| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G02790 | EMB3129 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.197 | 314 | 165 | 113 | 176 | 65.55% | 60.90% | 479 | 289 | 0.424 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | ||
| AT4G02790 | EMB3129 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.37 x 10-4 | 1.21 | 85 | 12 | 27 | 53 | 87.63% | 66.25% | 97 | 80 | 1.257 | 1.53 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' |
| AT4G02790 | EMB3129 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 6.27 x 10-7 | 1.988 | 91 | 70 | 53 | 40 | 56.52% | 43.01% | 161 | 93 | 0.0734 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | |
| AT4G02790 | EMB3129 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | ||||
| AT4G02790 | EMB3129 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | ||||
| AT4G02790 | EMB3129 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.53' | ||||
| AT4G02780 | GA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | paternally biased | not imprinted | 9.68 x 10-5 | 6.244 | 1 | 25 | 11 | 14 | 3.85% | 56.00% | 26 | 25 | 2.529 | 1.84 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -.81 |
| AT4G02780 | GA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.349 | 8 | 5 | 32 | 34 | 61.54% | 51.52% | 13 | 66 | 0.698 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.81' | ||
| AT4G02780 | GA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 7.21 x 10-4 | 2.911 | 0 | 34 | 5 | 24 | 0.00% | 82.76% | 34 | 29 | 16.768 | 2.58 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.81' |
| AT4G02780 | GA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.102 | 29 | 50 | 35 | 115 | 36.71% | 76.67% | 79 | 150 | 2.471 | 4.59 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.81' | |
| AT4G02780 | GA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0488 | 0.0 | 10 | 36 | 0 | 35 | 21.74% | 100.00% | 46 | 35 | 16.501 | 1.56 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.81' |
| AT4G02780 | GA1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.0991 | 29 | 17 | 82 | 101 | 63.04% | 55.19% | 46 | 183 | 0.496 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.81' | ||
| AT4G02780 | GA1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.565 | 172 | 58 | 91 | 102 | 74.78% | 52.85% | 230 | 193 | 1.484 | 1.69 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.81' | |
| AT4G02780 | GA1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0661 | 103 | 16 | 35 | 8 | 86.55% | 18.60% | 119 | 43 | 7.901 | 4.12 x 10-15 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.81' | |
| AT4G02780 | GA1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 8.07 x 10-8 | 1.833 | 253 | 78 | 159 | 62 | 76.44% | 28.05% | 331 | 221 | 4.82 | 2.3 x 10-29 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-.81' |
| AT4G02770 | PSAD-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0156 | 1.065 | 88 | 51 | 48 | 50 | 63.31% | 51.02% | 139 | 98 | 0.138 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.97 | |
| AT4G02770 | PSAD-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.57 | 109 | 33 | 647 | 923 | 76.76% | 58.79% | 142 | 1570 | 1.422 | 9.51 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.97' | |
| AT4G02770 | PSAD-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 2.04 x 10-12 | 4.124 | 702 | 462 | 56 | 19 | 60.31% | 25.33% | 1164 | 75 | 2.38 | 1.04 x 10-8 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.97' |
| AT4G02770 | PSAD-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.763 | 7782 | 3381 | 1584 | 2684 | 69.71% | 62.89% | 11163 | 4268 | 1.226 | 1.29 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.97' | |
| AT4G02770 | PSAD-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.413 | 2465 | 1170 | 802 | 1601 | 67.81% | 66.63% | 3635 | 2403 | 0.416 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.97' | ||
| AT4G02770 | PSAD-1 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.73 x 10-3 | 1.03 | 1054 | 594 | 422 | 741 | 63.96% | 63.71% | 1648 | 1163 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.97' | |
| AT4G02770 | PSAD-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 2900 | 1432 | 2469 | 4846 | 66.94% | 66.25% | 4332 | 7315 | 0.632 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.97' | ||
| AT4G02770 | PSAD-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | paternally biased | not imprinted | 1.11 x 10-3 | 2.309 | 536 | 201 | 23 | 5 | 72.73% | 17.86% | 737 | 28 | 4.104 | 1.46 x 10-8 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.97' |
| AT4G02770 | PSAD-1 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.303 | 466 | 190 | 250 | 466 | 71.04% | 65.08% | 656 | 716 | 0.0 | 0.0248 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.97' | |
