| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G02075 | PIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 31 | 100.00% | 0 | 31 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.14' | |||
| AT4G02075 | PIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.743 | 18 | 13 | 12 | 23 | 58.06% | 65.71% | 31 | 35 | 0.852 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.14' | ||
| AT4G02075 | PIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.141 | 8 | 8 | 32 | 54 | 50.00% | 62.79% | 16 | 86 | 0.489 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.14' | ||
| AT4G02075 | PIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 8 | 7 | 0 | 0 | 53.33% | 15 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.14' | |||
| AT4G02075 | PIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.857 | 25 | 22 | 10 | 29 | 53.19% | 74.36% | 47 | 39 | 0.105 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.14' | ||
| AT4G02075 | PIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 0 | 21 | 0 | 16 | 0.00% | 100.00% | 21 | 16 | 22.769 | 2.58 x 10-10 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.14' | |
| AT4G02075 | PIT1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.14' | ||||
| AT4G02070 | MSH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 9.3 x 10-4 | 1.18 | 188 | 105 | 152 | 183 | 64.16% | 54.63% | 293 | 335 | 0.0 | 0.0483 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.16 |
| AT4G02070 | MSH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.239 | 317 | 100 | 392 | 593 | 76.02% | 60.20% | 417 | 985 | 1.474 | 7.26 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |
| AT4G02070 | MSH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 3.2 x 10-11 | 2.053 | 128 | 111 | 165 | 175 | 53.56% | 51.47% | 239 | 340 | 0.753 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |
| AT4G02070 | MSH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.579 | 538 | 203 | 112 | 195 | 72.60% | 63.52% | 741 | 307 | 1.027 | 0.0163 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |
| AT4G02070 | MSH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.31 x 10-6 | 1.463 | 205 | 57 | 43 | 132 | 78.24% | 75.43% | 262 | 175 | 0.657 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |
| AT4G02070 | MSH6 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.59 x 10-3 | 1.231 | 133 | 30 | 106 | 36 | 81.60% | 25.35% | 163 | 142 | 6.047 | 6.08 x 10-23 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' |
| AT4G02070 | MSH6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.107 | 20 | 20 | 37 | 70 | 50.00% | 65.42% | 40 | 107 | 0.239 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | ||
| AT4G02070 | MSH6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 7 | 100.00% | 0 | 7 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |||
| AT4G02070 | MSH6 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 20 | 0 | 49 | 0 | 100.00% | 0.00% | 20 | 49 | 66.41 | 1.92 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.16' | |
| AT4G02060 | PRL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.453 | 389 | 246 | 214 | 476 | 61.26% | 68.99% | 635 | 690 | 1.021 | 0.0105 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.29 | |
| AT4G02060 | PRL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.847 | 498 | 282 | 514 | 1125 | 63.85% | 68.64% | 780 | 1639 | 0.0 | 0.047 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | |
| AT4G02060 | PRL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.02 x 10-7 | 1.3 | 287 | 104 | 233 | 638 | 73.40% | 73.25% | 391 | 871 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | |
| AT4G02060 | PRL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 1707 | 681 | 342 | 554 | 71.48% | 61.83% | 2388 | 896 | 1.237 | 1.3 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | |
| AT4G02060 | PRL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 4.97 x 10-4 | 1.078 | 889 | 444 | 335 | 482 | 66.69% | 59.00% | 1333 | 817 | 1.08 | 6.47 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' |
| AT4G02060 | PRL | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0297 | 0.0 | 415 | 146 | 148 | 283 | 73.98% | 65.66% | 561 | 431 | 1.01 | 8.51 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' |
| AT4G02060 | PRL | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.947 | 30 | 25 | 70 | 200 | 54.55% | 74.07% | 55 | 270 | 1.074 | 0.0155 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | |
| AT4G02060 | PRL | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 3 | 11 | 78.57% | 0 | 14 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | |||
| AT4G02060 | PRL | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 49 | 0 | 0.00% | 0 | 49 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.29' | |||
| AT4G02055 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | ||||||
