| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G24660 | LSU2 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.071' | ||||
| AT5G24660 | LSU2 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.056' | ||||
| AT5G24655 | LSU4 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.241' | ||||
| AT5G24655 | LSU4 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.248' | ||||
| AT5G24650 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.957 | 36 | 23 | 37 | 21 | 61.02% | 36.21% | 59 | 58 | 0.0 | 0.0383 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.474' | ||
| AT5G24650 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.266 | 46 | 22 | 17 | 58 | 67.65% | 77.33% | 68 | 75 | 0.454 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.26' | |||
| AT5G24640 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT5G24640 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT5G24630 | BIN4 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.481 | 10 | 9 | 13 | 22 | 52.63% | 62.86% | 19 | 35 | 0.766 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | ||
| AT5G24630 | BIN4 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0915 | 10 | 22 | 32 | 18 | 31.25% | 36.00% | 32 | 50 | 0.839 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | ||
| AT5G24620 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.649 | 15 | 3 | 2 | 4 | 83.33% | 66.67% | 18 | 6 | 0.689 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '1.48' | |||
| AT5G24620 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.762 | 17 | 15 | 15 | 21 | 53.12% | 58.33% | 32 | 36 | 0.844 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '1.206' | |||
| AT5G24610 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 3.88 x 10-3 | 1.087 | 28 | 8 | 10 | 52 | 77.78% | 83.87% | 36 | 62 | 0.747 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '2.175' | ||
| AT5G24610 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.824 | 50 | 62 | 61 | 92 | 44.64% | 60.13% | 112 | 153 | 0.0605 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.695' | |||
| AT5G24600 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.136 | 56 | 40 | 53 | 83 | 58.33% | 61.03% | 96 | 136 | 0.89 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.657' | |||
| AT5G24600 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.488 | 111 | 113 | 177 | 236 | 49.55% | 57.14% | 224 | 413 | 0.209 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.871' | |||
| AT5G24593 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT5G24593 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT5G24590 | TIP | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 4.1 x 10-5 | 1.229 | 397 | 101 | 198 | 366 | 79.72% | 64.89% | 498 | 564 | 1.439 | 1.5 x 10-6 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '1.011' |
| AT5G24590 | TIP | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.111 | 481 | 314 | 467 | 402 | 60.50% | 46.26% | 795 | 869 | 1.351 | 1.11 x 10-7 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '1.664' | |
| AT5G24580 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.0167 | 0.0 | 2 | 0 | 0 | 15 | 100.00% | 100.00% | 2 | 15 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '6.499' | ||
| AT5G24580 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.505 | 8 | 1 | 8 | 6 | 88.89% | 42.86% | 9 | 14 | 0.11 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '7.109' | |||
| AT5G24570 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.65 x 10-3 | 1.016 | 3 | 0 | 0 | 20 | 100.00% | 100.00% | 3 | 20 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '4.105' | ||
| AT5G24570 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.602 | 2 | 7 | 1 | 18 | 22.22% | 94.74% | 9 | 19 | 2.529 | 9.43 x 10-4 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '4.105' | ||
| AT5G24560 | PP2-B12 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.033' | ||||
| AT5G24560 | PP2-B12 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.103' | ||||
| AT5G24550 | BGLU32 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.001' | ||||
| AT5G24550 | BGLU32 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.001' | ||||
| AT5G24540 | BGLU31 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '0' | ||||
| AT5G24540 | BGLU31 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '0' | ||||
| AT5G24530 | DMR6 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | 0.773 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.44' | ||
| AT5G24530 | DMR6 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 21 | 8 | 40 | 16 | 72.41% | 28.57% | 29 | 56 | 1.675 | 8.23 x 10-4 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.44' | |
| AT5G24520 | TTG1 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.533' | ||||
| AT5G24520 | TTG1 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.593' | ||||
| AT5G24510 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-4.869' | |||||
| AT5G24510 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.853' | |||||
| AT5G24500 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0172 | 0.0 | 36 | 10 | 15 | 54 | 78.26% | 78.26% | 46 | 69 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.249' | ||
