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.73' | |
| AT4G00370 | ANTR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | paternally biased | not imprinted | 5.89 x 10-5 | 5.013 | 0 | 32 | 14 | 52 | 0.00% | 78.79% | 32 | 66 | 17.291 | 1.62 x 10-14 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.73' |
| AT4G00370 | ANTR2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0449 | 0.0 | 52 | 26 | 13 | 57 | 66.67% | 81.43% | 78 | 70 | 0.0714 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.73' | |
| AT4G00360 | CYP86A2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | MEG | MEG | 0.0 | 198.66 | 609 | 26 | 13 | 1118 | 95.91% | 98.85% | 635 | 1131 | 1.448 | 5.34 x 10-4 | TAIR10 | |
| AT4G00360 | CYP86A2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | MEG | 0.0 | 22104.371 | 7892 | 8 | 8 | 2796 | 99.90% | 99.71% | 7900 | 2804 | 0.0882 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G00360 | CYP86A2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | MEG | 0.0 | 14184.335 | 4232 | 3 | 7 | 1712 | 99.93% | 99.59% | 4235 | 1719 | 0.0 | 0.0121 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT4G00360 | CYP86A2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | MEG | MEG | 0.0 | 2425.714 | 4020 | 13 | 5 | 631 | 99.68% | 99.21% | 4033 | 636 | 0.217 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G00360 | CYP86A2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | MEG | MEG | 0.0 | 19749.802 | 978 | 0 | 0 | 1192 | 100.00% | 100.00% | 978 | 1192 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G00360 | CYP86A2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | MEG | 0.0 | 273.055 | 867 | 1 | 19 | 216 | 99.88% | 91.91% | 868 | 235 | 8.451 | 6.93 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT4G00360 | CYP86A2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | MEG | MEG | 0.0 | 7949.326 | 1904 | 7 | 3 | 2133 | 99.63% | 99.86% | 1911 | 2136 | 0.352 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G00360 | CYP86A2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | MEG | 0.0 | 12476.785 | 735 | 0 | 0 | 1002 | 100.00% | 100.00% | 735 | 1002 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G00360 | CYP86A2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | MEG | 0.0 | 17.009 | 560 | 1 | 591 | 460 | 99.82% | 43.77% | 561 | 1051 | 112.302 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |
| AT4G00355 | ATI2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.57 x 10-7 | 1.303 | 458 | 116 | 518 | 933 | 79.79% | 64.30% | 574 | 1451 | 1.607 | 5.16 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.19 |
| AT4G00355 | ATI2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 6.41 x 10-14 | 1.523 | 599 | 141 | 781 | 1467 | 80.95% | 65.26% | 740 | 2248 | 1.727 | 2.41 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' |
| AT4G00355 | ATI2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0773 | 1146 | 467 | 499 | 934 | 71.05% | 65.18% | 1613 | 1433 | 1.056 | 8.51 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | |
| AT4G00355 | ATI2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.227 | 758 | 248 | 175 | 281 | 75.35% | 61.62% | 1006 | 456 | 1.366 | 1.32 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | |
| AT4G00355 | ATI2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 0.0 | 2.52 | 920 | 401 | 230 | 1307 | 69.64% | 85.04% | 1321 | 1537 | 1.915 | 2.96 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' |
| AT4G00355 | ATI2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 5.11 x 10-3 | 0.0 | 168 | 61 | 71 | 181 | 73.36% | 71.83% | 229 | 252 | 0.869 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | |
| AT4G00355 | ATI2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.348 | 430 | 193 | 352 | 726 | 69.02% | 67.35% | 623 | 1078 | 0.664 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | ||
| AT4G00355 | ATI2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.25 x 10-3 | 1.049 | 224 | 148 | 114 | 185 | 60.22% | 61.87% | 372 | 299 | 0.788 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' | |
| AT4G00355 | ATI2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 1.81 x 10-13 | 2.531 | 471 | 92 | 329 | 62 | 83.66% | 15.86% | 563 | 391 | 16.585 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.19' |
| AT4G00350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 0.653 | 4 | 0 | 1 | 2 | 100.00% | 66.67% | 4 | 3 | 0.619 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.86 | |||
| AT4G00350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | no data | 0.562 | 20 | 10 | 4 | 3 | 66.67% | 42.86% | 30 | 7 | 0.53 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.86' | |||
| AT4G00350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 6 | 0 | 0.00% | 0 | 6 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.86' | ||||
| AT4G00350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.653 | 13 | 28 | 12 | 64 | 31.71% | 84.21% | 41 | 76 | 3.279 | 2.46 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.86' | ||