| AT4G02055 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02055 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02055 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02055 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02055 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02055 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02055 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02055 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02050 | STP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 6.58 x 10-5 | 1.504 | 54 | 7 | 45 | 107 | 88.52% | 70.39% | 61 | 152 | 1.064 | 0.0148 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: 1.79 |
| AT4G02050 | STP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.15 x 10-16 | 4.848 | 70 | 2 | 112 | 286 | 97.22% | 71.86% | 72 | 398 | 2.974 | 9.82 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.79' |
| AT4G02050 | STP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.19 x 10-4 | 1.184 | 112 | 24 | 40 | 91 | 82.35% | 69.47% | 136 | 131 | 0.0 | 0.0212 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.79' |
| AT4G02050 | STP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.79' | ||||
| AT4G02050 | STP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.79' | ||||
| AT4G02050 | STP7 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.79' | ||||
| AT4G02050 | STP7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0 | 3.828 | 300 | 49 | 159 | 639 | 85.96% | 80.08% | 349 | 798 | 0.0 | 0.0486 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.79' |
| AT4G02050 | STP7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.44 x 10-12 | 6.217 | 24 | 0 | 15 | 102 | 100.00% | 87.18% | 24 | 117 | 0.101 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.79' | |
| AT4G02050 | STP7 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.33 x 10-8 | 2.957 | 88 | 0 | 39 | 32 | 100.00% | 45.07% | 88 | 71 | 17.566 | 1.63 x 10-17 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '1.79' |
| AT4G02040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.43 | 8 | 1 | 5 | 11 | 88.89% | 68.75% | 9 | 16 | 0.551 | TAIR10 | ||||
| AT4G02040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 17 | 4 | 19.05% | 0 | 21 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G02040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.671 | 23 | 17 | 7 | 11 | 57.50% | 61.11% | 40 | 18 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.0 | 0 | 11 | 0 | 19 | 0.00% | 100.00% | 11 | 19 | 14.163 | 4.69 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02040 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02040 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.278 | 22 | 3 | 12 | 17 | 88.00% | 58.62% | 25 | 29 | 0.0729 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02040 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 34 | 0 | 0 | 0 | 100.00% | 34 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G02040 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.114 | 12 | 3 | 9 | 34 | 80.00% | 79.07% | 15 | 43 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.5 | |||
| AT4G02030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 2.98 x 10-4 | 1.39 | 12 | 0 | 14 | 45 | 100.00% | 76.27% | 12 | 59 | 0.187 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | ||
| AT4G02030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | MEG | not imprinted | 0.0 | 20.967 | 63 | 0 | 17 | 143 | 100.00% | 89.38% | 63 | 160 | 1.185 | 5.95 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | |
| AT4G02030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.12 | 163 | 70 | 44 | 118 | 69.96% | 72.84% | 233 | 162 | 0.813 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | |||
| AT4G02030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.018 | 0.0 | 42 | 34 | 23 | 29 | 55.26% | 55.77% | 76 | 52 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | ||
| AT4G02030 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | MEG | not imprinted | 4.55 x 10-20 | 9.23 | 59 | 1 | 13 | 83 | 98.33% | 86.46% | 60 | 96 | 0.0 | 0.0165 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | |
| AT4G02030 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.293 | 42 | 29 | 57 | 100 | 59.15% | 63.69% | 71 | 157 | 0.734 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | |||
| AT4G02030 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 7.07 x 10-5 | 1.565 | 178 | 91 | 1 | 24 | 66.17% | 96.00% | 269 | 25 | 1.636 | 1.97 x 10-3 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | |
| AT4G02030 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0299 | 0.0 | 392 | 64 | 213 | 199 | 85.96% | 48.30% | 456 | 412 | 4.154 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.5' | |
| AT4G02020 | SWN | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.849 | 96 | 50 | 167 | 309 | 65.75% | 64.92% | 146 | 476 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.89 | ||
| AT4G02020 | SWN | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.453 | 261 | 120 | 241 | 505 | 68.50% | 67.69% | 381 | 746 | 0.96 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | ||
| AT4G02020 | SWN | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.82 x 10-4 | 1.185 | 224 | 193 | 119 | 229 | 53.72% | 65.80% | 417 | 348 | 1.097 | 0.0014 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' |
| AT4G02020 | SWN | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | ||||
| AT4G02020 | SWN | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | ||||
| AT4G02020 | SWN | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | ||||
| AT4G02020 | SWN | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 5.98 x 10-4 | 1.129 | 229 | 78 | 121 | 297 | 74.59% | 71.05% | 307 | 418 | 0.483 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | |
| AT4G02020 | SWN | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 1.02 x 10-14 | 13.722 | 15 | 0 | 0 | 54 | 100.00% | 100.00% | 15 | 54 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | |
| AT4G02020 | SWN | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.22 x 10-4 | 1.393 | 18 | 1 | 0 | 7 | 94.74% | 100.00% | 19 | 7 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.89' | |
| AT4G02010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 37 | 15 | 14 | 25 | 71.15% | 64.10% | 52 | 39 | 0.694 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.45 | |||
| AT4G02010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.05 x 10-3 | 1.154 | 58 | 16 | 30 | 99 | 78.38% | 76.74% | 74 | 129 | 0.981 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | ||
| AT4G02010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 3.13 x 10-11 | 4.712 | 31 | 0 | 21 | 79 | 100.00% | 79.00% | 31 | 100 | 1.332 | 5.49 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |
| AT4G02010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.402 | 155 | 60 | 38 | 83 | 72.09% | 68.60% | 215 | 121 | 0.776 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |||
| AT4G02010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.135 | 46 | 50 | 27 | 70 | 47.92% | 72.16% | 96 | 97 | 1.219 | 1.21 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | ||
| AT4G02010 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0722 | 135 | 55 | 53 | 50 | 71.05% | 48.54% | 190 | 103 | 1.297 | 4.37 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | ||
| AT4G02010 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |||||
| AT4G02010 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |||||
| AT4G02010 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.45' | |||||
| AT4G02005 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | not imprinted | 1.0 | 0 | 0 | 0 | 6 | 100.00% | 0 | 6 | 1.0 | TAIR10 | |||||
| AT4G02005 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.697 | 3 | 0 | 33 | 25 | 100.00% | 43.10% | 3 | 58 | 0.165 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02005 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 5.89 x 10-5 | 1.333 | 40 | 0 | 20 | 19 | 100.00% | 48.72% | 40 | 39 | 5.908 | 6.3 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02005 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.45 | 25 | 3 | 4 | 6 | 89.29% | 60.00% | 28 | 10 | 0.168 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02005 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 2.06 x 10-10 | 4.536 | 25 | 13 | 0 | 70 | 65.79% | 100.00% | 38 | 70 | 4.906 | 6.12 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02005 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.272 | 48 | 18 | 61 | 130 | 72.73% | 68.06% | 66 | 191 | 0.64 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02005 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0146 | 0.0 | 69 | 4 | 30 | 29 | 94.52% | 49.15% | 73 | 59 | 4.084 | 1.56 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02005 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | MEG | not imprinted | 2.66 x 10-12 | 9.013 | 38 | 0 | 0 | 14 | 100.00% | 100.00% | 38 | 14 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02005 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.9 x 10-4 | 1.098 | 41 | 0 | 17 | 14 | 100.00% | 45.16% | 41 | 31 | 6.479 | 3.12 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | 1.0 | TAIR10 | |||||
| AT4G02000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 2 | 0 | 4 | 0 | 100.00% | 0.00% | 2 | 4 | 0.127 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02000 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02000 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 1.0 | 24 | 0 | 5 | 0 | 100.00% | 0.00% | 24 | 5 | 8.132 | 3.65 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02000 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02000 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G01995 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.444 | 47 | 38 | 59 | 139 | 55.29% | 70.20% | 85 | 198 | 0.0523 | TAIR10 | ||||
| AT4G01995 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 16 | 9 | 62 | 146 | 64.00% | 70.19% | 25 | 208 | 0.644 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G01995 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 4.46 x 10-5 | 1.562 | 34 | 0 | 23 | 28 | 100.00% | 54.90% | 34 | 51 | 4.216 | 1.41 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' |