| AT5G24500 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.923 | 25 | 34 | 29 | 46 | 42.37% | 61.33% | 59 | 75 | 0.115 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.001' | |||
| AT5G24490 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.134' | |||||
| AT5G24490 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-2.352' | |||||
| AT5G24480 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.078' | |||||
| AT5G24480 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.026' | |||||
| AT5G24470 | PRR5 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.878 | 89 | 40 | 48 | 95 | 68.99% | 66.43% | 129 | 143 | 0.88 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.142' | ||
| AT5G24470 | PRR5 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.907 | 720 | 568 | 992 | 813 | 55.90% | 45.04% | 1288 | 1805 | 1.263 | 5.12 x 10-8 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.028' | |
| AT5G24460 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.573 | 25 | 12 | 4 | 15 | 67.57% | 78.95% | 37 | 19 | 0.67 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.283' | |||
| AT5G24460 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0891 | 23 | 9 | 11 | 21 | 71.88% | 65.62% | 32 | 32 | 0.849 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.381' | |||
| AT5G24450 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.699 | 61 | 17 | 31 | 45 | 78.21% | 59.21% | 78 | 76 | 0.0576 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.891' | |||
| AT5G24450 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.709 | 24 | 33 | 37 | 35 | 42.11% | 48.61% | 57 | 72 | 0.708 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '1.135' | |||
| AT5G24440 | CID13 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 20 | 1 | 9 | 1 | 95.24% | 10.00% | 21 | 10 | 5.029 | 2.3 x 10-5 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-3.753' | |
| AT5G24440 | CID13 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.031' | |||
| AT5G24430 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0998 | 186 | 110 | 156 | 259 | 62.84% | 62.41% | 296 | 415 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.349' | |||
| AT5G24430 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0334 | 1.119 | 122 | 83 | 119 | 152 | 59.51% | 56.09% | 205 | 271 | 0.701 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '1.764' | ||
| AT5G24420 | PGL5 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 0 | 4 | 0 | 10 | 0.00% | 100.00% | 4 | 10 | 2.711 | 2.27 x 10-3 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.705' | |
| AT5G24420 | PGL5 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.518' | ||||
| AT5G24410 | PGL4 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.749' | ||||
| AT5G24410 | PGL4 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.749' | ||||
| AT5G24400 | EMB2024 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.717 | 33 | 18 | 12 | 36 | 64.71% | 75.00% | 51 | 48 | 0.535 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.812' | ||
| AT5G24400 | EMB2024 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 20 | 34 | 34 | 56 | 37.04% | 62.22% | 54 | 90 | 1.063 | 0.0207 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-1.48' | |
| AT5G24390 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.56 x 10-4 | 1.743 | 22 | 0 | 5 | 16 | 100.00% | 76.19% | 22 | 21 | 0.091 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-2.11' | ||
| AT5G24390 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.969 | 4 | 1 | 2 | 1 | 80.00% | 33.33% | 5 | 3 | 0.45 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.86' | |||
| AT5G24380 | YSL2 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.254 | 42 | 12 | 14 | 32 | 77.78% | 69.57% | 54 | 46 | 0.642 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.175' | ||
| AT5G24380 | YSL2 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.247 | 14 | 7 | 3 | 9 | 66.67% | 75.00% | 21 | 12 | 0.826 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.4' | ||
| AT5G24370 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||||
| AT5G24370 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||||
| AT5G24360 | IRE1-1 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.506 | 163 | 64 | 135 | 174 | 71.81% | 56.31% | 227 | 309 | 1.184 | 2.33 x 10-3 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-1.8' | |
| AT5G24360 | IRE1-1 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.869 | 88 | 81 | 131 | 136 | 52.07% | 50.94% | 169 | 267 | 0.935 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.249' | ||
| AT5G24355 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 18 | 0 | 20 | 0 | 100.00% | 0.00% | 18 | 20 | 24.396 | 2.1 x 10-10 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | ||
| AT5G24355 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | ||||
| AT5G24352 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.325 | 15 | 1 | 3 | 4 | 93.75% | 57.14% | 16 | 7 | 0.172 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |||