| AT4G00350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 0 | 34 | 0 | 44 | 0.00% | 100.00% | 34 | 44 | 101.377 | 4.45 x 10-22 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.86' | ||
| AT4G00350 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.097 | 8 | 18 | 0 | 19 | 30.77% | 100.00% | 26 | 19 | 4.948 | 2.86 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.86' | ||
| AT4G00350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 1.0 | 16 | 3 | 1 | 2 | 84.21% | 66.67% | 19 | 3 | 0.65 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.86' | |||
| AT4G00350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 75 | 0 | 0 | 0 | 100.00% | 75 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.86' | ||||
| AT4G00350 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.86' | |||||
| AT4G00342 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT4G00342 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00342 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00342 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00342 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00342 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00342 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00342 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00342 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00340 | RLK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.178 | 19 | 4 | 12 | 31 | 82.61% | 72.09% | 23 | 43 | 0.576 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .19 | ||
| AT4G00340 | RLK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.147 | 64 | 32 | 29 | 95 | 66.67% | 76.61% | 96 | 124 | 0.219 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | ||
| AT4G00340 | RLK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 7.01 x 10-9 | 3.823 | 47 | 0 | 8 | 22 | 100.00% | 73.33% | 47 | 30 | 2.022 | 4.68 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' |
| AT4G00340 | RLK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.374 | 247 | 87 | 48 | 91 | 73.95% | 65.47% | 334 | 139 | 0.19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | ||
| AT4G00340 | RLK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 3.9 x 10-8 | 1.577 | 249 | 73 | 47 | 156 | 77.33% | 76.85% | 322 | 203 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |
| AT4G00340 | RLK4 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0041 | 0.0 | 9 | 14 | 0 | 37 | 39.13% | 100.00% | 23 | 37 | 6.634 | 1.42 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' |
| AT4G00340 | RLK4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.254 | 38 | 39 | 28 | 191 | 49.35% | 87.21% | 77 | 219 | 3.031 | 1.04 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |
| AT4G00340 | RLK4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 46 | 100.00% | 0 | 46 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |||
| AT4G00340 | RLK4 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 3.97 x 10-4 | 1.435 | 32 | 24 | 76 | 68 | 57.14% | 47.22% | 56 | 144 | 0.301 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.19' | |
| AT4G00335 | RHB1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.468 | 26 | 17 | 30 | 48 | 60.47% | 61.54% | 43 | 78 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .07 | ||
| AT4G00335 | RHB1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 1.78 x 10-9 | 3.109 | 44 | 2 | 26 | 85 | 95.65% | 76.58% | 46 | 111 | 1.163 | 0.0136 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' |
| AT4G00335 | RHB1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.137 | 117 | 101 | 17 | 33 | 53.67% | 66.00% | 218 | 50 | 0.149 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT4G00335 | RHB1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT4G00335 | RHB1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT4G00335 | RHB1A | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||||
| AT4G00335 | RHB1A | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.165 | 43 | 10 | 17 | 33 | 81.13% | 66.00% | 53 | 50 | 0.221 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | ||
| AT4G00335 | RHB1A | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 8 | 100.00% | 0 | 8 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |||
| AT4G00335 | RHB1A | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 38 | 0 | 18 | 0 | 100.00% | 0.00% | 38 | 18 | 46.351 | 9.65 x 10-15 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.07' | |
| AT4G00330 | CRCK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 2.93 x 10-19 | 8.251 | 50 | 5 | 5 | 96 | 90.91% | 95.05% | 55 | 101 | 0.51 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 2.56 | |
| AT4G00330 | CRCK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.02 x 10-11 | 2.725 | 144 | 54 | 7 | 83 | 72.73% | 92.22% | 198 | 90 | 1.533 | 3.53 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.56' |
| AT4G00330 | CRCK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0 | 113.278 | 803 | 0 | 15 | 57 | 100.00% | 79.17% | 803 | 72 | 31.379 | 5.77 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.56' |