| AT4G02760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 45 | 25 | 53 | 123 | 64.29% | 69.89% | 70 | 176 | 0.64 | TAIR10 | ||||
| AT4G02760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 2.07 x 10-12 | 2.414 | 105 | 17 | 114 | 365 | 86.07% | 76.20% | 122 | 479 | 0.0 | 0.0445 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.93 | 196 | 111 | 95 | 208 | 63.84% | 68.65% | 307 | 303 | 0.28 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.822 | 269 | 86 | 108 | 151 | 75.77% | 58.30% | 355 | 259 | 1.373 | 4.71 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 1.02 x 10-3 | 1.111 | 198 | 105 | 135 | 162 | 65.35% | 54.55% | 303 | 297 | 0.0 | 0.0117 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02760 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 0.104 | 80 | 40 | 86 | 256 | 66.67% | 74.85% | 120 | 342 | 0.133 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02760 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 210 | 150 | 140 | 394 | 58.33% | 73.78% | 360 | 534 | 1.345 | 9.37 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02760 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | maternally biased | not imprinted | 8.29 x 10-19 | 2.59 | 245 | 46 | 76 | 261 | 84.19% | 77.45% | 291 | 337 | 0.0 | 0.0486 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02760 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 4.81 x 10-18 | 2.294 | 406 | 263 | 216 | 171 | 60.69% | 44.19% | 669 | 387 | 1.367 | 4.08 x 10-7 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02750 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: .5 | |||||
| AT4G02750 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | |||||
| AT4G02750 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | |||||
| AT4G02750 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 5 | 2 | 5 | 9 | 71.43% | 64.29% | 7 | 14 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | |||
| AT4G02750 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 0 | 21 | 100.00% | 0 | 21 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | ||||
| AT4G02750 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | |||||
| AT4G02750 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.789 | 14 | 8 | 8 | 27 | 63.64% | 77.14% | 22 | 35 | 0.539 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | |||
| AT4G02750 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 35 | 0 | 0 | 0.00% | 35 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | ||||
| AT4G02750 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 17 | 0 | 0 | 0 | 100.00% | 17 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '.5' | ||||
| AT4G02740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.275 | 100 | 27 | 150 | 113 | 78.74% | 42.97% | 127 | 263 | 2.527 | 1.62 x 10-10 | TAIR10 | |||
| AT4G02740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.0 | 129 | 29 | 198 | 180 | 81.65% | 47.62% | 158 | 378 | 2.681 | 7.49 x 10-13 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 6.41 x 10-5 | 1.218 | 247 | 21 | 206 | 163 | 92.16% | 44.17% | 268 | 369 | 7.783 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 226 | 73 | 83 | 101 | 75.59% | 54.89% | 299 | 184 | 1.464 | 2.62 x 10-5 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.0551 | 364 | 70 | 274 | 285 | 83.87% | 50.98% | 434 | 559 | 3.282 | 1.71 x 10-27 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02740 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.15 x 10-12 | 1.999 | 242 | 108 | 336 | 201 | 69.14% | 37.43% | 350 | 537 | 2.509 | 1.11 x 10-19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02740 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | no data | no data | 1.0 | 0 | 6 | 0 | 10 | 0.00% | 100.00% | 6 | 10 | 4.066 | 4.69 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02740 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02740 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | no data | 1.0 | 56 | 0 | 186 | 0 | 100.00% | 0.00% | 56 | 186 | 705.844 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02733 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | PEG | PEG | 1.19 x 10-9 | 49.683 | 0 | 11 | 65 | 7 | 0.00% | 9.72% | 11 | 72 | 0.775 | TAIR10 | |||
| AT4G02733 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | PEG | PEG | 4.5 x 10-9 | 32.264 | 1 | 10 | 112 | 13 | 9.09% | 10.40% | 11 | 125 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02733 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | PEG | 1.0 | 0 | 0 | 139 | 15 | 9.74% | 0 | 154 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G02733 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | no data | no data | 0.0132 | 3.955 | 5 | 9 | 6 | 0 | 35.71% | 0.00% | 14 | 6 | 0.483 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02733 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | no data | no data | 1.0 | 0 | 0 | 33 | 35 | 51.47% | 0 | 68 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G02733 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | no data | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||||
| AT4G02733 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | no data | 0.0133 | 1.989 | 2 | 12 | 60 | 134 | 14.29% | 69.07% | 14 | 194 | 2.48 | 2.81 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02733 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | no data | 1.0 | 0 | 0 | 15 | 75 | 83.33% | 0 | 90 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G02733 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | no data | no data | 1.0 | 0 | 28 | 0 | 0 | 0.00% | 28 | 0 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G02730 | WDR5b | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 29 | 17 | 51 | 113 | 63.04% | 68.90% | 46 | 164 | 0.671 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.06 | ||
| AT4G02730 | WDR5b | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 3.39 x 10-4 | 1.303 | 84 | 61 | 116 | 146 | 57.93% | 55.73% | 145 | 262 | 0.811 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |
| AT4G02730 | WDR5b | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.79 x 10-9 | 3.515 | 61 | 0 | 28 | 40 | 100.00% | 58.82% | 61 | 68 | 6.889 | 1.63 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' |
| AT4G02730 | WDR5b | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.257 | 79 | 76 | 30 | 72 | 50.97% | 70.59% | 155 | 102 | 1.106 | 0.0086 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |
| AT4G02730 | WDR5b | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 0.265 | 78 | 0 | 20 | 1 | 100.00% | 4.76% | 78 | 21 | 69.265 | 2.74 x 10-19 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |
| AT4G02730 | WDR5b | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | maternally biased | not imprinted | 2.39 x 10-12 | 5.237 | 75 | 0 | 26 | 45 | 100.00% | 63.38% | 75 | 71 | 6.992 | 1.49 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' |
| AT4G02730 | WDR5b | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.0 | 191 | 51 | 112 | 121 | 78.93% | 51.93% | 242 | 233 | 1.972 | 3.09 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' | |
| AT4G02730 | WDR5b | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.0261 | 0.0 | 109 | 24 | 52 | 85 | 81.95% | 62.04% | 133 | 137 | 1.271 | 7.12 x 10-4 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' |
| AT4G02730 | WDR5b | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | paternally biased | not imprinted | 1.53 x 10-5 | 6.024 | 200 | 38 | 43 | 0 | 84.03% | 0.00% | 238 | 43 | 41.719 | 4.75 x 10-28 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.06' |
| AT4G02725 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.218 | 194 | 131 | 219 | 472 | 59.69% | 68.31% | 325 | 691 | 0.0 | 0.0254 | TAIR10 | |||
| AT4G02725 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.387 | 72 | 33 | 280 | 653 | 68.57% | 69.99% | 105 | 933 | 0.946 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02725 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.802 | 199 | 47 | 71 | 73 | 80.89% | 50.69% | 246 | 144 | 2.168 | 2.14 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02725 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0505 | 516 | 442 | 167 | 435 | 53.86% | 72.26% | 958 | 602 | 1.644 | 4.76 x 10-12 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02725 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | maternally biased | not imprinted | 1.44 x 10-15 | 6.461 | 123 | 48 | 0 | 54 | 71.93% | 100.00% | 171 | 54 | 3.936 | 1.15 x 10-6 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02725 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.98 x 10-4 | 1.255 | 137 | 78 | 121 | 130 | 63.72% | 51.79% | 215 | 251 | 0.0 | 0.0181 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02725 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.455 | 133 | 74 | 77 | 210 | 64.25% | 73.17% | 207 | 287 | 0.0862 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02725 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | no data | not imprinted | 1.0 | 0 | 19 | 0 | 0 | 0.00% | 19 | 0 | 1.0 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||||
| AT4G02725 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | PEG | not imprinted | 4.55 x 10-10 | 89.45 | 0 | 15 | 22 | 0 | 0.00% | 0.00% | 15 | 22 | 1.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0804 | 564 | 259 | 594 | 896 | 68.53% | 60.13% | 823 | 1490 | 1.124 | 2.75 x 10-4 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.01 | ||
| AT4G02720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.39 x 10-9 | 1.238 | 1141 | 347 | 883 | 1628 | 76.68% | 64.83% | 1488 | 2511 | 1.457 | 2.52 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.01' | |
| AT4G02720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 0.0 | 5.788 | 1430 | 83 | 285 | 551 | 94.51% | 65.91% | 1513 | 836 | 6.194 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.01' | |
| AT4G02720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0017 | 1.052 | 1642 | 651 | 462 | 943 | 71.61% | 67.12% | 2293 | 1405 | 1.01 | 0.0166 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.01' | |
| AT4G02720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.0 x 10-29 | 1.63 | 1658 | 624 | 635 | 1869 | 72.66% | 74.64% | 2282 | 2504 | 0.16 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.01' | ||
| AT4G02720 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 1.0 | 609 | 278 | 473 | 859 | 68.66% | 64.49% | 887 | 1332 | 0.0648 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.01' | |||
| AT4G02720 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.0305 | 0.0 | 1268 | 415 | 831 | 1292 | 75.34% | 60.86% | 1683 | 2123 | 1.612 | 1.83 x 10-20 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.01' | |
| AT4G02720 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 1.72 x 10-8 | 1.418 | 379 | 191 | 349 | 360 | 66.49% | 50.78% | 570 | 709 | 1.396 | 4.42 x 10-8 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.01' | |
| AT4G02720 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.0232 | 0.0 | 898 | 203 | 448 | 311 | 81.56% | 40.97% | 1101 | 759 | 4.736 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.01' | |
| AT4G02715 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.918 | 194 | 91 | 183 | 365 | 68.07% | 66.61% | 285 | 548 | 0.881 | TAIR10 | ||||
| AT4G02715 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 0.795 | 295 | 135 | 598 | 1148 | 68.60% | 65.75% | 430 | 1746 | 0.409 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02715 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 2.53 x 10-28 | 3.023 | 648 | 36 | 294 | 323 | 94.74% | 52.35% | 684 | 617 | 10.018 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02715 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 1.0 | 728 | 350 | 216 | 413 | 67.53% | 65.66% | 1078 | 629 | 0.702 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |||
| AT4G02715 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 4 vs 4 | not imprinted | not imprinted | 2.69 x 10-7 | 1.306 | 497 | 146 | 171 | 378 | 77.29% | 68.85% | 643 | 549 | 1.069 | 2.08 x 10-3 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02715 | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 5 vs 5 | not imprinted | not imprinted | 2.53 x 10-11 | 1.603 | 365 | 117 | 147 | 448 | 75.73% | 75.29% | 482 | 595 | 0.997 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | ||
| AT4G02715 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 1.56 x 10-8 | 1.423 | 582 | 108 | 235 | 359 | 84.35% | 60.44% | 690 | 594 | 2.438 | 4.14 x 10-21 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02715 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.63 x 10-4 | 1.096 | 331 | 91 | 180 | 328 | 78.44% | 64.57% | 422 | 508 | 1.321 | 7.51 x 10-6 | TAIR 10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02715 | endosperm | Pignatta et al. 2014 | A. thaliana Ler | A. thaliana Cvi | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 2.63 x 10-11 | 1.812 | 551 | 150 | 333 | 137 | 78.60% | 29.15% | 701 | 470 | 6.113 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '' | |
| AT4G02710 | NET1C | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 1 vs 1 | not imprinted | not imprinted | 0.837 | 230 | 79 | 1159 | 1496 | 74.43% | 56.35% | 309 | 2655 | 1.619 | 4.3 x 10-9 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: -1.53 | |
| AT4G02710 | NET1C | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 2 vs 2 | not imprinted | not imprinted | 4.06 x 10-6 | 1.298 | 266 | 58 | 2088 | 3314 | 82.10% | 61.35% | 324 | 5402 | 2.061 | 4.38 x 10-14 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.53' |
| AT4G02710 | NET1C | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Cvi | 6 DAP | 3 vs 3 | maternally biased | not imprinted | 1.02 x 10-20 | 5.403 | 245 | 1 | 1455 | 795 | 99.59% | 35.33% | 246 | 2250 | 72.393 | 0.0 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.53' |
| AT4G02710 | NET1C | endosperm | Pignatta et al. 2014 | A. thaliana Col | A. thaliana Ler | 6 DAP | 3 vs 3 | not imprinted | not imprinted | 0.308 | 896 | 463 | 198 | 347 | 65.93% | 63.67% | 1359 | 545 | 0.606 | TAIR10 | log2(seedcoat) - log2(endosperm) expression from Belmonte et al. 2013: '-1.53' |