| AT5G24352 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.864 | 0 | 2 | 1 | 2 | 0.00% | 66.67% | 2 | 3 | 0.469 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||
| AT5G24350 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0724 | 46 | 13 | 18 | 48 | 77.97% | 72.73% | 59 | 66 | 0.779 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.187' | |||
| AT5G24350 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.0333 | 1.202 | 59 | 25 | 43 | 52 | 70.24% | 54.74% | 84 | 95 | 0.126 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.508' | ||
| AT5G24340 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.093' | |||||
| AT5G24340 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | 0.727 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.211' | |||
| AT5G24330 | ATXR6 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.86 | 1 | 1 | 1 | 0 | 50.00% | 0.00% | 2 | 1 | 0.881 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-1.301' | ||
| AT5G24330 | ATXR6 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.866 | 2 | 0 | 1 | 1 | 100.00% | 50.00% | 2 | 2 | 0.753 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-3.226' | ||
| AT5G24320 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.001' | |||||
| AT5G24320 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '0' | |||||
| AT5G24318 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.538 | 29 | 8 | 24 | 14 | 78.38% | 36.84% | 37 | 38 | 1.515 | 2.06 x 10-3 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | ||
| AT5G24318 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.642 | 11 | 3 | 19 | 13 | 78.57% | 40.62% | 14 | 32 | 0.0815 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | |||
| AT5G24316 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 2.18 x 10-3 | 1.26 | 73 | 83 | 97 | 201 | 46.79% | 67.45% | 156 | 298 | 1.353 | 2.34 x 10-4 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-4.014' | |
| AT5G24316 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.403 | 3 | 5 | 2 | 20 | 37.50% | 90.91% | 8 | 22 | 1.143 | 0.0183 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '2.922' | ||
| AT5G24314 | PTAC7 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.186 | 113 | 24 | 31 | 48 | 82.48% | 60.76% | 137 | 79 | 1.255 | 3.79 x 10-3 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '' | |
| AT5G24314 | PTAC7 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.829 | 165 | 181 | 196 | 192 | 47.69% | 49.48% | 346 | 388 | 0.825 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '' | ||
| AT5G24313 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.013' | |||||
| AT5G24313 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.013' | |||||
| AT5G24310 | ABIL3 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 3 | 0 | 0 | 0.00% | 3 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.016' | |||
| AT5G24310 | ABIL3 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 6 | 9 | 16 | 25 | 40.00% | 60.98% | 15 | 41 | 0.39 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.229' | ||
| AT5G24300 | SS1 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.255 | 1215 | 386 | 915 | 1305 | 75.89% | 58.78% | 1601 | 2220 | 1.809 | 1.1 x 10-26 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.887' | |
| AT5G24300 | SS1 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.268 | 572 | 442 | 668 | 622 | 56.41% | 48.22% | 1014 | 1290 | 1.101 | 9.05 x 10-4 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.389' | |
| AT5G24290 | MEB2 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.062' | ||||
| AT5G24290 | MEB2 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.077' | ||||
| AT5G24280 | GMI1 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.181 | 31 | 18 | 25 | 26 | 63.27% | 50.98% | 49 | 51 | 0.472 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.312' | ||
| AT5G24280 | GMI1 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 1.0 | 3 | 3 | 5 | 5 | 50.00% | 50.00% | 6 | 10 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.548' | ||
| AT5G24270 | SOS3 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '.011' | ||||
| AT5G24270 | SOS3 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.022' | ||||
| AT5G24260 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.513 | 87 | 40 | 70 | 166 | 68.50% | 70.34% | 127 | 236 | 0.919 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.298' | |||
| AT5G24260 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | not imprinted | 0.841 | 68 | 53 | 95 | 88 | 56.20% | 48.09% | 121 | 183 | 0.385 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '-.002' | |||
| AT5G24250 | endosperm | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 0.197 | 3 | 0 | 0 | 2 | 100.00% | 100.00% | 3 | 2 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and endosperm expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than endosperm):: '-.057' | |||
| AT5G24250 | embryo | Gehring et al. 2011 | A. thaliana Col | A. thaliana Ler | 6 or 7 DAP (torpedo stage) | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | TAIR9 | GCRMA normalized difference between seed coat and embryo expression (Le et al. 2010) (1 == seedcoat expression is 2x higher than embryo): '.005' |