| AT4G00330 | CRCK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.85 x 10-18 | 3.534 | 200 | 132 | 8 | 186 | 60.24% | 95.88% | 332 | 194 | 6.158 | 6.66 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.56' |
| AT4G00330 | CRCK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0 | 62.149 | 269 | 63 | 0 | 294 | 81.02% | 100.00% | 332 | 294 | 13.635 | 1.98 x 10-18 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.56' |
| AT4G00330 | CRCK2 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 3.0 x 10-30 | 14.69 | 165 | 66 | 0 | 120 | 71.43% | 100.00% | 231 | 120 | 9.401 | 1.87 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.56' |
| AT4G00330 | CRCK2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 4.45 x 10-5 | 1.402 | 206 | 24 | 60 | 83 | 89.57% | 58.04% | 230 | 143 | 2.93 | 2.09 x 10-11 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.56' |
| AT4G00330 | CRCK2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 5.61 x 10-14 | 6.25 | 300 | 0 | 99 | 45 | 100.00% | 31.25% | 300 | 144 | 121.002 | 0.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.56' |
| AT4G00330 | CRCK2 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.98 x 10-7 | 2.114 | 155 | 24 | 260 | 35 | 86.59% | 11.86% | 179 | 295 | 22.042 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '2.56' |
| AT4G00320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -2.71 | |||||
| AT4G00320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.71' | |||||
| AT4G00320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.71' | |||||
| AT4G00320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.71' | |||||
| AT4G00320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.71' | |||||
| AT4G00320 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.71' | |||||
| AT4G00320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.71' | ||||
| AT4G00320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.71' | |||||
| AT4G00320 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-2.71' | |||||
| AT4G00315 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT4G00315 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00315 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00315 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00315 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00315 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00315 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00315 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00315 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G00310 | EDA8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.999 | 24 | 8 | 21 | 23 | 75.00% | 52.27% | 32 | 44 | 0.128 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .27 | ||
| AT4G00310 | EDA8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.642 | 30 | 11 | 22 | 21 | 73.17% | 48.84% | 41 | 43 | 0.0593 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.27' | ||
| AT4G00310 | EDA8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.835 | 54 | 20 | 5 | 8 | 72.97% | 61.54% | 74 | 13 | 0.581 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.27' | ||
| AT4G00310 | EDA8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.731 | 39 | 12 | 14 | 11 | 76.47% | 44.00% | 51 | 25 | 1.013 | 0.0345 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.27' | |
| AT4G00310 | EDA8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | paternally biased | not imprinted | 3.83 x 10-3 | 2.225 | 29 | 5 | 31 | 0 | 85.29% | 0.00% | 34 | 31 | 18.715 | 6.48 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.27' |
| AT4G00310 | EDA8 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.458 | 29 | 9 | 26 | 22 | 76.32% | 45.83% | 38 | 48 | 1.046 | 0.0126 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.27' | |
| AT4G00310 | EDA8 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.859 | 78 | 18 | 59 | 63 | 81.25% | 51.64% | 96 | 122 | 1.717 | 2.1 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.27' | |
| AT4G00310 | EDA8 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0872 | 109 | 97 | 17 | 101 | 52.91% | 85.59% | 206 | 118 | 2.421 | 3.04 x 10-9 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.27' | |
| AT4G00310 | EDA8 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | not imprinted | 1.36 x 10-11 | 4.088 | 96 | 13 | 3 | 36 | 88.07% | 92.31% | 109 | 39 | 0.608 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.27' | |
| AT4G00305 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 1 | 2 | 66.67% | 0 | 3 | 1.0 | TAIR10 | |||||
| AT4G00305 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 0.59 | 1 | 0 | 2 | 6 | 100.00% | 75.00% | 1 | 8 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G00305 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 6 | 0 | 0.00% | 0 | 6 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G00305 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |